Sus scrofa (pig): 100518457
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Entry
100518457 CDS
T01009
Symbol
RARS2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100518457 (RARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssc01007
]
100518457 (RARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100518457 (RARS2)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100518457 (RARS2)
Enzymes [BR:
ssc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
100518457 (RARS2)
Amino acid related enzymes [BR:
ssc01007
]
Aminoacyl-tRNA synthetase
Class I (G)
100518457 (RARS2)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100518457 (RARS2)
Prokaryotic type
Other AARSs
100518457 (RARS2)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100518457 (RARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Motif
Other DBs
NCBI-GeneID:
100518457
NCBI-ProteinID:
XP_020945502
Ensembl:
ENSSSCG00000004303
ENSSSCG00000004305
UniProt:
A0A480V4Q3
LinkDB
All DBs
Position
1:complement(55906508..55982094)
Genome browser
AA seq
578 aa
AA seq
DB search
MACGFRRSIACQLSRVLDLPPENLIKSISAVPISRKEEVADFQLSVDSLLENNNDHSRPD
IQIQAMRLAEKLKCDTVVSEISTGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFS
GLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGL
LGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADNKNVAKSAHEFFQRLELGDAQALAL
WRKFRDLSIDEYIRIYKRLGVHFDEYSGESFYREKSQEVLKLLDSKGLLQKTIKGTAVVD
LSGNGDPSSVCTVMRSDGTSLYATRDIAAAIDRMEKYNFDEMIYVTDKGQKKHFQQVFQM
LHIMGYDWAERCLHVPFGVVQGMKTRRGDVTFLEDVLNEIRLRMLQNMASIKTTKELENP
QETAERVGLAALIIQDFRGLLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSLEETFGCG
YLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHKTLH
IRNSPPEVAGARLHLFRAVRSVLANGMKLLGITPVCRM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcggcttccgcaggtccatcgcgtgtcagctttccagagtgttggatctccca
ccagaaaacttgatcaagtcaatatctgcagttccaatttccagaaaagaagaagtagct
gactttcaactttctgtggattctctactggaaaacaacaatgaccattcaagaccagac
attcaaattcaagccatgagactggcagagaagctaaaatgtgatacagtggtcagtgaa
atcagcactggtcaagggaccgtaaattttaaaataaacagagaactgttaacaaagaca
gtgctgcagcaggtgattgaagatggctcaaaatatggattaaaaagtgagcttttttct
ggccttccccagaagaagattgtggttgaattcagttcgccaaatgttgccaaaaaattt
catgttggacatttgcgttctaccatcataggaaattttatagcaaatctcaaagaagcg
ttaggacatcaagtaacaagaataaattatctcggagattggggcatgcagtttggtctt
ctgggaactggcttccagctgtttggctatgaagaaaaactacagtccaatcctttgcag
catctctttgaagtttatgtacaagttaataaggaggcagcagacaataaaaatgtagca
aaatcagcacacgagttcttccagcgattggaactgggtgacgcgcaagcacttgcactg
tggcggaagtttcgggacctgagcatagacgagtacattcggatttacaagcgtctagga
gtacactttgatgaatattcaggagaatcattttatcgtgaaaaatcccaagaagtctta
aagttgctggacagtaaaggactcctacagaaaacaataaaaggcactgctgttgtggat
ctctcaggaaatggtgacccctcctcagtttgtaccgtaatgcgaagcgacgggacttct
ctctatgcaaccagagatattgcagctgctatagatcgaatggaaaagtataattttgat
gaaatgatttatgtgacagataaggggcaaaaaaagcattttcagcaagtattccaaatg
ctgcacatcatgggctatgactgggcagaaagatgcctgcatgtgccctttggggtggtg
cagggaatgaagacacgaagaggagatgttacttttctggaagatgttttaaatgagatt
cgattgaggatgctgcagaacatggcttctattaaaactaccaaagaactggagaaccca
caggagacagcagagagggtcgggctcgcagccctcattattcaggacttcagaggttta
ctgttatctgactatcagttcagctgggaccgagttttccagagtcgaggggacacagga
gtcttcctacagtatacacacgcccgcctccacagtttggaagagacttttggatgtggt
tatctaaatgacttcaacactgcttgcttacaagagccacagtcggtttccattctccag
catcttctcaggttcgatgaggtgctttataggtcatctcaggaccttcaacccaggcat
atcgtcagttaccttctaactctaagtcatcttgcagctgtggcacacaaaacactgcac
ataagaaacagtcctcctgaagtggccggggccagacttcatcttttcagagctgtccgc
tctgtccttgccaatggaatgaaacttcttggaataacacctgtatgtaggatgtaa
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