Sus scrofa (pig): 100519838
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Entry
100519838 CDS
T01009
Symbol
PWP1
Name
(RefSeq) LOW QUALITY PROTEIN: periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssc03009
]
100519838 (PWP1)
Ribosome biogenesis [BR:
ssc03009
]
Eukaryotic type
90S particles
Other 90S particles
100519838 (PWP1)
Pre-60S particles
Other pre-60S particles
100519838 (PWP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WDR54
Beta-prop_SPT8
PALB2_WD40
MS_C
Motif
Other DBs
NCBI-GeneID:
100519838
NCBI-ProteinID:
XP_003126124
Ensembl:
ENSSSCG00000000161
UniProt:
A0A8D1YBM1
LinkDB
All DBs
Position
5:complement(12703067..12730884)
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AA seq
500 aa
AA seq
DB search
MNRSRQVTCVAWVRCGVAKETPDKVELSKEEVKRLIAEAKEKLQEEGGSDEEETGDPSED
GMQSARTQARPREPLEDGDPEDDRTLDDDELAEYDLDKYDEEGDPDTETLGESLLGLTVY
GSNDQDPYVTLKDTEQYEREDFLIKPSDNLIVCGRAEQDQCNLEVHVYNQEEDSFYVHHD
ILLXAYPLSVEWLNFDPSPDDSTGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKK
KKKKGKKDASADGHTDAILDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDK
VQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFSGQIERVTWNHFSPCHFLAS
TDDGFVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPS
LVHSRDMKMGVLFCSSCCPDLPFIYAFGGQKEGLRVWDISTVASVNEAFGRRERLVLGNT
RNSSISGPFGNRSSETPMES
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagccgccaggtgacgtgcgtggcctgggtccgctgcggcgtggccaaagag
acgccagacaaggtagagcttagtaaagaagaagtgaaacgtctcattgctgaagcaaag
gaaaaattacaagaggaaggcggcagtgatgaggaggagacaggcgatccttcagaggat
ggcatgcagagcgctcgtacccaggcccgaccacgggagcccctggaggatggtgaccca
gaggatgacaggacgctggatgatgatgagctggccgagtacgacctagataaatatgat
gaggaaggcgacccagacactgaaactctcggtgaatctctcttgggtcttacagtctac
gggagtaatgaccaagatccttacgttactctgaaagatacggaacagtacgaacgtgaa
gatttcttgattaagccaagtgacaatctcatagtttgtggcagagctgaacaggaccag
tgcaatttagaggtgcatgtttataatcaggaggaagattctttttacgtacaccatgat
atcctgttgntcgcgtaccctttgagtgtggaatggctgaattttgatcccagcccagat
gattcaactggaaattacattgctgtgggaaacatgacccctgtcattgaagtgtgggac
cttgatatagtggactctttagagccagtcttcaccctcggaagtaagctgtcgaaaaag
aagaaaaagaaaggaaagaaggatgcctcagcggacggtcacaccgatgctatccttgac
ctctcttggaataagctggtcagaaatgtgctggcaagtgcatcagctgataacaccgta
atcctgtgggatatgtctctggggaagccagcggcaagccttgccgtacacacggacaag
gtccagactctccagtttcacccatttgaagcacagactctgatttctggatcatatgac
aagtcagtggctttgtatgactgccgaagtccagatgaaagccatcgaatgtggcgattc
agtgggcagattgagagagtgacttggaatcacttttccccttgtcattttttggccagt
acagatgacggctttgtgtataacttggatgcacgttcagacaagccaatttttacactc
aatgcacacaacgatgagatctctggtcttgatctaagcagtcaaatcaagggctgtctt
gtgaccgcatccgcagacaagtacgtgaagatctgggacatattaggagacaggccaagt
ctggttcactctagggacatgaaaatgggagttctcttctgttcttcctgttgccctgat
ttgccatttatttatgcctttggaggtcagaaggaagggcttcgggtctgggatataagc
acagtcgcttcagtaaatgaagcatttggaagacgagagaggcttgttcttggcaataca
agaaattcatctattagtggcccttttgggaacaggagctcagaaacaccaatggagtct
taa
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