KEGG   Sus scrofa (pig): 100520035
Entry
100520035         CDS       T01009                                 
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 precursor
  KO
K16498  protocadherin delta 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    100520035 (PCDH7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssc01009]
    100520035 (PCDH7)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ssc04515]
    100520035 (PCDH7)
Protein phosphatases and associated proteins [BR:ssc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100520035 (PCDH7)
Cell adhesion molecules [BR:ssc04515]
 Cadherins
  Protocadherins
   100520035 (PCDH7)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th TMEM154 Mid2 LYRIC KIAA1549 MLANA EphA2_TM Adeno_E3_CR2 Fibulin_C
Other DBs
NCBI-GeneID: 100520035
NCBI-ProteinID: NP_001231413
Ensembl: ENSSSCG00000008765
UniProt: A0A4X1V9U3
LinkDB
Position
8:23459475..23872204
AA seq 1248 aa
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGEGRRAGPADSAPYPGGGGNGASGGGPGGSKRRLDAPEGGGGTNPGG
RSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLIT
DVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLR
LDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRK
IGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGD
QNKKKYFLHTSAPLDYETTREYNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSV
VEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDR
EQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVG
MVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGD
PPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADL
NYSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFV
NESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVV
MARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKP
NGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQ
AVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSL
QSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGKCTRE
CDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNLLNK
KLTSSYETFSAASFSKNEEANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq 3747 nt   +upstreamnt  +downstreamnt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgcctgggctgctgtctcctt
ttgccgctctcgctcagcctggcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcctcagacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcggagtacctgaagatcgacaacctc
accggcgagcttagtacaagcgagcgacgcattgaccgcgagaagctgccccagtgtcag
atgatcttcgacgagaacgagtgctttctggacttcgaggtgtcggtgatcgggccctcg
cagagctgggtggaccttttcgaaggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtctcccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctctacctgctgcccaccgccaccgaccgtgacttcggccgaaacggcatcgagcgctac
gagctgctccaggagcccgggggcggcggtggcggcggcggcgaaggccggcgcgccggg
cctgccgacagcgccccctaccccgggggcggcgggaacggcgcgagcggtggcggccct
ggaggctccaagaggcggctggacgcgccagaaggcggcggcgggaccaacccgggcggc
cgcagcagtgtgttcgaactgcaggtggccgacaccccggatggcgaaaagcagccgcag
ctaattgtgaagggggcgctggaccgcgaacagcgcgactcctatgagttgaccctgcgg
gtgcgcgacggcggcgacccgcctcgatcctctcaggccatcctgcgggtgcttatcacc
gacgtgaacgacaacagcccccgctttgagaagagcgtgtatgaggctgacctggcagag
aacagcgccccggggacccccatcctgcagctgcgtgccgccgacttggacgtgggggtc
aacgggcagatagagtacgttttcggggcggctaccgagtctgtgcggcggttactgcgc
ctcgacgagacgtccggctggctcagtgtcctgcaccgtatcgaccgcgaggaggtgaac
cagctgcgcttcaccgtcatggcccgcgatcgtgggcagccccccaagaccgacaaggcc
acggtggtccttaatatcaaggacgagaacgacaatgtgccgtccattgaaatccgcaag
atcggtcgtatcccactcaaggacggggtggccaatgtggcagaggacgttctagtcgac
actcccattgccctggtgcaggtgtccgaccgagaccaaggcgagaacggagtggtcacc
tgcactgtagtgggcgacgtgcccttccagctcaagccagccagtgacacagagggcgac
cagaacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccacccgg
gagtacaacgtagtcatagtggcggtggactcaggcagccccagcctctccagcaacaac
tccctgattgtcaaggtgggggacaccaatgacaacccgcccgtctttgggcagtcggta
gtggaggtttactttcctgagaacaacatccctggagagagggtagccaccgtgctggcg
acagacgcagacagcgggaaaaacgctgaaatcgcctactcgctggactcttctgtgatg
gggatcttcgccatcgatcccgattcaggggacatcctcgtcaataccgtgctggaccgc
gagcagactgacaggtatgagtttaaagttaacgccaaagacaaaggcatcccagtgcta
cagggcagcaccacagtgattgtgcaggtggctgacaagaatgacaacgatcctaagttt
atgcaggacatctttaccttttacgtgaaagaaaacttgcagcccaacagccccgtggga
atggtcacggtgatggatgctgacaaggggcgcaatgcagagatgagcctgtacatagag
gagaacagtaacattttttccattgaaaatgacacggggaccatttactccacaatgtct
tttgaccgggaacatcagaccacttacacattcagagtcaaggctgtggatggaggagat
cctcccagatctgccacagccacagtctctctctttgtgatggatgagaatgacaatgct
cccacagttacccttcccagaaacatttcctacactttactgccaccttcaagtaatgtc
aggacagtagtagctacggtgttagcaacagacagtgatgatggcatcaatgcagacctg
aactacagcattgtgggaggcaatcccttcaagctgtttgagattgatcccaccagtggt
gtggtttccttagtgggaaaactcacacaaaagcattatggcttgcacaggttggtggtg
caagtgaatgacagtgggcagccttcccagtccaccacaactctggtgcatgtgtttgtc
aatgaaagtgtttccaatgcaacagtgatcgactcccagatagccagaagtttgcacacc
cccctcacccaggatatagctggtgacccaagctatgaaattagcaagcaaagactcagt
attgtcattggggtggttgctggaattatgacagtgattctaatcatcttaattgtagtg
atggccaggtattgccggtccaaaaataaaaatggctatgaagccggcaaaaaagatcat
gaagacttttttacaccccagcaacatgacaaatctaaaaagcctaaaaaggacaagaaa
aacaaaaaatctaagcagcctctctacagcagcattgtcactgtagaagcttctaaacca
aatggacagaggtatgatagcgtcaatgagaagctgtcagacagcccaagcatgggccga
taccgatcagttaacggtgggcctggcagtcctgacctggccaggcattacaaatccagc
tccccattgcctactgtccagcttcacccccaatcgccaacagcaggaaaaaaacaccag
gccgtacaagatctaccaccagctaacacgtttgtgggagcaggagacaacatttcaatt
gggtcagatcactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagcca
tttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactg
cagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatca
gggccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggat
ggcagtgttgattcaagacctcttccagatgtagccctgaccgggaagtgtacccgtgag
tgtgatgagtatggccattcagactcctgctggatgcccgtccgtacttctccagagagg
aagaagagccagcccaaactctccaccttcatgcctgttgatgaacgaggaagccaggaa
aagctggccaacggcgaggctgccatcatgggtgaccgcaacagaaacctcctgaacaaa
aagttgacctcatcctatgagaccttcagtgcagctagtttcagcaaaaatgaggaagcc
aacactgaggatattccccttaccaaaacaggggaatacaagccatctcctgtcaatact
ctcactagaagagaagtttacctgtag

DBGET integrated database retrieval system