KEGG   Sus scrofa (pig): 100519078
Entry
100519078         CDS       T01009                                 
Symbol
TNPO2
Name
(RefSeq) transportin-2 isoform X3
  KO
K18727  transportin-2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100519078 (TNPO2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100519078 (TNPO2)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100519078 (TNPO2)
SSDB
Motif
Pfam: HEAT_EZ HEAT Arm HEAT_2 TOR1L1_N IBN_N Cnd1 Vac14_Fab1_bd HEAT_EF3_N PDS5 Adaptin_N MMS19_C UNC45-central SCD Dopey_N INTS7_N TPR_TTI1_C RTP1_C1 DUF2573
Other DBs
NCBI-GeneID: 100519078
NCBI-ProteinID: XP_003123364
Ensembl: ENSSSCG00000013726
UniProt: A0A4X1U7M8
LinkDB
Position
2:66267776..66288763
AA seq 897 aa
MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIMDRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLPHEAERPDGSEDAED
DDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKGLLFHPEWVVKESGILVLGA
IAEGCMQGMVPYLPELIPHLIQCLSDKKALVRSIACWTLSRYAHWVVSQPPDMHLKPLMT
ELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLILYD
AIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLP
YCEPVYQRCVTLVQKTLAQAMMYTQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLV
ARSNIMTLLFQCMQDSMPEVRQSSFALLGDLTKACFIHVKPCIAEFMPILGTNLNPEFIS
VCNNATWAIGEICMQMGAEMQPYVQMVLNNLVEIINRPNTPKTLLENTGRLTSPSAIPAI
TIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFI
FFCDAVASWVSPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAFYGV
NT seq 2694 nt   +upstreamnt  +downstreamnt
atggactggcagccagacgagcagggcctgcagcaggtcctgcagctgctcaaagactcg
cagtcgcccaacacagccacacagcgcatcgtgcaggataaactcaaacaactgaaccag
tttcctgacttcaacaactacctgatattcgtcctgaccagacttaagtcagaagatgag
ccaactcgctctctcagtggcctcatcctaaagaacaatgtgaaggcgcattaccagagc
tttccaccacctgtggccgacttcatcaaacaggagtgtctcaacaacattggcgatgcc
tcctcgctcatccgtgccaccataggcattctcatcaccaccatcgcttccaagggtgag
ctgcagatgtggcctgagctgttgccccagctgtgcaacctactcaactcggaggattac
aacacatgtgagggagcctttggagccctgcagaagatctgcgaagactcatctgaactt
ctagacagcgatgccctcaacaggccgctcaacatcatgatccccaagttcctacagttc
tttaagcactgcagccccaagatccggtcccatgccattgcctgtgtgaatcagttcata
atggaccgggcccaggcactgatggacaacatcgacactttcatcgagcatttgttcgcc
ttggctgtggacgatgaccccgaggtgcggaagaacgtgtgccgggcgctggtgatgctg
ctggaagtgcggatcgacaggctcatcccccacatgcacagcattatccagtacatgctg
cagaggacccaggaccacgatgagaacgtggcccttgaggcctgcgagttctggctgacg
ctggctgagcagcccatctgcaaggaagtcctggcctcccacctggtccagttgatcccc
atcctggtaaatgggatgaagtactcggaaatcgacatcatcctgctcaagggggacgtg
gaggaggatgaagcagtccccgacagcgagcaggacatcaagccacgtttccacaagtca
cgcacagtgacactgccccatgaggctgagaggcctgatggctctgaggacgcagaggat
gacgatgatgacgatgctctgtccgactggaatctgaggaagtgctcagcagctgcgctg
gacgttctggccaacgtcttccgggaggaactgctgccccacctgctgcccctgctcaag
ggtctcctcttccatcccgagtgggtggtcaaggagtcaggcatcctggtgctgggtgcc
attgccgagggctgcatgcagggcatggtgccctacctgccagagctgatcccacacctc
atccagtgcctgtcggacaagaaggccctggtccgctccatcgcctgctggacactgagc
cgctatgcccactgggtggtcagccagcctcccgacatgcatctcaagcctctgatgaca
gagctgctcaagcgtatcctggacggcaacaagagggtgcaggaggcggcctgcagcgcc
ttcgccaccctggaggaggaggcctgcacggagctggtgccttacctcagctacatcctg
gacaccctcgtttttgcctttggcaagtaccagcacaagaacctgctcatcctctatgat
gccatcggcaccctggccgactctgtgggccaccacctcaaccaaccggaatatatccag
aagctgatgcctccactgatccagaagtggaatgagctcaaggacgaagacaaggacctc
ttccctctgctagagtgcctgtcatcagtggccaccgccctgcagagtggcttcctgccc
tattgtgagcctgtgtaccaacgctgcgttaccctggtgcagaagacactggcccaggcc
atgatgtacacccagcaccctgagcagtacgaggcacctgacaaggacttcatgatcgta
gcactggacctactcagcggcctggctgagggcctgggtgggcacgtggagcagctggta
gcccgcagcaacatcatgacactgctttttcagtgcatgcaggactcgatgcctgaggtc
cggcagagctccttcgccctcctgggagacctcaccaaagcctgcttcatccacgtcaag
ccctgtatcgccgagtttatgcccatcttgggcaccaacttgaaccctgagttcatctct
gtctgcaacaatgccacctgggccattggtgagatctgcatgcagatgggggcagagatg
cagccctatgtgcagatggtcctcaacaacctggtggagatcattaaccggcccaacacg
cccaagacgctgctggaaaacacaggtcgcctgacgagtccctctgccattccagccatc
accatcggccgcctgggctacgtgtgcccacaggaggtggcacccatgctgcagcagttc
atccggccttggtgcacatccctcaggaacatcagggacaacgaggagaaggactcagcc
ttccgaggcatctgcatgatgataggcgtcaaccccgggggcgttgtgcaggactttatt
ttcttctgcgacgctgtagcctcctgggtgagcccgaaggatgaccttcgggacatgttt
tataagatcctccacggcttcaaagaccaagttggggaggagaactggcagcagttctca
gagcagtttccgccgctgcttaaggagaggctagctgccttctatggggtctag

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