Sus scrofa (pig): 100517807
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Entry
100517807 CDS
T01009
Symbol
SYDE1
Name
(RefSeq) rho GTPase-activating protein SYDE1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100517807 (SYDE1)
Membrane trafficking [BR:
ssc04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100517807 (SYDE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
100517807
NCBI-ProteinID:
XP_003123474
Ensembl:
ENSSSCG00000013829
UniProt:
A0A8D0T4S9
F1SAN7
LinkDB
All DBs
Position
2:complement(62447030..62453944)
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AA seq
735 aa
AA seq
DB search
MAEPLLRKTFSRLRGREKLPRKKSDAKERGRPAQRQEPSPPEPEPQALEGSQPGAEGPPS
PEESRSPARGAYLQSLEPSSRRWVLGGAKPPEEAALGPGAPGSGEPAGEIWYNPIPEEDP
RPPTAEPPGLQPGSAEPESLTSPGTAPASPPTKASRTKSPGPARRLSMKMKKLPELRRRL
SLRSTRAGRERERAAPEGSVISRYHLDSSVGTPGRAAVAEGARGLRAGYLSDGDSPERPA
GPPSPTAFRPYEVGPSARSPPAALWGRLSLHLYGLGGLRPAPGATPRDLCCLLQVDGVAR
ARTGPLRGGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTVFRGC
QAQQLAVRLEPQGLLYAKLTLSEQHEAPSTAEPRVFGLPLPLLVEREQSPGQVPLIIQKC
VGQIERRGLRVVGLYRLCGSAAVKKELRDAFERDSTAVCLSEDLYPDINVITGILKDYLR
ELPTPLITQPLYQVVLEAMARGPPSRAPQSTEGTRGLLSCLPDVERATLTLLLDHLRLVS
SFHAHNRMTPQNLAVCFGPVLLPARQTPTRPRIRSSGPGLSNAVDFKRHIEVLHYLLQAW
PDPRRPPEAPELVPYLRPKPQPPLHLPLAGPDVVTRPRDRSGPESPPSNRYAGDWSVCGR
DFLPCGRDFLPGPDYDHVTGSDSEDEEEVGGETTGATDFEDDFEAPFNPHLNLKDFDALI
LDLERELSKQINVCL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgctgctcaggaaaaccttctcccgccttcggggccgggagaaacttccc
cggaaaaagtcggacgcgaaggagcgcggccgcccagcccagcgccaggagcctagccct
ccagagccagagccccaggccctggaaggatcccagcctggagcagaggggcctcccagc
cccgaagaatctcgtagcccggctcggggtgcctacctgcagagcctggagcccagcagc
cgccgatgggtgctgggtggggccaaaccaccggaggaggctgctttggggcctggggca
cctggcagtggagagcctgctggtgagatctggtacaaccccatccctgaagaggacccc
agacctccgacagctgagcccccagggctgcagccaggctcagctgagccagagagcctg
acttccccaggcacagcccctgccagtcccccaaccaaagcctcccgcaccaagtctcct
ggcccagccaggcgcctctcaatgaagatgaagaagctgcccgagttgcggcgccgcctg
agcctgcggagcacccgggctggccgagagcgtgagcgggccgccccagagggctcagtc
atcagccgttaccacctggatagcagcgtaggaaccccggggcgggcggcagtggctgag
ggcgcacggggcctgagggctggttacctcagtgatggcgactcacccgagcgcccagca
gggcccccatcacccactgccttccgcccctatgaggtgggcccatcagcccggtcgccc
ccggctgcactctggggccgcctcagcctgcacctgtacgggctgggggggctacggcca
gcacctggggccactccacgagacctctgctgcctgctgcaggtggatggggtggcgcgg
gcccgaacggggccgctgcgtggggggccagacttcctgcgtttggaccacaccttccac
cttgaactcgaggctgcccggctgctgcgggccctggtgttggcatgggacccaggcgtt
cggcggcacaggccctgcgcccagggcactgtgctgctgcccacagttttccgaggatgc
caggcccagcagctggccgtgcgcctggagccccaaggactgctatatgccaagctgacc
ctgtcagagcaacatgaagcaccaagcacagctgagccccgtgttttcgggttgccctta
ccactgctggtggagcgggagcagtccccaggccaggtgccccttatcatccagaagtgt
gtcgggcagatcgagcgccgagggctgagggtagtggggctataccgtctgtgcggctca
gcagctgtgaagaaagagcttcgagatgcctttgagcgggacagtacagctgtctgcctc
tctgaggacctgtaccctgatatcaatgtcatcactggtattctcaaggattatcttcgg
gaattgcctaccccactcatcacccagcccctctatcaggtggtgctggaggccatggcc
cgagggcccccaagcagggccccccagagcactgaaggcacacgtgggctcctcagctgc
ctgccagatgtggagagggccacgctgactcttcttctggaccacctgcgccttgtctcc
tccttccacgcccacaaccgcatgaccccgcagaacctggcagtgtgcttcggtcccgtg
ctgctgccggcgcgccagacacccaccaggccccgcatccgcagctctggcccaggcctc
tccaacgctgtggacttcaagcgccacatcgaggtgctgcactacctgcttcaggcctgg
ccagatccccgcaggcccccagaggctccggagttagtcccgtacctgcggcccaaacca
cagccgccgctgcacttgccgctagcgggcccggatgtggtgactcggcctcgcgaccga
agcggccccgagagccccccgagcaatcgctacgccggtgactggagcgtttgcgggagg
gacttcctgccctgtgggcgggacttcctgcccgggccagactacgaccacgtgacgggc
agcgacagcgaagatgaggaagaagtgggtggtgagacgacaggcgccaccgacttcgaa
gacgatttcgaggcgcccttcaacccgcacctgaacctcaaagactttgatgccctcatc
ctggacctggagagagagctctccaagcagatcaacgtgtgcctctga
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