Sus scrofa (pig): 100518611
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Entry
100518611 CDS
T01009
Symbol
IRX3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3 isoform X2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100518611 (IRX3)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100518611 (IRX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
100518611
NCBI-ProteinID:
XP_003127029
Ensembl:
ENSSSCG00000002831
UniProt:
A0A8D1U040
F1RF01
LinkDB
All DBs
Position
6:31044919..31049067
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AA seq
502 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERPGAAAGGGSAGARGGPGAGTSELAASGSLSNVLSSVYGAPY
AAAAAAAAAAQGYGAFLPYAAELPIFPQLGTQYELKDSPGVQHPAAAAGFPHPHPAFYPY
GQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDSKRELELEEEELGGEEEDT
GGEGLVDDDEDEEIDLENLDGTAAGPELALTGAAHRDGDLGLESISDSKNSDSDDSSEGL
EERPLPVLSLAPVPPPVAAALPSPPSPSAGLDPCAAAPAPASALQKPKIWSLAETATSPD
NPRRSPPGAGGSPPGAAVAPPALQLSPAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPPGP
RPHPLSLLGSAPPHLLGLPGAAGHPAAAAAAFARPAEPEGGTDRCSALEVEKKLLKTAFQ
PVPRRPQNHLDAALVLSALSSS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtacatccgcccgatctacccgcccgagcgcccc
ggggccgccgccggcggtgggagcgccggggcccggggcggcccgggagccggaacctca
gagctggccgcctcggggtccctgtccaacgtgctctcgtccgtgtacggggcgccctac
gccgcggcggccgcggcagccgccgctgcccaaggctacggcgccttcctgccctacgcg
gcggagctgcccatcttcccgcagctgggcacgcagtatgagctgaaggacagtccgggg
gtgcagcatccggctgcggccgccgggtttccgcacccgcaccccgccttctacccatac
ggccagtaccagttcggggacccgtcccgtcccaagaacgcgacccgggagagcactagc
acactcaaggcctggctgaacgagcaccgcaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaagatgacatgggcgccccgcagccgcaccgac
gaggagggcaacgcttacgggagcgagcgcgaggaggaggacgaagaggaagatgaagaa
gacagcaaacgcgaactggagctggaggaggaggagctcgggggggaggaggaggacact
gggggcgagggcctggtggacgacgatgaagacgaggagatcgatttggagaacttagac
ggtacggccgcagggcctgagctggccctgactggggcagcgcacagggacggcgacctc
ggcctggaatccatttcagactccaagaatagcgactcagatgacagttccgagggcttg
gaggagcgtccactgcccgtcctgagtctggccccagtgccaccgccggtggccgcggct
ctgccatctcctccttcgccctcagcgggcctggacccctgcgctgctgcaccagcgccc
gcctcggccttgcagaaacccaagatctggtccctggccgagacggccacaagcccggac
aatccgcgccgctcgcctccaggcgcggggggttctccccccggggcagccgtcgcgccc
ccagccctgcagctctctcccgccgccgccgcagccgcagctcacagactcgtctcagcg
ccgctaggcaagttccccgcttggaccaacaggccgttccccggcccgccgcccggccca
cgcccgcacccgctctccctactcggctcggcccctccacacctgctgggacttcccgga
gccgcgggccacccggctgccgcagccgccgccttcgctcggccggcggagcccgagggc
ggaacagatcgctgtagtgccttggaagtggagaaaaagttactcaagacagctttccaa
cccgtgcccaggcggcctcagaaccacctggacgctgctctggtcttatcggctctctcc
tcatcttaa
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