Sus scrofa (pig): 100519258
Help
Entry
100519258 CDS
T01009
Symbol
CPT1C
Name
(RefSeq) carnitine O-palmitoyltransferase 1, brain isoform isoform X2
KO
K19524
carnitine O-palmitoyltransferase 1, brain isoform [EC:
2.3.1.21
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00071
Fatty acid degradation
ssc01212
Fatty acid metabolism
ssc03320
PPAR signaling pathway
ssc04148
Efferocytosis
ssc04152
AMPK signaling pathway
ssc04714
Thermogenesis
ssc04920
Adipocytokine signaling pathway
ssc04922
Glucagon signaling pathway
ssc04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
100519258 (CPT1C)
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
100519258 (CPT1C)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100519258 (CPT1C)
09150 Organismal Systems
09152 Endocrine system
04922 Glucagon signaling pathway
100519258 (CPT1C)
04920 Adipocytokine signaling pathway
100519258 (CPT1C)
03320 PPAR signaling pathway
100519258 (CPT1C)
09159 Environmental adaptation
04714 Thermogenesis
100519258 (CPT1C)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
100519258 (CPT1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100519258 (CPT1C)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
100519258 (CPT1C)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100519258 (CPT1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
PaaA2
Motif
Other DBs
NCBI-GeneID:
100519258
NCBI-ProteinID:
XP_013854109
Ensembl:
ENSSSCG00000024872
LinkDB
All DBs
Position
6:54732701..54747706
Genome browser
AA seq
665 aa
AA seq
DB search
MGGPDLHTHVALRLLLSYHGWLLETHGVMSSPTKTWLALVRIFSGRHPMLFSYQRSLPRQ
PVPAVQDTVRKYLESVRPVLCEEDFEWISALAREFLKLQASLLQWYLQLKYWWASNYVSD
WWEEFVYLRSRNSLMVNSNYYMMDFLNVTPTPVQAARAGNAVHALLLYRHRLNRQEIFPT
LLMGMRPLCSAQYEKIFNTTRIPGVHRDHIHHLRDSRHVAVFHRGRFFRVGTHSQSGLLS
PRALEQQFQRILDDPSPACPHEEHLAALTAAPRDMWAQVRKSLKTQAEEALEAVEGAAFF
VSLDSEPAGDAAGDTPEPSGDSAASLDAYAHALLAGRGHDRWFDKSFSLIIFSNGKLGLS
VEHAWADCPISGHMWEFTLATECFQLGYSADGHCKGHPDPSLPQPQRLHWDLPDKIHLSI
SLALRGAQALAENIDCHVFPFSHFGKSFIKRCHLSSDSFIQTALQLAHFRDRGRFCLTYE
SAMTRLFLEGRTETVRSCTREACSFVRAMEHQEKTDPQCLALFRLAVDKHQALLKAAMSG
QGVDRHLFALYIVSQFLRLQSPFLDQVHSEQWQLATSQIPVQQMHLFDIHNYPDYVSSGG
GFGPADEHGYGVSYIFTGEDTITFHISSKKSSTRTDSHRLGQHIRDALLDVAALFQEGQH
LKRRA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggggggccctgatcttcacactcacgtggccctgaggctccttctgtcctaccacggc
tggctccttgaaacccatggggtcatgtcctcacccaccaagacctggctggctctggtt
cgcatcttctccggccgccacccaatgctcttcagttaccagcgctccctgcctcgccag
cctgtgcccgctgtgcaggacaccgtgcgcaagtatctggagtctgtccgacctgtgctc
tgtgaagaggacttcgagtggatctcggccctagcacgggaattcctgaagctgcaggca
tcgctgctgcagtggtacctgcagctcaaatattggtgggcgtccaattatgtcagtgac
tggtgggaagagtttgtgtacctgcgctcccggaactcactgatggtgaatagcaactac
tacatgatggacttcctgaacgttaccccaactcccgtccaggctgctcgtgcagggaac
gcggtccacgccctcctcctgtaccgccaccgcctgaaccgccaggagatctttccgacg
ttgctgatgggaatgcggcccttatgctctgcccagtatgagaagatattcaacacgacg
cgaattcctggggtccacagagaccacatccaccacctccgtgacagccgacacgtggcc
gtcttccaccggggccgattcttccgcgtggggacgcactcccaaagcggcctgctttcc
ccaagggccctggagcagcagttccagcgaatcctggatgacccctctcccgcctgcccc
cacgaggagcatctggcggctctgaccgcggctccgagggacatgtgggctcaggtgagg
aagtccctaaagacccaggcagaggaggccctggaggctgtggaaggggctgctttcttt
gtatcactggactctgagcccgcgggggacgctgcaggggacactcctgagccctcgggg
gactccgcagcttccctagatgcctatgcccatgccctgctggccggcaggggccatgac
cgctggtttgacaaatccttctccctaatcatcttctccaacgggaagctgggcctcagc
gtggaacacgcgtgggcggactgccccatctcaggacacatgtgggagttcactctggcc
acagaatgctttcagctgggctactcggcagatggtcactgcaagggccatcctgaccca
tcgctgccccagccccagcggctgcactgggaccttccagacaagatccatctatccatc
tctctagccctgaggggagcccaggccttggctgaaaacatcgactgccacgtcttcccc
ttctcccactttggcaagagcttcatcaaacgctgccacctgtcttcagacagcttcatc
cagacggccttgcagctggcccacttccgggacaggggtcgattctgcctgacctatgag
tcagccatgactcgcctgttcctggaaggccggacagagacggtgcgttcttgcacgagg
gaggcctgcagctttgtgagagccatggaacaccaagagaagacagacccacagtgcctc
gccctgttccgcctggcggtggacaagcaccaggctctgctgaaggcagcgatgagcggc
cagggggtcgaccgccacctctttgctctctacatcgtgtcgcaattcctccgcctacag
tcgcccttcctggaccaggttcactcggagcagtggcagctggccaccagccagattcct
gttcagcaaatgcacctgtttgacatccacaactatccggactacgtttcctctggtggt
ggatttgggcctgccgatgagcatggctatggtgtttcttacatcttcactggggaggac
acgattaccttccacatctctagcaaaaaatcaagcacaagaacggactcccaccggctg
ggccagcacatcagggatgcattgctggacgtggcagccctattccaggaggggcagcat
cttaagcgccgggcctga
DBGET
integrated database retrieval system
