Sus scrofa (pig): 100517977
Help
Entry
100517977 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 30B-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100517977
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100517977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
TPR_CcmH_CycH
TPR_14
ANAPC3
TPR_16
ARM_TT21_C
TPR_6
Motif
Other DBs
NCBI-GeneID:
100517977
NCBI-ProteinID:
XP_003133553
LinkDB
All DBs
Position
15:complement(83353505..83359532)
Genome browser
AA seq
665 aa
AA seq
DB search
MAGLGGAQIPDGEFTTVVYRLIRDARYAEAVQLLGGELQGSPKSRAGLSLLGYCYYRLQE
FALAAECYEQLGQLHPELEQYRLYQAQALYKACLYPEATRVAFLLLDNPAYHSRVLRLLA
AIKYSEGDLPGARSLVEQLLSGEGREDSGGENELDDQVNLGCLLYKEGHYEAACSKFFXA
LQASGYRPDLSYNLALAYYSSRHYASALKHIANIIEHGIRQHPELGVGMTTEGIDVRSVG
NTLVLHQTALVEAFNLKAAIEFQLRNYEAAQEALTDMPPRAEEELDPVTLHNQALMNMDT
RPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEYFALAADXLAENAHLTYKFLTPYLYD
FLDALITCQTAPEEAFIKLDGLAGVLTEQLRRLTKQVQEARHNRDDEAVKKAVNEYDDAF
EKYIPVLMAQAKIYWNLENYPMVEKILRKSVEFCNDHDVWKLNVAHVLFMQENKYKEAIG
FYEPIVKKHYDNILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDPDKKI
YHLCIVNLVIGTLYCAKGNYDFGISRXIKSLEPYNKKLGTDTWYYAKRCFLSLLENMSKH
TLMLRDSVIQECVQFLEHCELYGRNIPAIIEQPLEEERMHIGKNTVTYESRQLKALIYEI
IGWNM
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgggcggtgcgcagatccccgacggggaattcaccactgtcgtgtaccgc
ctcatccgggatgcccgctacgccgaggccgtgcagctgctgggcggagagctccagggg
agccccaagagccgcgccggcttgtcgctgctgggctactgctactaccgcctacaggag
ttcgcgctggcggccgagtgctatgagcagctgggccagctgcacccagagctggagcag
taccgcctgtaccaggcccaggccctgtacaaggcctgcctttacccggaggccacccgc
gtggccttcctcctgctggacaaccccgcctaccacagccgggtcctccgtctcctagcg
gcgatcaagtacagcgagggcgatctgccaggggccaggagtctggtggagcagctcctg
agtggggaagggagagaagacagtgggggcgagaacgagctggatgaccaggtcaacctg
gggtgtttactctacaaggagggacactacgaggctgcatgttccaagttctttngcgcc
ttacaggcttcaggctaccggcctgacctttcctacaatctggctttggcctattacagc
agcaggcactatgcctcagcactgaagcacatcgccaacattattgagcatggcatccgt
cagcacccagagctgggtgtgggcatgacgaccgagggcattgatgttcgaagtgtgggc
aacaccttagttcttcaccagactgctctggtggaagccttcaacctcaaggccgccata
gaattccagctgagaaactatgaggcggcccaggaagccctcactgacatgccacctagg
gcagaggaagagttagaccctgtgaccttgcacaaccaggcgctcatgaacatggatacc
aggcctacagaagggtttgaaaagctacaatttttgctccagcagaatccttttcctcca
gagacctttggcaacctgttgctgctctactgtaaatatgagtattttgctctggccgca
gatngtctggcagagaatgcccatttgacctacaagttcctcacaccctatctctatgac
ttcttggatgccttgatcacttgccagacagctcctgaagaggcttttatcaagcttgat
gggctggcaggggtgctgactgaacagctccggagactcaccaaacaagtgcaggaagca
agacacaacagagatgatgaagctgtcaaaaaggcagtgaatgaatatgatgacgctttt
gagaagtatattcctgtgttaatggcccaggccaaaatctactggaaccttgaaaattac
ccaatggtggaaaagatcttacgcaaatctgtagaattctgtaatgaccatgacgtgtgg
aagctgaatgtggctcatgttctgttcatgcaggaaaacaaatacaaagaagccataggt
ttttatgagcccatcgtcaagaagcactatgacaacatcctgaatgtcagtgctattgta
ttggctaacctgtgtgtgtcttatatcatgacaagtcaaaatgaagaagctgaggagctg
atgaggaagattgaaaaagaggaggagcagctctcctatgatgaccccgataagaaaatc
taccatctctgcattgtgaatttggtgatcgggacgctttattgtgccaaaggaaattat
gactttggtatttctcggnttatcaaaagcttggagccttataataaaaaactgggaact
gatacctggtattatgccaaaagatgcttcctctcattattagagaacatgtcaaaacac
acgctcatgcttcgtgacagtgtcattcaagaatgtgtccagtttttagaacactgtgaa
ctttatggcaggaacatacctgccattattgaacaacccctggaagaagaaagaatgcac
attggaaagaatacggtcacatatgaatccagacaattaaaagccttgatttatgagatt
ataggatggaatatgtag
DBGET
integrated database retrieval system
