Sus scrofa (pig): 100519078
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Entry
100519078 CDS
T01009
Symbol
TNPO2
Name
(RefSeq) transportin-2 isoform X3
KO
K18727
transportin-2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100519078 (TNPO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100519078 (TNPO2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100519078 (TNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
Arm
HEAT_2
TOR1L1_N
IBN_N
Cnd1
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
Adaptin_N
MMS19_C
UNC45-central
SCD
Dopey_N
INTS7_N
TPR_TTI1_C
RTP1_C1
DUF2573
Motif
Other DBs
NCBI-GeneID:
100519078
NCBI-ProteinID:
XP_003123364
Ensembl:
ENSSSCG00000013726
UniProt:
A0A4X1U7M8
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All DBs
Position
2:66267776..66288763
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AA seq
897 aa
AA seq
DB search
MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLPHEAERPDGSEDAED
DDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGA
IAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDMHLKPLMT
ELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYD
AIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLP
YCEPVYQRCVTLVQKTLAQAMMYTQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLV
ARSNIMTLLFQCMQDSMPEVRQSSFALLGDLTKACFIHVKPCIAEFMPILGTNLNPEFIS
VCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTGRLTSPSAIPAI
TIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFI
FFCDAVASWVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAFYGV
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggactggcagccagacgagcagggcctgcagcaggtcctgcagctgctcaaagactcg
cagtcgcccaacacagccacacagcgcatcgtgcaggataaactcaaacaactgaaccag
tttcctgacttcaacaactacctgatattcgtcctgaccagacttaagtcagaagatgag
ccaactcgctctctcagtggcctcatcctaaagaacaatgtgaaggcgcattaccagagc
tttccaccacctgtggccgacttcatcaaacaggagtgtctcaacaacattggcgatgcc
tcctcgctcatccgtgccaccataggcattctcatcaccaccatcgcttccaagggtgag
ctgcagatgtggcctgagctgttgccccagctgtgcaacctactcaactcggaggattac
aacacatgtgagggagcctttggagccctgcagaagatctgcgaagactcatctgaactt
ctagacagcgatgccctcaacaggccgctcaacatcatgatccccaagttcctacagttc
tttaagcactgcagccccaagatccggtcccatgccattgcctgtgtgaatcagttcata
atggaccgggcccaggcactgatggacaacatcgacactttcatcgagcatttgttcgcc
ttggctgtggacgatgaccccgaggtgcggaagaacgtgtgccgggcgctggtgatgctg
ctggaagtgcggatcgacaggctcatcccccacatgcacagcattatccagtacatgctg
cagaggacccaggaccacgatgagaacgtggcccttgaggcctgcgagttctggctgacg
ctggctgagcagcccatctgcaaggaagtcctggcctcccacctggtccagttgatcccc
atcctggtaaatgggatgaagtactcggaaatcgacatcatcctgctcaagggggacgtg
gaggaggatgaagcagtccccgacagcgagcaggacatcaagccacgtttccacaagtca
cgcacagtgacactgccccatgaggctgagaggcctgatggctctgaggacgcagaggat
gacgatgatgacgatgctctgtccgactggaatctgaggaagtgctcagcagctgcgctg
gacgttctggccaacgtcttccgggaggaactgctgccccacctgctgcccctgctcaag
ggtctcctcttccatcccgagtgggtggtcaaggagtcaggcatcctggtgctgggtgcc
attgccgagggctgcatgcagggcatggtgccctacctgccagagctgatcccacacctc
atccagtgcctgtcggacaagaaggccctggtccgctccatcgcctgctggacactgagc
cgctatgcccactgggtggtcagccagcctcccgacatgcatctcaagcctctgatgaca
gagctgctcaagcgtatcctggacggcaacaagagggtgcaggaggcggcctgcagcgcc
ttcgccaccctggaggaggaggcctgcacggagctggtgccttacctcagctacatcctg
gacaccctcgtttttgcctttggcaagtaccagcacaagaacctgctcatcctctatgat
gccatcggcaccctggccgactctgtgggccaccacctcaaccaaccggaatatatccag
aagctgatgcctccactgatccagaagtggaatgagctcaaggacgaagacaaggacctc
ttccctctgctagagtgcctgtcatcagtggccaccgccctgcagagtggcttcctgccc
tattgtgagcctgtgtaccaacgctgcgttaccctggtgcagaagacactggcccaggcc
atgatgtacacccagcaccctgagcagtacgaggcacctgacaaggacttcatgatcgta
gcactggacctactcagcggcctggctgagggcctgggtgggcacgtggagcagctggta
gcccgcagcaacatcatgacactgctttttcagtgcatgcaggactcgatgcctgaggtc
cggcagagctccttcgccctcctgggagacctcaccaaagcctgcttcatccacgtcaag
ccctgtatcgccgagtttatgcccatcttgggcaccaacttgaaccctgagttcatctct
gtctgcaacaatgccacctgggccattggtgagatctgcatgcagatgggggcagagatg
cagccctatgtgcagatggtcctcaacaacctggtggagatcattaaccggcccaacacg
cccaagacgctgctggaaaacacaggtcgcctgacgagtccctctgccattccagccatc
accatcggccgcctgggctacgtgtgcccacaggaggtggcacccatgctgcagcagttc
atccggccttggtgcacatccctcaggaacatcagggacaacgaggagaaggactcagcc
ttccgaggcatctgcatgatgataggcgtcaaccccgggggcgttgtgcaggactttatt
ttcttctgcgacgctgtagcctcctgggtgagcccgaaggatgaccttcgggacatgttt
tataagatcctccacggcttcaaagaccaagttggggaggagaactggcagcagttctca
gagcagtttccgccgctgcttaaggagaggctagctgccttctatggggtctag
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