Sus scrofa (pig): 100518296
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Entry
100518296 CDS
T01009
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04721
Synaptic vesicle cycle
ssc04724
Glutamatergic synapse
ssc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100518296 (SLC1A6)
04721 Synaptic vesicle cycle
100518296 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100518296 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100518296 (SLC1A6)
Transporters [BR:
ssc02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
100518296 (SLC1A6)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
100518296
NCBI-ProteinID:
XP_003123477
Ensembl:
ENSSSCG00000013833
UniProt:
A0A4X1UYC0
F1SAN3
LinkDB
All DBs
Position
2:62601763..62623597
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AA seq
564 aa
AA seq
DB search
MSSHGNSLFLRESGQRLGRVGWLQRLQESLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETIPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRLVTRTIVRTDNGSEPGTSMPPSSSLENGTSLLENV
TRALGTLHEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHACGILPL
IYFLITHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacggcaacagcctgtttctgcgggagagcggccagcggctcggccgggtg
ggctggctgcagcggctgcaggaaagcctgcagcagagagcgctgcgcacgcgcttgcgc
ctgcagaccatgacacgcgagcacgtgctgcgcttcctgcgccggaatgccttcatcctg
ctgacagtcagtgctgtggtcattggggtcagcctggcctttgccctgcgcccataccag
ctcagctaccgccagatcaagtacttttcttttcctggagagcttctcatgaggatgctg
cagatgctggtgctgccactcattgtctccagtctggtcacaggtatggcgtccctggat
aacaaggcaacagggaggatggggatgcgggcagctgtgtactacatggtgaccacagtc
atcgcagtcttcatcggcatcctcatggtcaccatcatccatcctgggaagggctccaag
gaggggctgcaccgagagggccggatcgagaccatccccacagctgatgccttcatggac
ctggtcagaaatatgtttccacccaaccttgtggaggcctgcttcaaacagtttaagacg
cagtacagcacaaggttggtaaccaggaccattgtgaggacagataatggatctgagccg
ggcacctccatgcctccttcatcctccttggagaatggaaccagcctcctggaaaacgtc
acacgggccttgggcaccctgcacgaggtgctgagctttgaggagactgtgcctgtgcct
ggctcggctaatggcatcaatgctctgggccttgtggtcttctcggtggcctttgggctg
gtcatcggtggcatgaaacacaagggccgagtcctgcgggacttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacctgtgggcatcctgttc
ctgattgctggcaagatcctagagatggaagacatggctgtcctggggggtcagctgggc
atgtacaccctgaccgtcatcgtgggtttgttccttcatgcctgcggcatcctgcccctc
atctacttcctcatcacccatcgaaatcctttccccttcattgggggcatcctgcaggcc
ctaatcactgccatgggcacatcttccagctctgcgacactgccaatcaccttccgctgt
ctggaggagggcctgggtgtggaccgccgcatcaccaggttcgtgctgcccgtgggggcc
actgtcaacatggacggcaccgccctctatgaggccctggctgccatcttcattgcccaa
gtcaacaactatgagcttaacctgggccagatcacaactatcagtatcacggctacagca
gccagtgttggggctgctggcatcccccaggcaggtctggtcaccatggtcattgtgctc
acctcggttggcctgcccactgaagacatcacacttattatagctgtggactggttcctt
gaccgacttcgcacgatgaccaatgtgctgggggactctattggagcagcggtcattgag
catttgtctcagcgggagctggagcttcaggaagctgaactcaccctccccagcctgggg
aagccctacaagtcgctcatggcacaagagaagggggcgtccaggggacggggaggcaat
gaaagtgccatgtga
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