Sus scrofa (pig): 100517735
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Entry
100517735 CDS
T01009
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssc01100
Metabolic pathways
Module
ssc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100517735
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100517735
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
100517735
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100517735
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
O-Glycan
100517735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
DUF4618
Motif
Other DBs
NCBI-GeneID:
100517735
NCBI-ProteinID:
XP_020933335
LinkDB
All DBs
Position
17:8795457..8841309
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AA seq
310 aa
AA seq
DB search
MLRRGLLAWVSRVGVLLVLLCCAVSVLYMLACTPRGDSERRGLPGASGPTGRAGYQAALQ
EWEEQHRGYVGSLQRQIAQLKEELQERSAQLRTAQHLAGDPAGSPERAQADLLAFLRSQV
DRAEVHAGVKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIQSAV
EALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRGDHKHQFRRLVLFRPFGPI
MKVKKEELNMGSTLVNIIVPLARRVDKFRQFMQNFREMCIQQDGRVHLTVVYFGKEEMNE
VKGILENTSR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgccggggactcctcgcctgggtctcccgggtgggcgtcctgctcgtgctcctc
tgttgcgctgtctccgtcctctacatgctggcctgcaccccgagaggtgacagtgagcgg
cgggggctgcccggggccagcggccccaccggacgggccgggtaccaggcggcactgcag
gagtgggaggagcagcaccggggctacgtgggcagcctgcagaggcagatcgcacagctc
aaggaggagctgcaggagcggagcgcgcagctcaggactgcacagcacttggcgggcgac
cccgcgggctcccccgagagggcccaggccgacctgctggctttcctgcgctcccaggtg
gacagggcagaggtgcatgccggcgtcaagcaggccaccgagtacgccgcggtgcccttc
gacagcttcaccctgcagaaggtgtaccagctggagacgggcctgacccgacaccccgag
gagaagccggtgcggaaggacaagcgggacgagctggtggaggccatccagtcggccgtg
gaggccctaaacagcccggccgagagcagccccgaccagcgtccttacacggcctcggac
ttcatcgaagggatctaccgcacagaaagggataaaggcactttgtacgagctcacgttc
agaggggaccacaagcaccagttcagacgcctcgtcttgttccgaccgtttggccccatc
atgaaagtgaagaaagaggagctgaacatgggcagcacgctggtcaatattatcgtgccc
ctggccaggagggtggacaagttccggcagttcatgcagaatttcagggagatgtgcatc
cagcaggatgggagagttcatctcactgttgtttactttggaaaagaagaaatgaatgag
gtcaaaggaatactcgaaaacacctccaggtaa
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