KEGG   Sus scrofa (pig): 100519604
Entry
100519604         CDS       T01009                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100519604 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100519604 (XRCC1)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100519604 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 100519604
NCBI-ProteinID: XP_005655978
Ensembl: ENSSSCG00000003055
UniProt: A0A480TZP4 A0A8D0NS74
LinkDB
Position
6:complement(50403691..50425730)
AA seq 702 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDAPYGLSFIRFHSPPDKDEAEASSQKVTRLGQFRVKEEDEST
SSLRPGALFFSRINRTPPVAASDPAGPSYAAATLQASSAASSVSPASKATGSASRAAGST
SKPQESPKGKRKLDLNQEAKKTPSKPSAQPSPPALKRPKLPAAPRTPATAPLPAPARGAA
PGKPRGEGAKPRAPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTP
DSTHLMWAPPPRVASCFRSLSLRLCILCLFFPLIPASSSRPPCPLARVLLPGSALHLSGP
TWLTPSLLPTSCAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPDSSS
EDEGGSPGGSSGDEAPKPPRQRPQTKARPPQAAGPSLPQRPPAPEETKPASPRPQDDTDI
EGEQSGQDNGAEDSGDTEDELRRVAEQKEQRQPPGQGENGEDPYAGSTDENTDNEGPPES
PDLPVPELPDFFQGKHFFLYGEFPGDERRRLSRYVTAFNGELEDYMSDRVQFVITAQEWD
PSFEEALMDNPSLVFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 2109 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtggtgtcctgcagtagccaggactcgacccactgt
gcagaaaaccttctcaaggcagacacttatcgaaaatggcgtgcagccaaggcgggcgag
aagaccatctctgtggttctccagctggagaaggaggagcagatacacagcgtggacatt
gggaatgatggctcagcctttgtggaggtgctggtgggcagctcggccggaggggctggg
gagcaagactatgaggtccttctggtcacctcatctttcatgtccccttccgagagtcgc
agtggctcaaaccccaaccgcgttcgcatttttgggcccgacaagctggtccgggcagca
gcagagaagcgctgggaccgagtcaaaattgtctgcagtcagccgtacagcaaggatgcc
ccctatggcctgagttttatacggtttcacagcccccccgacaaagacgaggccgaggcc
tcatcccagaaggtgaccaggcttggccagttccgcgtaaaggaggaggatgagagcacc
agctccctacgaccgggagcgctcttcttcagccggatcaacaggacacccccagttgca
gccagtgacccagcaggacccagctatgcagctgctacactgcaggcctccagtgcagcc
tcctcggtgtctccggcctccaaggcaacaggcagtgcctccagggcagcaggcagcacc
tccaagcctcaggagtcccccaaaggcaagaggaagctggatttgaaccaagaagcaaag
aagacccccagcaaaccgtcagcccagccctcaccccccgccctcaagagacccaaactg
ccagctgctccccggaccccagccacggccccgctccctgccccagcacggggggcagca
cctgggaagccccgaggagaaggcgccaagcccagggccccccgagctggcccgcaggag
ctggggaagatcctgcagggtgtggtggtggtgctgagtggcttccagaaccccttccgc
tcggagctccgggacaaggccctcgagctgggggccaagtatcggccagactggactccg
gacagcacgcacctcatgtgggccccgccccctcgcgttgcctcttgctttcgctccctg
tcacttcgcctctgcatcctctgcctcttcttccctctgattcctgcatcttcctctcgg
cctccctgccccttggcccgtgtccttctccctggctccgcccttcacctctcaggtccc
acctggctgacaccctcccttctccccaccagctgcgcctttgccaacacccccaagtac
agccaggtcctaggcctcggaggccgaatcgtgcgcaaagagtgggtgctggattgtcac
cgcatgcggcggcggctgccctcgcggaggtacctcatggcggggccagactcgagcagt
gaggacgaagggggctctcctggtggcagcagcggggatgaagcacccaagcctccccga
cagcgtccccagaccaaagccaggccccctcaggcagcaggacccagcttaccccagaga
cccccagccccagaagagaccaaaccagcctcaccaaggccccaggacgataccgacatc
gagggggagcagtcaggacaggacaacggggcagaagattctggggacactgaggatgag
ctaagaagggtggctgagcagaaggaacagaggcagccccctggccagggggagaacggc
gaggacccatacgcgggatccacggatgagaacacggacaacgaggggcccccagaatct
cctgacctgccagttcctgagctcccagatttcttccagggcaagcacttcttcctgtac
ggggagttcccaggggacgagcggcggcggctcagccgatatgtcacagccttcaacggg
gagcttgaggactatatgagcgaccgggtccagtttgtgatcacggcacaggagtgggac
cccagcttcgaggaagccctgatggacaacccctccctggtgttcgtccgccctcggtgg
atctacagttgcaacgagaagcagaagctacttccccaccagctgtatggggtggtgccc
caggcctga

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