Sus scrofa (pig): 100517932
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Entry
100517932 CDS
T01009
Symbol
APC
Name
(RefSeq) adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04310
Wnt signaling pathway
ssc04390
Hippo signaling pathway
ssc04550
Signaling pathways regulating pluripotency of stem cells
ssc04810
Regulation of actin cytoskeleton
ssc04934
Cushing syndrome
ssc05010
Alzheimer disease
ssc05022
Pathways of neurodegeneration - multiple diseases
ssc05165
Human papillomavirus infection
ssc05200
Pathways in cancer
ssc05206
MicroRNAs in cancer
ssc05210
Colorectal cancer
ssc05213
Endometrial cancer
ssc05217
Basal cell carcinoma
ssc05224
Breast cancer
ssc05225
Hepatocellular carcinoma
ssc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100517932 (APC)
04390 Hippo signaling pathway
100517932 (APC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100517932 (APC)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100517932 (APC)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100517932 (APC)
05206 MicroRNAs in cancer
100517932 (APC)
09162 Cancer: specific types
05210 Colorectal cancer
100517932 (APC)
05225 Hepatocellular carcinoma
100517932 (APC)
05226 Gastric cancer
100517932 (APC)
05217 Basal cell carcinoma
100517932 (APC)
05213 Endometrial cancer
100517932 (APC)
05224 Breast cancer
100517932 (APC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100517932 (APC)
09164 Neurodegenerative disease
05010 Alzheimer disease
100517932 (APC)
05022 Pathways of neurodegeneration - multiple diseases
100517932 (APC)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100517932 (APC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100517932 (APC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100517932 (APC)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100517932 (APC)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100517932 (APC)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100517932 (APC)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
100517932 (APC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_u14
APC_rep
APC_u15
APC_u9
APC_N_CC
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
ARM_ARMC5
ZER1-like_2nd
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
100517932
NCBI-ProteinID:
NP_001193359
Ensembl:
ENSSSCG00000014207
UniProt:
A0A8D0KFK7
F2X0U8
LinkDB
All DBs
Position
2:complement(116913354..116985303)
Genome browser
AA seq
2847 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEDEAM
ASSGQIDLLERLKELNLDSSNFPGVKLRSKMSLRSYGSREGSVSSRSGECSPVPMGSFPR
RGFVNGSRENTSYLEELEKERSLLLADLDKEEKEKDWYYAQLQNLTKRIDSLPLTENFSL
QTDMTRRQLEYEARQIRVAMEEQLGTCQDMEKRAQRRITRIQQIEKDILRIRQLLQSQAT
EAERSSQSKHEAGSYEAERQNEGQGVAEISMATSGNGQGSSTRVDHETASVLSSSSTHSA
PRRLTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCISMRQSGCLPLLIQLL
HGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETC
WEWQEAHEQGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQ
VDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDL
QQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCT
ENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEEHRQILRENN
CLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAM
GSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLS
PKASHRSKQRHKQNLYGDYAFDANRHDDNRSDNFNTGNMTVLSPYLNTTVLPSSSSSRGS
LDSSRSEKDRSLERERGISIGNYHPATENPGTSSKRGLQISTTAAQIAKVMEEVSAIHPS
QEDRNSGSTTELHCGTDERNALRRSSTAHSHANTYNFTKSENSNRTCPMPYAKVEYKRSS
NDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIHSANHMDDNDGE
LDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHIIEDEIKQNEQRQSRSQSTTYPVYPE
STDDKHLKFQPHFGQQECVSPYRSRAANGSEANRVGSNHGINQNVNQSLCQEDDYEDDKP
TNYSERYSEEEQHEEEERPTNYSIKYNEEKHHVDQPIDYSLKYATDIPSSQKPAFSFSKN
SSGQSTKTERISPSGENTSTPSSNAKRQSQLHPSSAQSRSGQTPKATSSSCKVPSINQET
IQTYCVEDTPICFSRCSSLSSLSSAEDEIGCDQQTQETDSANTLQIAEIKENSGTRSTEE
SVSEVPTVPQHIRTKSSRLQASGLSSESTRHKAVEFSSGAKSPSKSGAQTPKSPPEHYVQ
ETPLMFSRCTSVSSLDSFESRSIASSVQSEPCSGMVSGIISPSDLPDSPGQTMPPSRSKT
PPPPPPQTSQTKQEVPKSKAPSAEKRESGPKQAAVNAAVQRVQVLPDADTLLHFATESTP
DGFSCSSSLSALSLDEPFIQKDVELRIMPPVQENDNGNETENEQPEKSNENQEKEAEKPT
DSEKDLLDDSDDDDIEILEECIISAMPTKSSRKAKKPAQTASKLPPPVARKPSQLPVYKL
LPSQNRLQAQKHVSFTPGDDVPRVYCVEGTPINFSTATSLSDLTIESPPNELAAGEGARA
GAQSGEFEKRDTIPTEGRSTDEAQRGKSTSVAIPELDDNKTEEGDILAECINSAMPKGKS
HKPFRVKKIMDQVQQASMSSSGANKNQLDGKKKKPTSPVKPIPQNAEYRTRVRKNTDTKN
NLNAERAFSDNKDSKKQSLKNNSKDFNDKLPNNEDRVRGSFTFDSPHHYTPIEGTPYCFS
RNDSLSSLDFDDDDVDLSREKAELRKGKENKESEAKVSNHTELASNQQSAKTTQAVTKHP
INRGPSKPMLQKQSTFPQSSKDIPDRGAATDEKLQNFAIENTPVCFSRNSSLSSLSDIDQ
ENNNNKESEPIKETEPPHSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSED
DLLQECISSAMPKKKKPSRLKGDNEKHSPRNMSGILAEDLTLDLKDIQRPDSEHGLSPDS
ENFDWKAIQEGANSIVSSLHQAAAAACLSRQASSDSDSILSLKSGISLGSPFHLTPDQEE
KPFTSNKGPRILKPGEKSTLETKKMESENKGIKGGKKVYKSLITGKVRSNSEISSQMKQP
LQTNMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSESQAATTSPRGAKP
SVKSELSPVTRQTSQTAGSNKGPSRSGSRDSTPSRPAQQPLSRPMQSPGRNSISPGRNGI
SPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQTNLTKQTGLSKNGSSIPRSES
ASKGLNQMSCSNGSNKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKL
EESASFESLSPSSRPDSPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIE
YNDGRPIKRHDIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSA
SSESSEKAKSEDEKHVNSISGTKQTKESQVSTKGTWRKIKESEISPTNTTSQTTSSGAAN
GAESKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDTISEKGNPNAKD
SKDNQGKHNVSNGGAPTRTMGLENRLNSFIQVDAPDQKGTETKPGQSNSVPASETNESSI
AERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSSADSTSARPSQIPTPVNNNTKKR
DSKTDNTDSSGTQSPKRHSGSYLVTSV
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcttcatatgatcagttgttaaagcaagttgaggcactgaagatggagaac
tcaaatcttcgacaagagctagaagataattccaatcatcttacaaaactggaaactgag
gcatctaatatgaaggaagtacttaaacagctacaaggaagtattgaagatgaagctatg
gcttcttctggacagattgatttattagagcgcctcaaagaacttaacttagatagcagt
aatttccctggagtgaaactacggtcaaaaatgtccctccgttcttacggaagccgagaa
ggatctgtatctagtcgttcaggagagtgcagtcctgttccaatgggttcatttccaaga
agagggtttgtaaatggaagcagagaaaataccagttatttagaagaacttgaaaaagag
aggtcattacttcttgctgaccttgacaaagaagaaaaggaaaaagactggtattatgct
caacttcaaaatctcactaaaagaattgatagtcttcctttaactgaaaatttttcctta
cagacagatatgaccagacggcaattggaatatgaagcaaggcaaatcagagttgcaatg
gaagaacagctaggtacctgccaggatatggaaaaacgagcacagcgaagaataaccaga
attcaacaaatagagaaggacatacttcgtatacgacagcttttacagtcccaagcaaca
gaagcagagaggtcatctcagagcaagcatgaagctggctcatatgaagctgagcggcag
aatgaaggtcaaggagtggcagaaatcagtatggcaacttcgggtaacggtcagggttcg
agtacacgagtagatcacgaaacagccagtgttttgagttctagtagcacacactctgct
cctcgaaggctgacaagtcatctgggaaccaaggtggaaatggtgtattcattgttgtca
atgcttggtactcatgataaggatgatatgtcgcgaactttgctagctatgtctagctcc
caagacagctgtatatccatgcgacagtctggatgtcttcctctcctcatccagctttta
catggcaatgacaaagactctgtgttgttgggaaattcccggggcagtaaagaggctcgg
gccagggccagtgcagcactccacaacatcattcactcacagcctgatgacaagagaggc
aggcgtgaaatccgagtccttcatcttttggaacagatacgagcttactgtgaaacctgt
tgggagtggcaggaagcccatgaacaaggcatggaccaggacaaaaatccaatgccagct
cctgttgaacatcagatctgtcctgctgtgtgtgttttaatgaaactttcattcgatgaa
gagcacagacatgcaatgaatgaactagggggactacaggccattgcagaattattgcaa
gtggactgtgaaatgtatgggcttactaatgaccactacagtattactttaagacgatat
gcaggaatggctttgacaaatttgactttcggagatgtagccaacaaggctacactatgc
tcgatgaaaggctgcatgagagcacttgtggcccaactaaaatctgaaagtgaggactta
cagcaggtcattgcaagtgttttgaggaatttgtcttggagagcagatgtaaatagtaaa
aagacattgcgtgaagttggcagtgtgaaagcattgatggaatgtgctttggaagtgaaa
aaggaatcaaccctcaaaagcgtgttgagtgccttatggaatttgtcagcacattgcact
gagaataaggctgatatatgtgccgtagatggtgcgcttgcgtttttggttggcactctc
acttaccggagccagacaaatactttagccattattgaaagtggaggtgggatattacgg
aatgtgtccagcttgatagctacaaatgaagagcacaggcaaatcctaagagagaacaat
tgcttacaaaccttattacaacacttgaaatctcacagtttgacaatagtcagtaatgca
tgtggaaccttgtggaatctctcagccagaaatcctaaagaccaggaagcattatgggac
atgggggcagtcagcatgctcaagaacctcattcattcaaagcacaaaatgattgctatg
gggagcgccgcagctttaaggaatctgatggcaaatagacctgcaaagtataaagatgcc
aatatcatgtctcctggttcaagcttgccttctcttcatgtcaggaaacaaaaagcccta
gaagcagaattagacgcccagcatttatcagaaacttttgacaatattgacaatttaagt
cccaaggcatctcatcgtagtaagcaaagacacaagcaaaatctctacggtgactatgct
tttgatgccaatcgacatgacgataataggtcagacaattttaatactggaaacatgact
gtcctgtcaccatatttaaatactacagtgttgcccagctcctcttcatcaaggggaagt
ttagatagttctcgttctgagaaagacagaagtttggagagagaacgaggtattagcata
ggcaactaccatccagcaacagaaaatccaggaacctcttcaaagcgaggtttgcagatt
tccaccactgcagcccagatcgccaaagtcatggaagaagtatcagccattcatccctcc
caggaagacagaaattctgggtcaaccacggagttgcactgtgggacagatgagaggaat
gcactgagaagaagctctactgcccactcacacgcaaacacgtacaacttcaccaagtca
gaaaactcaaacaggacatgtccaatgccatatgccaaagtagaatataagagatcttca
aatgatagtttaaatagtgtcagtagtagtgatggttatggtaaaagaggccagatgaaa
ccttcaattgaatcctattctgaagacgatgaaagtaaattttgcagctatggtcagtat
ccagctgacctagcccataaaatacatagtgcaaatcatatggatgataatgatggagaa
ctagatacaccaataaattacagtcttaaatattcagatgaacagctgaactccggaagg
caaagtccttcacagaatgaaaggtgggcaagacccaaacatataatagaagatgaaata
aaacaaaatgagcaaagacaatcaaggagtcaaagcacaacttatcctgtgtatcctgag
agcactgatgataaacacctcaagtttcagccgcattttggacagcaagaatgtgtttcc
ccatataggtcaagagcagccaatggttcagaagcaaatcgagtaggttctaatcatgga
attaatcaaaatgtaaaccagtctttgtgtcaggaagatgactatgaagatgataagcca
accaactacagtgaacgttactctgaggaggagcaacatgaggaagaagagagaccaacc
aattatagcataaaatacaatgaagaaaaacatcatgtggatcagcctattgattatagt
ttaaaatatgccacagacatcccttcttcacagaaaccagcattttcattctcaaagaat
tcatctggacaaagtactaaaactgaacgcatctctccaagcggtgagaacacatccaca
ccttcctctaatgccaagaggcagagccagctccatccaagttcagcacaaagcagaagt
ggtcagaccccaaaagccacctcctcctcttgcaaagttccctctatcaaccaagaaacc
atacagacttactgtgtagaagataccccaatatgtttttcaaggtgtagttcattatcg
tctttgtcatcagccgaagatgaaatagggtgtgatcagcaaacgcaggaaacagattct
gctaatactctacaaatagccgaaatcaaagaaaacagtggaaccagatcaactgaagag
tctgtgagcgaagttccaacagtgccacagcacattagaaccaaatccagcagactccag
gcttctggcttatcttcagaatcaaccaggcacaaagctgttgaattttcttcaggggcc
aaatctccatcaaagagtggtgctcagacacctaaaagtccaccagagcactacgttcag
gagactccactcatgttcagcagatgtacctctgtcagctcacttgacagttttgagagt
cgttccattgccagctccgttcagagtgagccctgcagtggaatggtgagtggcattata
agccccagtgaccttccagatagcccaggacaaaccatgccaccaagcagaagtaaaacc
cctccccctccccctcctcaaacaagtcaaaccaagcaggaagtacctaaaagtaaagca
cctagtgctgaaaagagagaaagtggacctaagcaagctgctgtgaatgctgcagtacaa
agggtccaggttcttccagatgctgatactttgttacattttgctacagaaagtactccg
gatggattttcttgttcatctagcctgagtgccctgagcctcgatgagccatttattcag
aaagatgtggaattaagaataatgcctccagttcaggaaaatgacaatggcaatgaaaca
gaaaatgagcagcctgaaaaatcaaatgaaaaccaggaaaaagaggcagaaaagcccact
gattctgaaaaagacctattagatgattcagatgatgatgatattgaaattctagaagag
tgtattatttctgccatgccaacaaaatcttcacgcaaagcaaaaaagccagcccagact
gcttcaaaattacctccacctgtggcaagaaaaccaagtcaactgcctgtgtacaaactt
ctgccctcacaaaacaggttacaagcacaaaagcatgttagttttacaccaggagatgat
gtgccacgtgtgtattgtgtagaagggacacctataaacttttccacagctacatctcta
agtgatctaacaatagaatcccccccaaatgagttggctgctggagaaggggccagagca
ggggcacagtcaggtgaatttgaaaaacgagacaccattcctacagaaggcagaagtaca
gatgaggctcaaagagggaaatccacatctgtagctatacctgaactggatgacaataaa
acagaagaaggtgatatccttgcagaatgcattaattctgctatgcccaaaggaaaaagt
cacaagcctttccgtgtgaaaaagataatggaccaggtccagcaagcatctatgtcctca
tccggagctaacaaaaatcaattagatggtaagaaaaagaaacctacttcaccagtaaaa
cccataccacaaaatgctgaatataggacgcgtgtaagaaaaaatacagacacgaaaaat
aatttaaatgctgaaagagctttctcagacaataaagattcaaagaaacagagcttgaaa
aataattccaaggacttcaacgataagctgccaaataatgaagatagagtcagaggaagc
tttacttttgattcacctcatcactacacacctattgaaggcactccgtactgtttttca
cgaaatgattctttgagttctctagattttgatgatgatgatgttgacctttcgagggaa
aaggctgaattaagaaaggggaaggaaaacaaggaatcagaagctaaggttagcaaccac
acagaactagcctcgaaccaacaatcagctaagacgacacaggctgttacaaaacatcca
ataaatcgaggtccgtctaaacctatgctgcagaagcagtccacttttccccagtcctcc
aaagatataccagacagaggggcagcaactgatgagaaattacaaaattttgctattgaa
aatactccagtttgcttttctcgaaattcctctctaagttctcttagtgacattgatcag
gaaaacaacaacaacaaggaaagtgaacctatcaaagagacagagcctcctcattcccag
ggagaaccaagtaaacctcaggcatcaggttatgctcctaaatcatttcatgttgaagat
acccctgtttgtttctcaagaaacagttctctcagttctctcagtatcgattctgaagat
gacctattgcaggaatgtataagttctgccatgccaaaaaagaaaaagccttcaagactc
aagggtgataatgaaaagcatagtcccagaaacatgagtggcatattagcagaagatttg
acgcttgatttgaaagatatacagagaccagattcagaacatggtttatcccccgattca
gaaaattttgattggaaagctattcaggaaggtgcaaattccatagtaagtagtttacat
caagctgctgctgccgcatgtttatctagacaggcttcgtctgattcagattccatcctg
tccctgaaatcaggaatctccctggggtcaccatttcatcttacacctgatcaagaggaa
aaaccctttacaagtaataaaggcccacgaattctaaaacctggagagaaaagtacactg
gaaactaaaaagatggaatctgaaaataagggaataaagggagggaaaaaggtttataaa
agtttgattactggaaaagttcgatctaattcagaaatttcaagccaaatgaaacagcct
cttcaaacaaacatgccttcaatctctcgaggtaggacaatgattcacattccaggagtt
cggaatagctcttcaagtaccagtccagtttctaaaaaaggtccaccgctgaagactcca
gcctccaaaagccctagtgaaagtcaggcggctaccacttctcccagaggagcaaagccc
tcagtgaaatcagaattaagccctgttaccaggcagacatcgcagacagctgggtccaat
aaagggccttctagatcaggatctagagattccactccttcaagacctgcccagcaacca
ctcagtaggcctatgcagtctccagggagaaactcgatttctcctggtagaaatggaata
agtcctcctaacaaattatctcaactaccaaggacgtcatcccctagtactgcttcaact
aagtcctcaggttcggggaaaatgtcttacacatctccaggcagacagatgagccagaca
aaccttaccaaacaaacaggtttatccaagaatggcagcagtatcccaagaagtgagtct
gcctccaaagggctaaatcaaatgagttgtagcaatggatccaataaaaaggtagaactt
tctagaatgtcctcaactaaatcaagtggaagtgaatctgatagatcagagagacctgtg
ttagtacgccagtcaactttcatcaaagaagctccaagtccaaccctgaggagaaaactg
gaggaatctgcttcgtttgaatctctttctccatcttctcgaccagattctcccactcgg
tcccaggcacagactccagttttaagtccttctcttcctgatatgtctctgtccacacat
tcgtccgttcaggctggtgggtggcgaaaactcccacctaatctcagtcccaccatcgag
tataatgacggaagaccaataaagcgccatgatatagcacgctcccactctgaaagtcct
tccagacttcccatcaataggtcaggaacctggaaacgtgagcacagcaaacactcatca
tcccttcctcgagtaagcacttggagaagaactggaagttcatcctcaattctttcggct
tcatcagagtccagtgaaaaggcaaaaagtgaggatgaaaaacatgtgaactctatctcg
ggaaccaaacaaactaaagaaagccaagtatccacaaaaggaacatggaggaaaataaaa
gaaagtgaaatttctcccacaaatactacttctcagaccacttcctcaggtgctgcaaac
ggtgctgaatccaagactctaatttatcaaatggcacctgctgtttctaaaacagaggat
gtttgggtgagaatcgaggactgtcccattaacaaccccagatctggaagatctccaaca
ggaaataccccccctgtgattgacaccatttcagaaaaaggaaacccaaacgctaaagat
tcaaaagataatcagggaaaacacaatgtgagtaatggtggtgctcccacacgcaccatg
ggtttggaaaaccgcctgaactcctttattcaggtcgatgccccagaccaaaaaggaact
gagacaaaaccgggacaaagcaactctgtccctgcatcagagactaacgaaagttctata
gctgagcgtaccccatttagttctagcagctcaagcaagcacagttcacccagtgggacc
gttgctgccagagtgactccttttaattacaacccaagccctaggaaaagcagcgcagat
agcacttcagcccgaccatctcagatcccgacgccggtgaataacaacacgaagaaacga
gattcaaaaactgacaacacagactccagtggaactcaaagtcctaaacgccattctggg
tcttaccttgtgacgtctgtttaa
DBGET
integrated database retrieval system
