KEGG   Sus scrofa (pig): 100519832
Entry
100519832         CDS       T01009                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100519832 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssc03009]
    100519832 (WDR43)
Ribosome biogenesis [BR:ssc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100519832 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_SPT8 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_like UTP15_C DUF6235 Nop14 Tricorn_2nd Zip Raftlin
Other DBs
NCBI-GeneID: 100519832
NCBI-ProteinID: XP_020943331
Ensembl: ENSSSCG00000008536
UniProt: I3LH57 A0A8D0MY85
LinkDB
Position
3:complement(110317549..110365108)
AA seq 681 aa
MAAGGGGVADPLSPAGVPCAFSPQNQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARSQAKEGPQRKKRKSEAVETSNQDDLLALGTAVGSVLLYSTVRGELHSKL
INGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPIIAAGFCSDKMSLLLVYGNWFQPIIE
RVALNSKEPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QREDVENKRKSGKSEVSIEERLGALDIDPKKGKDSLPQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIRRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKGTACPPQKAKLVYE
EESSEEESDDEIAEKDSDDNWDEDEEEKGSEKDEDVDEENEEEDEDAEEKDEENSEDRDV
ASEKELNGDSDLDPENESEEE
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcggcggtgttgccgaccccctgtcccccgcgggggtaccctgcgcc
ttctctccgcaaaaccaggcctatttcgccttagcttctactgacggtcacctgcgagtg
tgggagacagccaacaaccggctgcaccaagagtatgtgccttccgcgcacctcagcggt
acctgcacctgtctggcctgggcgccagcacggtcgcaggccaaggaaggtccacagagg
aaaaaaagaaaatcagaagctgtagaaacgagtaaccaagatgacttattggcgcttggt
acagcagttggtagtgttttattatacagtacagtaaggggagaattacacagtaaattg
ataaatggtggacatgacaacaaagtcaattgcatacagtggcatcaggacaatggatgt
ttgtatagttgttcagatgataaacatattgtggagtggaacacacagacatgcaaagta
aagtgcaaatggaaaggtgataatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacacgcgacaccagtttcatcacttatgttcactactatcaga
cctcctaatgagagccaaccgttcgatggaattacaggtctttatttcttatctggagca
gtacacgaccggttacttaatgtctggcaggtccggtcagaaaacaaagaaaagaatgca
gtgatgtcttttacagttacagatgaacctgtctacattgatttgactctgtcagaaaac
aaagaagagcctgtgaagttagctgttgtttgcagagacggtcaagttcatctttttgaa
cacatattaaatgggtactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacccatccctatcatagcagctggtttt
tgctcagacaaaatgtcattgttgcttgtatatggcaattggtttcagcccatcattgag
cgagtggctttaaattccaaagaacctcatatgtgtttagtaagagatatttcaaactgc
tgggccccaaaagtagaaacagccataacaaaggtgagaacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcatgcagctatcaagcctgctcctcca
cagagggaggatgtagagaacaagagaaagtcggggaaaagtgaggttagcattgaagag
cgcctgggagcactggacatagacccaaaaaaaggaaaggacagccttccacagacaaat
agttttccagttctcctcacacagggcttagaaagtaatgatttcgaaatgttaaataaa
gtacttcagacccggaatttaaacttgataaggagaacggtattaaggatgcccctgcat
gctgttattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
gttttaatggttcagtggctaaaatgcgtgttaacggttcatgcatcctacttatccaca
ttgcctgacctggtaccccagctggggacgctataccagttaatggaaagcagagtaaaa
actttccagaaactctcccaccttcatggaaagcttattcttctagtcacacaagttaca
gcgtcagagaaaacaaagggaacagcttgtcccccgcagaaggcaaagttggtgtatgaa
gaagaatcttctgaagaggagtcagatgatgaaattgccgaaaaggattctgatgataat
tgggacgaagatgaggaagagaaaggaagtgaaaaagatgaggatgttgatgaagagaat
gaagaggaagatgaggatgctgaagaaaaagatgaagaaaatagtgaggacagagacgtc
gcaagcgaaaaggaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaa
gaatga

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