Sus scrofa (pig): 100520035
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Entry
100520035 CDS
T01009
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 precursor
KO
K16498
protocadherin delta 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100520035 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100520035 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
100520035 (PCDH7)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100520035 (PCDH7)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Protocadherins
100520035 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Mid2
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
100520035
NCBI-ProteinID:
NP_001231413
Ensembl:
ENSSSCG00000008765
UniProt:
A0A4X1V9U3
LinkDB
All DBs
Position
8:23459475..23872204
Genome browser
AA seq
1248 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGEGRRAGPADSAPYPGGGGNGASGGGPGGSKRRLDAPEGGGGTNPGG
RSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLIT
DVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLR
LDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRK
IGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGD
QNKKKYFLHTSAPLDYETTREYNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSV
VEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDR
EQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVG
MVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGD
PPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADL
NYSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFV
NESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVV
MARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKP
NGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQ
AVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSL
QSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGKCTRE
CDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNLLNK
KLTSSYETFSAASFSKNEEANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgcctgggctgctgtctcctt
ttgccgctctcgctcagcctggcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcctcagacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
accggcgagcttagtacaagcgagcgacgcattgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgctttctggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggaccttttcgaaggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtctcccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctctacctgctgcccaccgccaccgaccgtgacttcggccgaaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggtggcggcggcggcgaaggccggcgcgccggg
cctgccgacagcgccccctaccccgggggcggcgggaacggcgcgagcggtggcggccct
ggaggctccaagaggcggctggacgcgccagaaggcggcggcgggaccaacccgggcggc
cgcagcagtgtgttcgaactgcaggtggccgacaccccggatggcgaaaagcagccgcag
ctaattgtgaagggggcgctggaccgcgaacagcgcgactcctatgagttgaccctgcgg
gtgcgcgacggcggcgacccgcctcgatcctctcaggccatcctgcgggtgcttatcacc
gacgtgaacgacaacagcccccgctttgagaagagcgtgtatgaggctgacctggcagag
aacagcgccccggggacccccatcctgcagctgcgtgccgccgacttggacgtgggggtc
aacgggcagatagagtacgttttcggggcggctaccgagtctgtgcggcggttactgcgc
ctcgacgagacgtccggctggctcagtgtcctgcaccgtatcgaccgcgaggaggtgaac
cagctgcgcttcaccgtcatggcccgcgatcgtgggcagccccccaagaccgacaaggcc
acggtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgcaag
atcggtcgtatcccactcaaggacggggtggccaatgtggcagaggacgttctagtcgac
actcccattgccctggtgcaggtgtccgaccgagaccaaggcgagaacggagtggtcacc
tgcactgtagtgggcgacgtgcccttccagctcaagccagccagtgacacagagggcgac
cagaacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccacccgg
gagtacaacgtagtcatagtggcggtggactcaggcagccccagcctctccagcaacaac
tccctgattgtcaaggtgggggacaccaatgacaacccgcccgtctttgggcagtcggta
gtggaggtttactttcctgagaacaacatccctggagagagggtagccaccgtgctggcg
acagacgcagacagcgggaaaaacgctgaaatcgcctactcgctggactcttctgtgatg
gggatcttcgccatcgatcccgattcaggggacatcctcgtcaataccgtgctggaccgc
gagcagactgacaggtatgagtttaaagttaacgccaaagacaaaggcatcccagtgcta
cagggcagcaccacagtgattgtgcaggtggctgacaagaatgacaacgatcctaagttt
atgcaggacatctttaccttttacgtgaaagaaaacttgcagcccaacagccccgtggga
atggtcacggtgatggatgctgacaaggggcgcaatgcagagatgagcctgtacatagag
gagaacagtaacattttttccattgaaaatgacacggggaccatttactccacaatgtct
tttgaccgggaacatcagaccacttacacattcagagtcaaggctgtggatggaggagat
cctcccagatctgccacagccacagtctctctctttgtgatggatgagaatgacaatgct
cccacagttacccttcccagaaacatttcctacactttactgccaccttcaagtaatgtc
aggacagtagtagctacggtgttagcaacagacagtgatgatggcatcaatgcagacctg
aactacagcattgtgggaggcaatcccttcaagctgtttgagattgatcccaccagtggt
gtggtttccttagtgggaaaactcacacaaaagcattatggcttgcacaggttggtggtg
caagtgaatgacagtgggcagccttcccagtccaccacaactctggtgcatgtgtttgtc
aatgaaagtgtttccaatgcaacagtgatcgactcccagatagccagaagtttgcacacc
cccctcacccaggatatagctggtgacccaagctatgaaattagcaagcaaagactcagt
attgtcattggggtggttgctggaattatgacagtgattctaatcatcttaattgtagtg
atggccaggtattgccggtccaaaaataaaaatggctatgaagccggcaaaaaagatcat
gaagacttttttacaccccagcaacatgacaaatctaaaaagcctaaaaaggacaagaaa
aacaaaaaatctaagcagcctctctacagcagcattgtcactgtagaagcttctaaacca
aatggacagaggtatgatagcgtcaatgagaagctgtcagacagcccaagcatgggccga
taccgatcagttaacggtgggcctggcagtcctgacctggccaggcattacaaatccagc
tccccattgcctactgtccagcttcacccccaatcgccaacagcaggaaaaaaacaccag
gccgtacaagatctaccaccagctaacacgtttgtgggagcaggagacaacatttcaatt
gggtcagatcactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagcca
tttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactg
cagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatca
gggccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggat
ggcagtgttgattcaagacctcttccagatgtagccctgaccgggaagtgtacccgtgag
tgtgatgagtatggccattcagactcctgctggatgcccgtccgtacttctccagagagg
aagaagagccagcccaaactctccaccttcatgcctgttgatgaacgaggaagccaggaa
aagctggccaacggcgaggctgccatcatgggtgaccgcaacagaaacctcctgaacaaa
aagttgacctcatcctatgagaccttcagtgcagctagtttcagcaaaaatgaggaagcc
aacactgaggatattccccttaccaaaacaggggaatacaagccatctcctgtcaatact
ctcactagaagagaagtttacctgtag
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integrated database retrieval system