Sus scrofa (pig): 100518152
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Entry
100518152 CDS
T01009
Symbol
NECTIN3
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
ssc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100518152 (NECTIN3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100518152 (NECTIN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100518152 (NECTIN3)
04090 CD molecules [BR:
ssc04090
]
100518152 (NECTIN3)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
Nectin family
100518152 (NECTIN3)
CD molecules [BR:
ssc04090
]
Proteins
100518152 (NECTIN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
I-set
Ig_2
TM_ErbB1
Ig_6
C1-set
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
100518152
NCBI-ProteinID:
XP_020926053
Ensembl:
ENSSSCG00000011933
Vega:
OTTSUSG00000002420
UniProt:
A0A4X1U7U7
A0A287B3B5
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All DBs
Position
13:complement(148448581..148578920)
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AA seq
549 aa
AA seq
DB search
MARTPGPAPLCPGGGKAQLSSASPPGAGLLLPPPTPPPLLLLLFPLLLFSRLCGALAGPI
IVEPHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGR
VLFKNYSLNDATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDS
LIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIVSQYKLFPTRFAR
GRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPF
KSVWSRLDGQWPDGLLASDNTLHFVHPLTFNYSGVYVCKVTNSLGQRSDQKVIYISDPPT
TTTLQPTVQWHPSTADFEDLATEPKKLPFPLSTLATIKDDTIGTIIASVVGGALFVVLVS
VLAGIFCYRRRRTFRGDYFAKNYIPPSDMQKESQIDVLQQDELDSYPDSVKKENKNPVNN
LIRKDYLEEPEKTQWNNVENLSRFERPMDYYEDLKMGMKFVSDEHYDENEDDLVSHVDGS
VISRREWYV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggaccccggggccggctccgctgtgtcccggaggcggcaaagcacaactttcc
tccgcttctccccccggggccgggctcctgctgccgcccccgacgccaccgccgctgctg
ctgctgctcttcccgctgctgctcttctcccggctctgtggtgccttagctggaccaatt
attgtggagccacatgttacagcagtatggggaaagaatgtttcattgaaatgtttaatt
gaagtaaatgaaactataacacaaatttcatgggagaagatacatggcaaaagttcacag
actgttgcagttcatcatcctcaatatggattctctgttcaaggagaatatcagggaaga
gtcttatttaaaaactattctcttaatgatgcaacaattactctgcataacataggattc
tctgattctggaaaatacatatgcaaagctgttacattccctcttggaaatgctcagtcc
tctacaactgtaactgttttagttgaacccactgtgagcctgataaaagggccagattct
ttaattgatggaggaaatgaaacagtagcagccatttgtatcgcagccactggaaaacca
gttgcacacattgattgggaaggtgatcttggtgaaatggaatccactacaacttctttt
ccaaatgaaacagcaacaattgtcagccagtacaagctttttcctaccagatttgctaga
ggaaggcgaattacttgtgttgtaaaacatccagccttggaaaaggacatccgatattct
tttatattagatatacaatatgctcctgaggtttcagtaacaggctatgatggaaactgg
tttgtaggaagaaaaggtgttaatctcaagtgtaatgctgatgcaaatccaccacccttc
aagtctgtttggagcaggttggatggacagtggcctgatggtttattggcttcagacaat
actcttcattttgtccatccactgactttcaattattctggtgtttatgtctgtaaagtg
accaattcccttggtcaaagaagcgatcaaaaagtcatctatatttcagatcctcctact
actaccacccttcagcctacagttcagtggcatccctcaactgctgacttcgaggatcta
gcaacagaaccaaaaaaattgcccttcccattgtcaactttggcaacaattaaggatgac
acaattggcacaatcattgctagtgtagtgggtggggctctcttcgtagtacttgtaagt
gttctggctggaatattctgctataggagaagacggacgtttcgtggagactactttgcc
aagaactacattccaccatcagatatgcaaaaagaatcacaaatagatgttcttcaacaa
gatgagcttgattcttacccagacagtgtaaaaaaagaaaacaaaaatccagtgaacaat
ctaatacggaaagactatttagaggagcctgaaaaaacacagtggaacaatgtagaaaat
ctcagtaggtttgaaagaccaatggattattacgaagatctaaaaatgggaatgaagttc
gtcagtgatgaacattatgacgaaaatgaagatgacttagtttcacatgtagatggttcc
gtaatttccaggagggagtggtatgtttag
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