Sus scrofa (pig): 100520011
Help
Entry
100520011 CDS
T01009
Symbol
PKD2L2
Name
(RefSeq) polycystic kidney disease 2-like 2 protein
KO
K04991
polycystin 2L2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100520011 (PKD2L2)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100520011 (PKD2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
DUF4834
Motif
Other DBs
NCBI-GeneID:
100520011
NCBI-ProteinID:
XP_020940493
UniProt:
I3LK18
LinkDB
All DBs
Position
2:139920552..139956509
Genome browser
AA seq
626 aa
AA seq
DB search
MAEASRWHLGGTPKPKLQYRKDVEIRTTLQELLLYLIFLINLCILTFGMVNPHMYYLNKV
MASLFLDTSVPGEERTNFRSIRSITDFWKFMEGPFLEGLYWDSWYNSNDLYDLKNTSRIY
YENILLGVPRVRQLKVRNNTCKVYSSFQSLMNECYDKYTSKNEDLSDFGLKSDSEWKYST
PNRSSPWHWGFVGIYRNGGYIFTLSKSKSETRSKFINLRLNSWITRSTRVIFIDFSLYNA
NVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSNYDYFIASCEITFCIFLIVFTTQE
IQKMREFKSAYFQSIWNWLELLLLVLCFVAIAFNVYCNIQISLLLGQLLKNTEKYSDFYF
LAYWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCMKDIVGFAIMFFIIFFA
YAQLGFLVFGSQVDDFSTFQNSIFAQFRIILGDFNFAGIQQANRILGPIYFITFIFFVFF
VLLNMFLAIINDTYAEVKADYSIGRRPDFELGKMIKKSYNNALEKLKLKKAQKDESKESK
KSEDLAEQARREGFDETEIQSAEKMKKWKERLEKKYYSTEIQDDYQPVTQQEFRDLFLYA
VELEKELHYVSLKLNRVMRKVSALQY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcgtcccggtggcacctaggcggaactccgaaacctaagctgcagtacaga
aaggacgtagaaattagaaccacacttcaggagttgttactctacttaatttttttaata
aacttatgtatattgacttttggaatggtaaacccacatatgtattacttaaacaaggtt
atggcatctctatttttggacacatctgtgcctggtgaagaaagaaccaactttaggtct
attcgcagtataactgacttttggaagtttatggaaggaccgtttctggaaggtctgtac
tgggactcatggtacaatagcaacgatttgtatgatttaaagaacaccagtcgcatctac
tatgagaacatacttttaggagtccccagagtccgtcaactgaaagtccgaaacaacaca
tgcaaggtctattcatcctttcagtccttgatgaatgaatgttatgacaaatatacttct
aaaaatgaagatctgtctgattttggccttaaatctgactctgaatggaagtattccact
cctaataggagctccccttggcactggggatttgttggtatataccgaaatgggggatat
attttcactttatcaaaatcaaaatctgaaacccgaagcaagttcattaaccttcgactg
aacagctggatcacaagaagcactagagttatttttattgatttttcattatacaatgct
aatgtaaatctgttttgcattatcagattggtggcagagttccctgcaactggaggaata
cttacttcatggcagttttattctgtgaagctcctcagatatgttagcaactatgattat
tttattgcttcctgtgaaatcacattttgtatttttcttattgtcttcacaacacaggaa
atccaaaaaatgagagaatttaaatctgcctatttccaaagtatttggaattggctagaa
ttactacttttggtgttgtgttttgtggccattgccttcaacgtgtactgtaatatacaa
atttctctcttgcttggacagctgttaaaaaatactgaaaaatattcagacttctatttt
cttgcatactggcacatttattacaacaatataattgccataaccatcttctttgcatgg
ataaagatattcaaattcataagctttaacaagacaatgtctcagctgtcatcgactctg
tcccgctgtatgaaagatatagtaggatttgccatcatgttttttataatattctttgct
tacgcccagttgggatttcttgtttttggatcacaggttgatgacttttccacttttcaa
aattccatatttgcacagtttcgaattattcttggagattttaattttgctggtattcaa
caagccaatcgtatcttgggacccatttacttcatcactttcatctttttcgtgttcttt
gtcctgctgaacatgttcttggcaataattaatgatacctatgctgaagtaaaagctgac
tactcaataggcagaaggccagattttgaacttggtaaaatgattaaaaagagttacaac
aatgccctcgaaaaactcaaactaaagaaagctcaaaaggatgaaagtaaggaaagtaag
aaaagcgaagatttggctgaacaagccagaagagaaggctttgatgaaactgagattcaa
agtgcagagaagatgaaaaaatggaaggagaggcttgagaaaaagtattattctacagaa
attcaagatgattaccagcctgtcactcaacaagaatttcgagacctcttcttatatgct
gtggagctggagaaagaattacactacgttagtttaaaattaaaccgagtgatgagaaag
gtttcagctctacaatattga
DBGET
integrated database retrieval system
