KEGG   Sus scrofa (pig): 100519930
Entry
100519930         CDS       T01009                                 
Name
(RefSeq) histone H2B subacrosomal variant-like
  KO
K11252  histone H2B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04613  Neutrophil extracellular trap formation
ssc05034  Alcoholism
ssc05203  Viral carcinogenesis
ssc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100519930
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100519930
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100519930
  09165 Substance dependence
   05034 Alcoholism
    100519930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100519930
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100519930
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100519930
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100519930
SSDB
Motif
Pfam: Histone CBFD_NFYB_HMF TFIID_20kDa TauD VCPO_N Ribosomal_L33 AAA_lid_2 Brr6_like_C_C
Other DBs
NCBI-GeneID: 100519930
NCBI-ProteinID: XP_003134084
Ensembl: ENSSSCG00000016977
UniProt: A0A8D0I751 A0A4X1UAI6
LinkDB
Position
16:49000352..49001341
AA seq 122 aa
MARYITKKNRCSRGHRHPNSRKKTCSSTECGRRNYSLYVNRVLKEVVPQSGISSRTLDMM
NTVINDIFERISMEASNLMYFRNRCTLTPEDVQKAVYLLLPRKLAKHAVAFGSDAVHRYV
HS
NT seq 369 nt   +upstreamnt  +downstreamnt
atggccagatacatcaccaaaaagaacaggtgctccagaggacatcgacacccaaactcc
agaaagaagacatgttccagcactgaatgtggccgcagaaattactcactctatgtaaac
agggtcctaaaggaagtggtcccccagagtggcatatcctctcgcaccctggacatgatg
aacaccgtgatcaacgacatctttgagcgcatttccatggaagccagcaacctgatgtat
ttcagaaaccgttgcaccctcacccctgaagatgtccagaaggcagtgtatttgctgttg
cctcggaaactagctaagcatgcagtggcttttggaagtgatgctgtccacagatatgtc
cactcctaa

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