Sus scrofa (pig): 100519879
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Entry
100519879 CDS
T01009
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100519879 (LOXHD1)
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100519879 (LOXHD1)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100519879 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Other domain-containing proteins
Others
100519879 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
RR_TM4-6
BUD22
Motif
Other DBs
NCBI-GeneID:
100519879
NCBI-ProteinID:
XP_020948242
Ensembl:
ENSSSCG00000004503
UniProt:
A0A5G2R195
LinkDB
All DBs
Position
1:complement(96080751..96287034)
Genome browser
AA seq
2216 aa
AA seq
DB search
MMPQKKKRRKKDIDFLALYEQELLNYASEDDEEELEHEYYKAKVYEVVTATGDVRGAGTD
ANVFITIFGENGLSPKLHLTSKSKSAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNAS
WYLDRVIVTDMKRPHLRYYFNCNNWLSNVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYT
GDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLMKINVGH
NNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIV
TVFTGDIRGAGTKSKIYLVMYGARGSKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSR
VSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKK
RLKKFPWSLWVWTTDLKKAGTNSLIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIEL
PDLGRFYKIRVWHDKRSPGSGWHLEKMTLMNTLTKDKYNFNCNRWLNANEDDNEIVREMT
AEGPTVRRIMSMARYRVTVCTGELEGAGTDANVYLCLFGDAGDTGERLLYNCRNNTDLFE
KGNADEFTIESVTLRKVRRVRIRHDGKGSGSGWFLERVLVREEGQPESDNVEFPCLRWLD
KDKDDGQLVRELLPSDSNATLKNFRYHISLKTADVPGASTDSRVYIKLYGDKSDTIKQVL
LVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGLHASWFLGSVQIRVPRQGKQ
YTFPANRWLDKDQADGRLEVELYPSEVIDIQKLIHYEVEVWTGDVGGAGTTARVYMQIYG
EEGKTEVLFLSSRSKVFDRASKDIFQLEAADVGPVFKIRLGHTGEGFGPSWFVDTVWLRH
MAVREADLTPEEEARKKKEKDKLRQLLRKERLKAKLQRKKKKKKKGSDEEDERDEDEESS
SEESSSEEEEEETEEEEDEEEFGPGMQEVIEEYKFDAHRWLARGKEDNELVVELVPAGRE
GPEPNIYEVQVITGNVPKAGTDANVFLTIYGEEYGDTGERPLKKSDKSNKFEQGQTDTFT
VYAIDLGALTKIRIRHDNSGNRPGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSR
ELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANV
FITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGW
FVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTS
DVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEK
IRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDI
FTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERY
LGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDE
FLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTG
PMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSC
GSVEEFYVAGLDVGVIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKK
KARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGD
WLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSG
TLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSR
DETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLI
LEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKREL
VWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYE
VIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELR
KVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV
NT seq
6651 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcagaagaaaaagaggaggaagaaagacattgacttcctagccctgtatgag
caggagctgctgaactacgcctcagaggacgatgaggaggagctggagcacgagtactac
aaggccaaagtgtacgaagtggtcacagccacaggggatgtgcgtggggcagggacagat
gccaatgtcttcatcaccatttttggagaaaatgggctctctcccaagctccatcttacc
agcaagagcaaatctgcctttgaaaaggccaacgtcgatgtgttccgggtaaggaccaac
aatgtgggcctcatctacaaaatcaggatcgagcacgacaacacaggcttgaatgccagc
tggtacctggaccgtgtgattgtgaccgacatgaagcggcctcacctccgttactacttc
aactgcaacaactggctgagtaatgtggagggtgaccgccagtggtgccgggacctgctg
gccagcttcaaccccatggacatgcccagaggtaacaagtacgaagtcaaggtctacact
ggtgacgtcattggggcagggaccgatgccgatgtcttcatcaacatatttggagagtac
ggagacacgggcgagaggaggctggagaatgaaaaggacaactttgaaaagggagctgaa
gacaagttcatgttggatgcccccgatctggggcagctcatgaagatcaatgttggccac
aacaacaagggagggtctgcaggctggttcctgtccaagattgtcattgaagatattggg
aacaaaagaaagtatgatttccctcttaaccgctggctggccttggacgaagacgatggc
aaaatccaaagggatatcttagtgggcggagctgagaccacagctatttcctatattgtc
actgtcttcactggggatattcggggggctgggaccaaatccaaaatctacttggtcatg
tacggggccagaggaagtaagaacagcgggaaaatcttcctggagggcggtgtgtttgac
cgtgggcgcacagacatcttccacatcgagctggccgtcctcctcagccccctgagccgg
gtctccatcggacatggcaatgtgggcgtcaacagaggctggtactgcgagaaggtggtg
attctgtgccctttcactggcatccagcagaccttcccttgcagcaattggctggatgag
aagaaggcggatgggctcatcgagaggcagctctatgagatggtgtctctcaggaagaag
aggctgaaaaaattcccatggtccttgtgggtctggacgacggacctgaagaaagctggt
accaactctcttatcttcatccagatttatgggcagaaggggcggacagatgaaattctc
ctgaatcccaacaacaagtggttcaaacctggcataattgaaaaatttaggattgaactc
ccagacctcggcaggttttataagattcgagtatggcatgataaaaggagtcctggttct
ggatggcatttagaaaagatgaccctgatgaacactctgaccaaggacaagtataacttc
aattgcaatcgctggctcaatgccaatgaggatgacaatgagattgttagggaaatgacc
gctgagggcccgacagtacggaggataatgagcatggcccggtaccgcgtgactgtgtgc
acaggggaacttgaaggtgcaggaactgatgccaacgtctatctctgcctttttggtgat
gcgggggacacgggggagcggctgctctacaactgcaggaataacaccgacctgtttgag
aagggcaatgccgatgagttcaccattgagtctgtcaccttgcggaaggtgaggcgggtg
aggatcagacacgatggcaaaggcagcggcagcggctggttcctggagcgggtgctggtg
agagaggaggggcagcctgagagtgacaacgtggagttcccgtgtctcaggtggctggac
aaggataaagatgatgggcagttggtccgagagttgttgcccagcgacagcaacgcaacc
ctgaagaacttccgctatcacatcagcttgaagacggcggacgtccctggggccagcaca
gattcccgagtctacatcaagctctatggggacaaatctgacaccatcaagcaagttctt
cttgtctctgacaacaacctgaaagactattttgaacgtggccgggtggacgagttcacc
ctggagaccctgaacatcggaaccatcaaccggttggtgatcgggcacgacagcacaggc
ctgcacgccagctggttcctgggcagcgtccagatccgcgtgcctcgccaaggcaagcag
tacaccttccctgccaaccgctggctggacaaggatcaggcagatgggcgcctggaggtg
gagctctaccccagcgaggtcatagacatccagaaattgatccactacgaagttgaggtt
tggacgggggatgtgggcggtgcaggcaccactgcccgagtctacatgcagatctacggc
gaggaaggcaagacagaagtgctcttcctctccagccgctcgaaagtgtttgatcgggcc
tccaaggacatattccagctggaggcagcagatgtgggcccggtcttcaagatccggctg
ggccataccggcgagggctttgggcccagctggtttgtggacaccgtgtggctgcggcac
atggcagtgcgggaggcagacctgacgcctgaggaggaggcgcggaagaagaaggagaag
gacaagctgcggcagctgctcaggaaggagcgtctgaaggccaagctgcagaggaagaag
aaaaagaagaagaagggcagcgacgaggaggacgagagggacgaggatgaggaatcctca
tcggaagagtcctcgtcggaggaggaggaggaggagactgaggaggaggaggatgaggag
gagttcgggccggggatgcaggaggtgatcgaggagtacaaattcgacgcccaccgctgg
ctggcccggggcaaggaggacaatgaacttgtggtggagctggtgcctgcgggccgagag
ggtccggagcccaacatctacgaggtccaggtgatcacaggcaatgtgcccaaggctggc
actgatgccaatgtcttcctgaccatctatggtgaagaatacggggacacgggcgagcgg
cccctgaagaagtcggacaagtccaacaagtttgaacaggggcagacggacaccttcacc
gtctatgccattgacctgggggccctgaccaagattcggattcgccatgacaactcaggc
aacagaccaggctggttcctggacaggatagacatcacggacatgaacaatgagatcacg
tactacttcccatgtcaacgctggctggcagtggaggaggatgacggccagctgtccagg
gagctgttaccagtggatgagtcctatgtgctgtcaccaagcgaggatgaggagggtggg
ggaggtggtgacaacaaccccctcaacaacctggccctggagcagaaagataaatctaca
acattctcagtgaccataaagactggggacaagaagaatgcgggcactgatgccaatgtc
ttcatcacactctttggcactcaagacgacactggaatgaccctcctgaaatcctccaag
accaatagtgacaagtttgagagggacagcattgaaatcttcacagtggagaccctggac
ctgggagatctgtggaaagtcagaatcggccatgacaacacaggcaagggtccaggctgg
tttgtagactgggtagaggtggacgccccatctcttggaaagtgcatgacgttcccctgc
ggccgctggctggctaagaatgaagatgatggggccatcgtcagggacctcttccacgca
gaacttcagacaagactgtacacaccatttgtcccttatgagatcaccctctatactagc
gatgtctttgccgctggaacagactccaacatcttcatcgtcatctatggctgcgatgct
gtgtgcacccagcagaagtacctgtgcaccaacaagagggagcagaagctgttttttgag
aggaagtccgcctcccgttttatagtggagttagaagatgtaggagaaatcattgaaaaa
attcggattggccatgataatacaggcatgaatcctggttggcactgctcccacgtggac
atccgcaggctccttccagataaagatggcacagagaccttgactttcccttgtgatcga
tggcttgccacatctgaggatgacaagaagaccattcgggagctggtcccttatgacatc
ttcactgagaaatacatgaaagatgggtccttgaggcaagtctacaaggaggtggaggag
cctctggacattgtgctgtactcggtgcagatcttcacaggaaacgttcccggggcaggg
acagacgccaaggtctacatcaccatctatggagacctcggggacactggggagcggtac
cttggcaagtcagagaaccgcaccaacaaatttgagagaggaacggcagataccttcatc
atcgaggctgctgacctgggcgtcatctacaagatcaagcttcgccacgacaacaccaaa
tggtgtgcagactggtatgtagagaaggtagagatctggaatgacaccaatgaggacgaa
ttcctgttcctgtgtggacgctggctgtccttgaagaaggaggatgggcggctggagagg
ctcttttatgagaaggagtacagcggggaccggagcagcaactgcagcagccctgctgac
ttctgggagatcgccctgagctccaagatggcagacatcgacgtcgccatggtgacgggg
cccatggccgactatgttcaggagggcccggttattccctactatgtgtcagtcaccacg
gggaagcacaaggatgcagccactgacagccgagccttcatcttactcatcggggaggat
gacgagcgcagtaaccgcatctggctggactatccccaagggaagaagggcttcagctgt
ggctccgtggaggagttctatgttgcaggcttggatgtgggcgtcatcaagaaaatagag
gtgctctatgaaatgacggtgtggacaggtgacgtggttggtggtggcacagactccaac
atctttatgaccctctatggcatcaacggcagcacagaggaagtgcagctagacaaaaag
aaggccagatttgagcgggaacagaatgacaccttcatcatggagattctggacattgct
ccattcaccaagatgcggatccgaattgatggcctgggcaaccggcccgagtggtttcta
gagaggatcctcctgaagaacatgaacacaggagacctgaccatgttctactacggagac
tggctgtcccagcggaagggcaagaagaccttggtgtgtgagatgtgtgccgtcatcgac
gaggaggagatgatggagtggacttcctacaccgtttcagtgaagaccagtgacatcctg
ggagcgggcaccgatgccaacgtgttcatcatcatctttggagagaatggagacagcggg
acgctggccctgaaacagtcggccaactggaataagttcgaacggaacaacactgacaca
ttcaactttcctgacatgctgagcctgggccacctctgcaagctgagggtctggcatgac
aacaaagggatatttcctggttggcacctgagctatgtcgacgtgaaggacaactcccga
gatgagaccttccacttccaatgtgactgctggctctccaagagtgtgggtgatggacag
acagtccgtgactttgcctgtgccaacaatgagatccatgatgagctggaggagaccacc
tacgagatcgtcatagaaactggcaatggaggtgaaaccagggagaacgtctggctcatc
ctggagggcaggaaaaaccgatccaaggagtttctggtggaaaattcttctagacagcgg
gcctttaggaaggggaccacagacacatttgagtttgacagcatctacctcggggacatt
gcctccctctgcgtgggccacctcgccagggaggaccgattcatccccaagagagagctg
gtctggcatgtcaagaccatcaccatcaccgagatggagtacggcaacgtgtacttcttt
aactgcgactgcctcatccccctcaagaggaagcggaagtacttcaaggttttcgaggtc
accaagacgacagagagctttgccagcaaggtccaaagcctggtaccagtcaagtacgag
gtcattgtgacgacgggctatgagccgggggcgggcaccgacgccaacgtctttgtgacc
atctttggggccaatggtgacacgggcaagcgggagctgaagcagaagatgcgcaaccta
tttgagcggggcagcaccgaccgcttcttcctggagacgctggagctgggcgagctgcgc
aaggtgcggctggagcacgatagcagtggatactgctcgggctggctggtggacaaggtg
gaggtcaccaacaccagcaccggggtggccaccatcttcacctgcggcaggtggctggac
aagaagcgcggcgacgggctcacctggagagacctcttcccttctgtctga
DBGET
integrated database retrieval system
