Sus scrofa (pig): 100519832
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Entry
100519832 CDS
T01009
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100519832 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100519832 (WDR43)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100519832 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_ACSF4
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_like
UTP15_C
DUF6235
Nop14
Tricorn_2nd
Zip
Raftlin
Motif
Other DBs
NCBI-GeneID:
100519832
NCBI-ProteinID:
XP_020943331
Ensembl:
ENSSSCG00000008536
UniProt:
I3LH57
A0A8D0MY85
LinkDB
All DBs
Position
3:complement(110317549..110365108)
Genome browser
AA seq
681 aa
AA seq
DB search
MAAGGGGVADPLSPAGVPCAFSPQNQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARSQAKEGPQRKKRKSEAVETSNQDDLLALGTAVGSVLLYSTVRGELHSKL
INGGHDNKVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLMFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPIIAAGFCSDKMSLLLVYGNWFQPIIE
RVALNSKEPHMCLVRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QREDVENKRKSGKSEVSIEERLGALDIDPKKGKDSLPQTNSFPVLLTQGLESNDFEMLNK
VLQTRNLNLIRRTVLRMPLHAVIPLLQELTKRLQGHPNSAVLMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLVTQVTASEKTKGTACPPQKAKLVYE
EESSEEESDDEIAEKDSDDNWDEDEEEKGSEKDEDVDEENEEEDEDAEEKDEENSEDRDV
ASEKELNGDSDLDPENESEEE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggcggcggtgttgccgaccccctgtcccccgcgggggtaccctgcgcc
ttctctccgcaaaaccaggcctatttcgccttagcttctactgacggtcacctgcgagtg
tgggagacagccaacaaccggctgcaccaagagtatgtgccttccgcgcacctcagcggt
acctgcacctgtctggcctgggcgccagcacggtcgcaggccaaggaaggtccacagagg
aaaaaaagaaaatcagaagctgtagaaacgagtaaccaagatgacttattggcgcttggt
acagcagttggtagtgttttattatacagtacagtaaggggagaattacacagtaaattg
ataaatggtggacatgacaacaaagtcaattgcatacagtggcatcaggacaatggatgt
ttgtatagttgttcagatgataaacatattgtggagtggaacacacagacatgcaaagta
aagtgcaaatggaaaggtgataatagcagcgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacacgcgacaccagtttcatcacttatgttcactactatcaga
cctcctaatgagagccaaccgttcgatggaattacaggtctttatttcttatctggagca
gtacacgaccggttacttaatgtctggcaggtccggtcagaaaacaaagaaaagaatgca
gtgatgtcttttacagttacagatgaacctgtctacattgatttgactctgtcagaaaac
aaagaagagcctgtgaagttagctgttgtttgcagagacggtcaagttcatctttttgaa
cacatattaaatgggtactgcaaaaagcctttgacttcaaactgcacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacccatccctatcatagcagctggtttt
tgctcagacaaaatgtcattgttgcttgtatatggcaattggtttcagcccatcattgag
cgagtggctttaaattccaaagaacctcatatgtgtttagtaagagatatttcaaactgc
tgggccccaaaagtagaaacagccataacaaaggtgagaacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcatgcagctatcaagcctgctcctcca
cagagggaggatgtagagaacaagagaaagtcggggaaaagtgaggttagcattgaagag
cgcctgggagcactggacatagacccaaaaaaaggaaaggacagccttccacagacaaat
agttttccagttctcctcacacagggcttagaaagtaatgatttcgaaatgttaaataaa
gtacttcagacccggaatttaaacttgataaggagaacggtattaaggatgcccctgcat
gctgttattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
gttttaatggttcagtggctaaaatgcgtgttaacggttcatgcatcctacttatccaca
ttgcctgacctggtaccccagctggggacgctataccagttaatggaaagcagagtaaaa
actttccagaaactctcccaccttcatggaaagcttattcttctagtcacacaagttaca
gcgtcagagaaaacaaagggaacagcttgtcccccgcagaaggcaaagttggtgtatgaa
gaagaatcttctgaagaggagtcagatgatgaaattgccgaaaaggattctgatgataat
tgggacgaagatgaggaagagaaaggaagtgaaaaagatgaggatgttgatgaagagaat
gaagaggaagatgaggatgctgaagaaaaagatgaagaaaatagtgaggacagagacgtc
gcaagcgaaaaggaattaaatggagattctgatttagatcctgaaaatgaaagtgaagaa
gaatga
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