Sus scrofa (pig): 100517817
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Entry
100517817 CDS
T01009
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100517817 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100517817 (GSPT1)
03012 Translation factors [BR:
ssc03012
]
100517817 (GSPT1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100517817 (GSPT1)
Translation factors [BR:
ssc03012
]
Eukaryotic type
Release factors
100517817 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100517817
NCBI-ProteinID:
XP_020942248
Ensembl:
ENSSSCG00000021118
UniProt:
I3LNK5
A0A4X1VPT1
LinkDB
All DBs
Position
3:31237155..31273832
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AA seq
640 aa
AA seq
DB search
MDPGSGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLAAAAAEAQRE
HLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPSAPPAGAAANNHGAGSGAGGPSA
PVEPSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAETGVGPLGD
GRPTEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTG
MVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDA
PGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLI
NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWY
IGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKH
NVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVI
IEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRT
AGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggtggcggcggcggtggcggaggaggtgggagcagcagcggcagc
agcagcagcgactcggcaccggattgctgggaccaggcggacatggaagcccccggaccg
ggaccgtgcggcggcgccggcggccctttggcagcggcggcggccgaggcccagcgtgag
cacctcagcgcggccttcagccggcaactcaacgtcaacgccaagcccttcgtgcccaac
gtccacgccgcggagttcgtgccgtccttcctgcggggcccggcccagccgtcagcaccc
ccagctggcgccgccgccaacaaccacggagccggcagcggcgcgggaggcccttcggca
cctgtggaaccttctcaagaggagcagtcattgttgtgtgaaggttcaaattcagctgtt
agcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtccccagaagaa
tcatgggagcacaaagaagaaataagtgaagcagagacaggggttggtcccttgggagat
ggaaggcccacagaggaaagtgcccaggaaatgatggaggaggaagaagaaataccaaaa
cccaagtctgtggttgcaccgccaggtgctcctaagaaagaacatgtaaatgtcgtgttc
attgggcacgtagatgctggcaagtcaaccataggaggacaaataatgtatttgactgga
atggttgacaaaaggacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaa
acttggtacctgtcttgggccctagacacaaatcaggaagaacgagacaagggtaaaaca
gtagaagtgggtcgtgcctattttgaaacagaaaagaagcattttacaattcttgatgcc
cctggccacaagagttttgtcccaaatatgattggtggtgcttctcaagctgatttggct
gtactggtaatctctgccaggaaaggagagtttgaaactggatttgaaaaaggaggacaa
acaagagaacatgcaatgttggcaaaaacagcaggcgtaaaacacttaattgtgcttatt
aataaaatggatgatccaacagtaaattggagcaatgagagatatgaagaatgtaaagag
aaactagtgccatttttgaaaaaagttggcttcaatcccaaaaaggacattcacttcatg
ccctgctcaggactgactggagcaaatcttaaagagcaatcagatttctgtccttggtac
attggattaccatttattccatatctggataatttgccaaacttcaatagatcagttgat
ggaccaatcaggctgccaattgtggacaagtacaaggatatgggcactgtggtcctggga
aagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaagcac
aatgtggaagttcttggaatcctttccgatgatgtagaaactgattctgtagccccaggt
gaaaacctcaaaatcagactgaaaggaattgaagaggaggagattcttccagggttcata
ctttgtgatcctaataatctttgtcattctggtcgcacatttgatgcccagatagtgatt
atagagcacaagtccatcatctgcccaggctataacgcggtgctgcatatccatacctgt
attgaagaagtcgaaataacagccttaatctgcttggtagacaaaaaatcaggagaaaaa
agtaagactcgaccccgttttgtgaaacaagatcaagtatgcattgctcgcttaaggaca
gcaggaaccatctgccttgagacctttaaagacttccctcagatgggccgttttacctta
agagatgagggtaagaccattgcaattgggaaagttctgaaactggttccagagaaagac
taa
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