Sus scrofa (pig): 100518430
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Entry
100518430 CDS
T01009
Symbol
IRX6
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100518430 (IRX6)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100518430 (IRX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Prothymosin
Myc_N
MRP-S32
Motif
Other DBs
NCBI-GeneID:
100518430
NCBI-ProteinID:
XP_013850097
Ensembl:
ENSSSCG00000002830
LinkDB
All DBs
Position
6:complement(30198948..30204587)
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AA seq
450 aa
AA seq
DB search
MSFPHFGHPYGSASQFLVSASSSATCCESAPRSVPDVASGSTPAAALCCASYDSRLLGSA
RPELGAALGIYGAPYSAAAAAQSYPGYLPYSPEPPALYGALNPQYEFKEAAGTFTPGLGQ
PGAYYPYESTLGQYQYDRYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWVPKNKGGEERKEDGAAEELLGCLNGDTK
DVTASQERQEARGLRLSDLEDLEDEEEEADEEEAVVTATDRLAELHKDTLSLPAAAAAAP
CAADREGRPERRECSLAAPRFSFTEPPRSGEADFLRAEPGGPTLTMHYPCREKPRIWSLA
HTAAASGVEGAPPTLPRPRSSERHLIPGQPPGXRRATRVPRDSACEESSRIAKAFGNPTF
ALQGLPLNCAPCPRRREPAVQCQYPSGAEG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcactttggacacccctatggcagcgcttcccagtttttggtgtctgca
agttccagcgccacttgctgcgaatccgccccgcgctccgtcccagatgtggcctcaggc
tccaccccggcggcggcgctctgctgcgcttcctacgacagtcggctgctggggagtgcg
aggcccgagctgggcgcggccctgggcatatatggagctccctactcggctgctgcagct
gcccagagctacccaggctacctgccctacagcccggagccgcccgctctgtacggggcg
ctgaatccacagtatgaatttaaagaggcggcagggacctttacacctggcctggggcaa
ccgggagcctattatccctatgagtcgactctggggcagtaccagtatgaccggtatggt
gcggtggagttgagtggcgctgggcgcagaaagaacgccacccgggagaccactagcacg
ctcaaggcctggctgaacgagcaccgcaagaacccctaccccaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaacgcg
cgccggcgcctcaagaaggagaacaagatgacgtgggtgcccaagaacaaaggcggggag
gagaggaaggaggacggtgcagcagaggaattgctgggctgcctaaatggggacaccaaa
gacgttactgcgagccaggagagacaggaggctcgggggctccggctgagtgacttggag
gacctggaagatgaggaggaggaggcggatgaagaggaggcagtggtcacagctacggac
cggctggctgaactccataaagacactctgtcgctgccagcggcggcggcggcggcgccc
tgtgcagcggatcgagagggccggccagagcgcagggagtgcagtctggcggcgccccgc
ttctccttcactgagccccccagatcaggagaagccgacttcctccgggcggagccagga
ggccccacgttgaccatgcactacccctgcagggagaaaccgcgcatctggtctctggcg
cacaccgcggcagccagcggcgtcgagggtgcacctccaaccctgcccaggccacgaagt
tctgagcgccatctgatccccggacagcctccaggcncccggcgcgccacccgcgtcccc
agagactccgcatgcgaagagtcttcccgaatagccaaagcctttggaaaccccacgttt
gccctacagggcctgccgctgaactgtgcgccctgcccgcggcggagggagcccgcagta
cagtgccagtacccttcaggagcagaaggttag
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