Sus scrofa (pig): 100517999
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Entry
100517999 CDS
T01009
Symbol
MAP1S
Name
(RefSeq) microtubule-associated protein 1S
KO
K10429
microtubule-associated protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100517999 (MAP1S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100517999 (MAP1S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100517999 (MAP1S)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100517999 (MAP1S)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
100517999 (MAP1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
100517999
NCBI-ProteinID:
NP_001230114
Ensembl:
ENSSSCG00000013884
LinkDB
All DBs
Position
2:complement(60003116..60043133)
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAAVARPGASEAPSSLLLVVGGECGSPGLLAYVLEELERGIRSWDIDSGICSLNEQLKV
FVSRHSATFSNIVKGQRSLHHRGDTLETLVLLNPSDKSLCDELRNLLLDPASHKLLVLAG
PCLEETGELLLQTGGFSPRHFLQVLGDKEIRDLLASTPPPVDPPKLTITCPTFGDWAQLA
PEVSGLQGVLQLQLNPPVHLPASEGLRELLEYVAESLELPSPFELLEPPASVGFLRLARP
CCYIFPGGLGDAAFFAVNGFTVLVNGGSNPKSSFWKLVRHLDRVDAVLVTHAGADSLPGL
NSLLRRKLAERDEAAAGGGSGDDRLRRLISPNLGVVFLNARAAASRLVRGEDEAELALSL
LAQLGITPLPLHRGPLPAEPTVLFQKMGVGRLDMYVLHPPSAAADHTLASVCALLVWHPA
GPAEKVVRVLFPGCTPPARLLDGLVRLQHLGFLREPVVTPQDLAGPRRAESKESVGSRDS
LRREGRATVPSRPAQERPGVTRKEPPRAEAPRRAEKEARPPREVKKDPKLSAPRAREPRE
VRRTASAVVSSKKAGAQAAPKPRRAPNTPRPGVPPAENGPRSPPSFRCGEASPPTEACGS
PAPQLVATPSQESSLELGLSPVGEDGGSLEEKTLELLLATNTPQPCSPSPAGAHQGQTES
CGPLSLSPLRGGEAGPDASPTVTTPSLPAEVGSPHSTEVDESLSVSFEQVLPPPPATSSE
AGLSLPLCGPRVRRSASPHDVDLCLVSPCEFEHRKAVPMAPAPVSPGSSNDSSARSQERA
GAPGAEETPPTSVSESLPTLSDSDPLPAGPGTADSDEDTEGFGVPRRDPLPDPLKIPPPL
PAPPSICMVDPEMLPPEQARLREGLSRTRKPLTRPSPGTAAPKATAGTAAKTKGLASGDR
ASRPLSARSEPSDKGSRAPLSRKPSVPKMTTRGSSGSAGSRPGGSAAPPGSPVYLDLAYL
PSGGSARLVDEEFFRRVRALCYVISGQDQHKEEGMRAVLDALLAGKQQWDRDLQVTLIPT
FDSVAMHEWYEETHARHQALGITVLGSNSTVSMQDEAFPACKVEF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggcgaggcccggggcgtcggaggcacccagctcgctgctgctggtg
gtgggcggcgagtgcgggtccccggggctgctagcctatgtgctggaggagcttgaacga
ggcatccggtcttgggacattgactctggcatctgcagcctcaatgagcagctcaaggtc
ttcgtgtcccggcactcggccaccttctccaacattgtgaaaggccagcggagcctgcac
caccgtggagataccctggagacgctggtccttctgaatccatcagacaaatccctatgt
gacgagctccggaatcttcttttggaccctgcttctcacaagctgctggtgctggctggg
ccatgcctggaggagacaggggaactgctgctacagacggggggcttctcacctcgccac
ttcctccaggtcctgggggacaaagagatccgggatctcctggcctccacacccccacct
gtggacccgcccaagctcaccatcacctgtccgaccttcggtgactgggcccagctggca
cctgaagtgtctggcctccagggcgtgctccagctgcagttaaaccctcccgtgcacctg
ccggcttccgaaggcctgcgtgagctcctggagtatgtggctgagtcgctggagctgccg
tccccctttgagctgctcgagcctccggcctccgtgggcttcctccggctcgcccggccc
tgctgctacatcttccctggtggcctcggggatgctgccttcttcgctgtcaacggcttc
accgtgctggtcaacgggggctctaaccccaagtcaagcttctggaagctggtgcggcac
ctcgaccgggtggatgccgtgctggtgacccacgcgggcgccgacagcctccctggcctc
aacagtctgctgcggcgcaagctggcagagcgcgatgaggcagctgctggcgggggctcc
ggggacgaccggctgcgcaggctgatctcccccaacctgggggttgtgtttctcaatgcc
cgggcggccgcctcgcggctggtgcgtggcgaggacgaggcagagctggccctgagtctc
ctggcccagctggggatcacacccctgcccctgcaccgcgggccgctgccggccgagccc
acagtgctcttccagaagatgggtgtgggccggctggacatgtacgtgttgcacccaccc
tcggctgctgctgaccacacactggcctccgtgtgcgccctgctggtgtggcacccagca
ggccccgctgagaaggtggtacgagtgctgttccctggctgcacgcctcctgctcgcctc
ctggatggcctggtccgcctgcagcacttggggttcttgcgggagcctgtggtgaccccc
caggacctggcagggcctcggcgagctgagagcaaggaaagcgtcggctcccgggacagc
ttgaggcgagagggccgggccacggtgccctccaggcctgcccaggagcgccccggggtg
acccgaaaggagcccccgcgggccgaggcccctcgcagggctgaaaaagaagccaggccc
ccccgggaggtgaagaaggaccccaagctgagtgcccctcgggcaagggagccaagggag
gtacgccggacggcctccgctgtggtcagcagcaagaaggcgggtgcccaagctgctccc
aagccccgcagagcacccaacacaccacgccctggtgtcccaccggcagagaatgggccc
cgcagccctcccagcttccgatgtggagaggccagcccccccacagaagcctgtggctcc
ccagcccctcagctcgtggccacccccagccaggagagcagcctggagctggggctgagc
ccggttggggaggatggcggcagcttggaggagaagacactggagctgctgctggccacc
aacaccccccagccgtgctcgccctctcctgccggagcccaccagggccaaactgagagc
tgtgggccactgtcactgagcccactgcgtggtggagaggcagggccagatgcctccccc
acagtgaccacgccctcattacccgctgaggtgggctccccacactccacagaggtggac
gagtccctttccgtctcctttgagcaggtgctccctccaccgcctgccacctcgagcgaa
gccgggctgagcctcccactctgtggccctcgggtgcggcgctcagcctccccgcatgat
gtggacctgtgcctggtgtcaccatgtgagtttgagcaccgcaaggccgtgcccatggca
ccggcacccgtatctcctggcagctccaatgacagcagcgcccggtcccaagaacgggca
ggcgctccaggggccgaggagacgccacccacatccgtcagtgagtccctgcccaccctc
tctgactcggaccccctgcctgctggccccggaaccgcggactcagatgaggacacagag
ggctttggagtccctcgccgtgacccactacctgatcccctcaagatccccccaccacta
cccgccccacccagtatctgcatggtggaccctgagatgctgcccccggagcaggctcgg
ctgagagagggcctcagccgtacccggaagcccctcactcgccccagccccggcactgcc
gcccccaaagccactgcagggactgctgccaaaaccaaggggctggccagtggggaccgg
gccagtcggccactcagcgcccggagcgagcccagtgacaaaggaagtcgggcacccctg
tcaaggaagccctcggtccccaagatgaccactcgaggttcatctgggtcagctggtagt
cggccaggagggtcagcagccccacccggctcccctgtctacctcgacctggcctacctg
cccagcgggggcagtgcccgcctggtggacgaggagttcttccggcgggtgcgagcgctc
tgctacgtcatcagcggccaggaccagcacaaggaagagggcatgcgggccgtcttggat
gcgctcctggctggcaagcagcaatgggaccgggacctccaggtgacactgatccccacc
tttgattcggtggcgatgcacgagtggtacgaggagacgcacgcccggcaccaggcgctg
ggcatcacagtgttgggcagcaacagcaccgtgtccatgcaggacgaggctttcccggcc
tgcaaggtggagttctag
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integrated database retrieval system
