Sus scrofa (pig): 100518103
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Entry
100518103 CDS
T01009
Symbol
FGD1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100518103 (FGD1)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
RHG20_PH
CENP-B_dimeris
PH_2
FAM176
Motif
Other DBs
NCBI-GeneID:
100518103
NCBI-ProteinID:
XP_003135154
Ensembl:
ENSSSCG00000012335
Vega:
OTTSUSG00000004585
UniProt:
A0A8D0SVY8
F1RUG2
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All DBs
Position
X:complement(47191838..47231656)
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AA seq
960 aa
AA seq
DB search
MHGHRAPGGAGPSEAEHPAANSHGAATPAYADSDPGASDPGLPVPRSSGSALGSSLDPQF
AGPSDASLGVAPGPRVLPCGPSPQHHRALRFSYHLEGSQPRPGLHQGNRILVKSLSLDPG
QGLEPHPEGPQRLRSDPGPPTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMPPPPEPI
PPPPSRPLPADPRVAKGLAPRAEASPSSAAVSSLIEKFEREPVIVASDRPAPGPSPGPTE
PAMLLQPPPQPPVPQLPEGEASRCLFLLAPGPRDGEKVPNRDSGIDSISSPSNSEETCFV
SDDGPPSHSLCPGPPALASVPVALADPHRPGSQEVDSDLEEEDDEEEDEKDREIPVPPME
RQESVELTVQQKVFHIANELLQTEKAYVSRLHLLDQVFCARLLEEARNRSSFPADVVHGI
FSNICSIYCFHQQFLLPELEKRMEEWDRYPRIGDILQKLAPFLKMYGEYVKNFDRAVELV
NTWTERSTQFKVIIHEVQKEEACGNLTLQHHMLEPVQRIPRYELLLKDYLLKLPHGSPDS
KDAQKSLELIATAAEHSNAAIRKMERMHKLLKVYELLGGEEDIVSPTKELIKEGHILKLS
AKNGTTQDRYLILFNDRLLYCVPRLRLLGQKFSVRARIDVDGMELKESSNLNLPRTFLVS
GKQRSLELQARTEEEKKDWVQAINSTLLKHEQTLETFKLLNSTNREDEDTPPNSPNVDLG
KRAPTPIREKEVTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLVYDNNRSNRV
CTDCYVALHGVPGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLYYMEKGGKGWHKA
WFVVPENEPLVLYIYGAPQDVKAQRSLPLIGFEVGPPEAGERPDRRHVFKITQSHLSWYF
SPETEELQRRWMAVLGRAGRGDTFCPGPTLSEDREMEEAPVAASGATAEPSEAPQTRDKT
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcatggccaccgagccccggggggcgccgggccttccgaggccgaacacccagccgcg
aactcccacggcgccgctacaccggcctatgcagactcggaccctggagcctcggatccc
ggactgccagtgcccaggagctcaggctcggctctcggcagctctttggatccccagttt
gccggaccctcggacgccagcctgggcgttgctccaggcccccgggtcttgccctgcggc
cccagtccacaacaccaccgggccctgcgcttctcctaccacctggagggctcgcagccc
cggcctgggctgcaccagggaaaccggatcctggttaaaagtttgtcccttgaccctggc
cagggccttgagcctcatccagaaggtccccagcggcttcgctcagacccaggtcccccc
actgaaacccctagccagcgtccttcaccactgaagcgggcaccgggcccaaagccacag
gtccccccgaagcctagctacctgcagatgccccggatgccccctccacctgagcccatc
ccacccccaccgtcacgcccactgcctgcagacccccgagtggccaagggcctggccccc
agggcagaggccagccccagttctgcagcagtatcctcactgattgagaaatttgaaaga
gagcctgtgattgtcgcctcggacaggccagcccctgggcccagcccaggtcccaccgag
ccagccatgttgctacagccacccccacagccaccagtgccccagctccccgagggcgag
gcctcccgctgcctgttcctgctggctcctgggccccgggacggcgagaaggtgcccaat
cgggacagcggcattgatagcatcagctcaccatccaacagcgaggagacctgcttcgtc
agtgatgatgggccccccagccacagcctctgccctgggccccctgccctggccagtgtc
cctgttgctttggccgacccccaccggcccggctcccaggaggttgatagcgacctggag
gaagaggatgatgaagaggaggatgaaaaggacagagaaatcccagtacccccaatggag
agacaggagtctgtggagttgactgtgcagcagaaggtgttccacattgccaatgaactc
ctgcaaaccgagaaggcctacgtttccaggctccacctcctggatcaggtgttctgcgcc
cggctactggaagaagctcggaaccgcagttccttcccagccgatgttgtccatggcatc
ttctctaacatctgctccatctattgcttccaccagcagttcctgctacctgagctagag
aagcgcatggaggaatgggaccgctacccacgcattggagacatcctgcagaagctggca
cccttcctcaagatgtatggcgagtatgtaaagaactttgaccgggccgtggagctggtc
aacacctggacagagcgctccactcagtttaaagtgatcatccatgaggtgcagaaggag
gaagcctgcggcaacctgacattgcagcaccacatgctggagcccgtgcagcgcatcccc
cgttatgagctgcttctcaaggactatctgttaaagctgccccatggctccccagacagc
aaggatgcccaaaagtctctggagcttatagccacagcagcagagcactctaacgctgcc
atccgcaaaatggagcgaatgcacaagctgctgaaggtatatgagctgctaggcggggag
gaagacattgtcagccccaccaaagagctcataaaagaaggccacatccttaagctgtca
gcgaagaatgggaccactcaagaccgatacctcatactgttcaacgaccgcctcctttac
tgtgtgcccaggctgcggctacttggccagaagtttagcgtgcgggcacgcattgatgta
gatggcatggagctaaaggaaagctccaacctcaatctgcctcggaccttcctggtgtca
ggaaagcagcgctccctggagctccaggccaggactgaggaggagaagaaagactgggtc
caggccatcaactccaccctcctaaagcatgagcagacgctggagaccttcaaactgttg
aactcgaccaacagggaagatgaagacacaccccccaactctccgaacgtggatcttggg
aagcgggcacctacacccatccgggaaaaggaagtcaccatgtgcatgcgctgccaggag
cccttcaattccatcaccaaacgcaggcaccactgcaaggcctgtgggcatgtggtttgt
gggaagtgctccgagtttcgggcccgcctcgtctatgacaacaaccgttccaaccgtgtg
tgcactgactgctacgtggccttgcatggtgtgcccgggagcagcccagcctgcagccag
catacacctcagcgccggaggtccatcctggagaaacaggcctcagtggctgcggagaac
agcgtcatctgcagcttcctgtactacatggagaagggcgggaaaggctggcacaaggca
tggtttgtggtccctgagaacgaacccttggtgctgtacatctacggagcccctcaggat
gtgaaagcccagcgcagcctgcccctcattggctttgaggtggggcctcctgaggctggg
gaacggcctgacagaaggcatgtcttcaagatcacccagagccacctgagctggtacttc
agtcctgagacagaggagctgcagcgacgatggatggctgtgcttggccgggcaggccgt
ggggacacgttctgcccagggcctacattgtctgaggacagggagatggaagaggcaccg
gtggcagcttcaggagccactgctgaaccctctgaagccccccagacccgagacaagacc
tag
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integrated database retrieval system
