Sus scrofa (pig): 100519394
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Entry
100519394 CDS
T01009
Symbol
MBD5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100519394 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100519394 (MBD5)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100519394 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
100519394 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
100519394
NCBI-ProteinID:
XP_020931757
LinkDB
All DBs
Position
15:complement(3649859..4096459)
Genome browser
AA seq
1745 aa
AA seq
DB search
MNGGKECDGGDKDGGLPAIQVPVGWQRRVDQNGVLYVSPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTNATPVVPSRAATPRSARNKSHEGITNSVMPECKNPFKLMIGSSNAMGR
LYVQELPGSQQQELHPVYPRQRLGSSEHGQKSPFRGSHGGLPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRSNPGFHGAPNSSPIHLNRTPLSPPSVMLHGSPIQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSTNMEIPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPMNQNPVIINPTSFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNHG
SHVQRVQHSASTSLSPSPVTSPVHMMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPLGPQ
ATCSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGMSNVLNTPSSAA
FPTASAGSGSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNSS
SSSNSGAVAGSGNTEGHSTLNTMFPPTANMLLPTGEGQSGRAALRDKLMSQQKDSLRKRK
QPPTTVLSLLRQSQMDSSAVPKPGPDLLRKQGQGSFPISSMSQLLQSMSCQSSHLSSNST
PGCGGSNTALPCSANQLHFTDPSMNSTVLQNSLTQNIPLRGEAVHCHNANTNFVHSNSPV
PNHHLAGLINQIQASGNCGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQT
SSEAGCSGPSSSIAIAGTNHPAITKTTSVLQDGVIVTTAAGNPLQSQLPIGSDFPFVGQE
HALHFPSNSTSNNHLPHPLNPSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEINL
HPLGFLNPNVNAALAFLSSDMDGQVLQPVHFQLLAALLQNQAHAAAMLPLPSFNLTISDL
LQQQNTPLPSLTQMTAPPDHLPSNQSENSQAETLLTSPLGNPLPSFAGSDTTFNPLLLPA
VTGASGLMTLNPQLLGGVLNSASANTANHPEVSIATSSQATTTTTTTSSAVAALTVSTLG
GTAVVSMAETLLNVSNNAGNTSGPAKLNSNSVVPQLLNPLLGTGLLGDMSSINNTLNNHQ
LTHLQSLLNNNQMFPPNQQQQQLLQGYQNLQAFQGQSTIPCPANNNPMACLFQNFQVRMQ
EDAALLNKRISTQPGLTALPENPNTTLPPFQDTSCELQSRIDPSLSQQVKDGLVVGGQGD
ASVDAIYKAVVDAASKGMQVVITTAVNSTTQISPIPALSAMSAFTASIGDPLSLPSAVSA
VIHGRNMSSVDHDGRLRNARGARLPSNLDHGKNSNEGDGFEYFKSASCHTSKKQWDGEQS
PGGERNRWKCEEFLDHPGHIHNSPCHERPNNVSTLPFLPGEQHPILLPPRNCQGDKILEE
NFRYNNYKRTMMSFKERLENTVERCAHINGNRPRQSRGFGELLSTTKQDLVLEEQSPSSS
NSLESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEDDLRNPDSPSSNELIHYRPRT
FNVGDLVWGQIKGLTSWPGKLVREDDVHSSCQQSPEEGKVWVMWFGVHAFTQVEPEKLKT
LTEGLEAYSRARKRNRKSGKLNNHLEAAIHEAMSELDKMSGTVHQIPQGDRQMRPPKPKR
RKISR
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggcaaggagtgtgacggaggggacaaggatggaggtcttccagctatacaa
gttcctgtgggttggcagcgacgcgtggatcaaaatggagtgctttatgtcagtcccagt
gggtctttgttatcttgcttggagcaggttaaaacatacctgcttactgacggaacatgc
aagtgtggcttggaatgtcctcttattcttcccaaggtgtttaattttgatcctggagct
gctgtgaaacagagaactgcagaagatgttaaagcagatgaagatgtcacaaagctatgc
atacataaaagaaaaatcattgcagtggccacacttcataaaagcatggaagccccacat
ccttctctggtgctcaccagtcccggaggaggaacaaatgcaactccagtagtaccttca
cgggccgcaactccaagatctgcaagaaataaatctcatgaaggaattacaaattctgta
atgcctgaatgtaagaatcctttcaagttaatgattggatcatcaaatgccatgggaagg
ctatatgtacaagaactgcctggaagccagcaacaagaactccaccctgtctacccccgg
caaagattgggcagcagcgaacacggacagaaatctccattccgtggcagccatggaggc
ctgcccagcccagcgtcatcaggttcccagatatatggagatggctcaatctctccaagg
actgacccacttggaagccctgatgttttcacaagaagtaatcctggttttcatggagct
cccaattccagtcctattcacctgaataggactcctctttctccaccttcagtaatgcta
catggttctcctatacagtcatcttgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgactacaaagagtccagtaatgaaaaaaccaatgtgtaatttttcaactaat
atggaaataccacgagcaatgtttcaccacaaaccaccccaaggcccacctccccctcct
ccaccttcttgtgctcttcagaaaaagccattaacatccgaaaaagatccacttggcatt
cttgaccctattcctagtaaaccgatgaatcagaaccctgttatcattaatccaactagt
ttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgctgtt
gttcctttgccaagtaatctccctttgccaactgtaaaacctggtcacatgaatcatggg
agtcatgtacagagagttcagcattcagcttcaacctccctgtccccttctccagtgaca
tccccagtgcacatgatggggactggaattggaaggattgaggcatcgccccaaagatca
cgctcatcttccacatcatcagatcacggaaatttcatgatgccacctctaggaccccag
gccacgtgtagtggtattaaggttccacccaggtcaccaaggtcaacgatagggtcccca
aggccatcaatgccatcaagcccttctaccaagtccgatggacatcatcagtacaaggat
atccctaacccattaattgctggaatgagtaatgtactaaataccccaagcagtgcagct
tttcctactgcatctgccggaagtggttctgtaaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaaccagcacaatgctgcctcctttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaacaaacttgctggtaacaacagtagc
agcagtagcaattctggagctgttgctggcagtggcaacactgaaggacatagcacttta
aacaccatgttccctcctactgccaacatgcttctcccaacaggtgaagggcaaagtggt
cgagcagcactaagagataagctgatgtctcagcaaaaagactcattgcgaaaaagaaaa
cagccacctaccacagtgttgagtttgctcagacagtctcaaatggatagttctgcagtt
cctaaacctggacccgacttgctaaggaagcagggtcagggatcgtttcccatcagttcc
atgtctcagttactacagtctatgagttgtcaaagctctcacttgagtagcaatagtacc
ccgggttgtgggggctcaaatactgctttgccttgctctgctaaccagctgcattttaca
gatcccagtatgaactccactgttcttcagaattcactgacacagaacatacctttaaga
ggggaagccgtgcactgccacaatgcaaacactaactttgttcacagtaacagtccagtc
ccaaaccaccatcttgcaggtttaatcaatcagattcaggctagcgggaactgtgggatg
ctcagtcagtcgggcatggctttaggaaattcattacatcccaacccacctcagtcaaga
atttcaacgtcctccactccagtgataccaaacagcattgttagcagctataatcaaaca
agttctgaagcaggctgttcaggaccatcatcctccatagccatagctggcaccaaccac
cccgccatcacaaagacaacatctgttcttcaagatggcgtcatagtcaccaccgcagcc
ggaaacccactgcagagtcagctgccaattgggagtgattttccatttgttggccaggag
cacgcacttcattttccatccaacagcacttcaaacaaccatcttccacaccccttgaac
cccagcctcctcagttctctacctatctctttgccagtgaatcaacagcatctcctaaac
cagaatctattaaatatcctccagccttcagcaggagaaggcaagtctgagatcaacctc
caccctttaggttttctcaacccgaatgtaaacgctgctttagcttttctctccagtgac
atggatgggcaggtcttgcagcctgttcactttcaactcttagcagccctgcttcagaac
caagcccacgcagctgccatgcttcccttgccatctttcaatctgaccatctcagatctt
ttgcaacagcaaaacacccctttaccctcattaacacagatgacagccccaccagaccat
ttgccaagcaatcagtcagagaacagccaagctgagacccttttaaccagccccctgggg
aaccctttaccaagctttgcaggcagtgacactacttttaaccccctgttactcccagct
gtcactggggcctcaggattaatgaccttgaatccccagctgttgggaggtgtcctgaac
tcggcatcggccaacaccgctaatcatccagaggtttccatagcaacttcttcccaggca
accactaccacaaccactacatcatcagcagtggcagcactgactgtctcaacacttggt
gggacagcagtggtgtcaatggcagaaacattgctgaatgtatctaataatgctgggaat
acatctggtccagctaaactcaacagtaactctgtggtgccacagctacttaaccctcta
ctggggacaggtctgcttggtgacatgtcctcaataaacaatactttgaataaccatcaa
ctgactcatctacagtcgctgttaaacaacaatcagatgtttcctccaaatcagcagcag
cagcaacttcttcaggggtaccagaatcttcaggcatttcaaggacagtccacaattcct
tgcccagctaacaataaccccatggcttgtctgtttcagaactttcaggtgagaatgcag
gaagatgcagctctcctaaacaaaagaataagcactcagccggggctcacagcacttccc
gaaaatccaaacactacacttccacctttccaagatacatcttgtgagttgcaatctcgg
attgacccatctctcagtcagcaggtgaaggatggtcttgttgtgggtggccaaggtgat
gcttctgtagatgctatttacaaagccgttgttgatgcagccagcaaaggaatgcaggtt
gtcatcaccactgcagtcaacagtacaactcagatcagccccattccagctctgagtgcc
atgagtgccttcactgcttcaattggtgaccccttaagtctccccagtgctgtcagtgcg
gtcattcatggacgaaacatgagcagtgttgatcatgatgggaggctgaggaatgcaaga
ggggctcggctgcccagcaatctggaccatgggaaaaactcaaatgaaggagatgggttt
gaatatttcaagtcagcaagttgccacacatctaaaaaacaatgggatggggagcaaagc
cctggaggggaacgaaacaggtggaagtgtgaggaatttttagatcatccaggccatatc
cacaatagtccttgtcacgaaaggcccaacaatgtctctacactgccatttctgcctggg
gaacagcacccaatactgttaccaccaagaaactgtcaaggggataaaattctggaggaa
aatttcaggtataataactacaaaagaactatgatgagttttaaggagagactagagaac
actgtggaaagatgtgcacacattaatgggaacagacctcgacagagtcggggctttgga
gagctgctgagcaccacaaagcaagacctggtcctagaggaacaatctccgagctcctca
aatagcttggaaagttctctggtcaaagactacatccattacaatggagactttaatgcc
aaaagcattaatgggtgtgtacctagcccttcagatgctaaaagcatcagtagtgaagat
gacctaaggaatccagactccccctcttcaaatgagttgatacattataggccaaggacg
ttcaacgttggcgacttggtctggggccaaatcaaaggactgacttcctggcctggaaaa
ttagtaagagaagacgacgttcacagttcttgtcaacaaagccccgaggaagggaaggtc
tgggtaatgtggtttggtgttcatgccttcactcaggtggagccggagaagttgaagaca
ctaacagaaggtttagaagcctacagccgagcccggaaaaggaacagaaaaagtggaaag
ctaaataaccatttagaagctgctattcatgaggccatgagtgaactggacaaaatgtct
gggactgttcaccaaatcccacagggagacagacaaatgagaccccccaaacccaagagg
aggaagatctccagataa
DBGET
integrated database retrieval system
