Sus scrofa (pig): 100520216
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Entry
100520216 CDS
T01009
Name
(RefSeq) ATP-binding cassette sub-family A member 9 isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
ssc
Sus scrofa (pig)
Pathway
ssc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100520216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100520216
Transporters [BR:
ssc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100520216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
AAA_22
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
100520216
NCBI-ProteinID:
XP_013836273
Ensembl:
ENSSSCG00000017257
ENSSSCG00000027531
ENSSSCG00000029335
UniProt:
A0A4X1SMY9
LinkDB
All DBs
Position
12:11294729..11359529
Genome browser
AA seq
1623 aa
AA seq
DB search
MSKRHISVGRQTWALLCKNFLKKWRMKRETLLEWFFSFLLALFAFLFSSNLHQVNDFLQL
PAMDLGRVDNFNDSNYIIAFAPESKTIQEIMNKVASAPFMKGRPILGWPDEKSMDELDLN
YSTDAVRVVFTDTFSYHLKFFWGGRIPRMKEHRDHSAHCQIMDEKATCESSVFWEKGFVA
FQAAINAAIIEITTNHSVMEKLMSVTGTNMKILPFVAQAGVTTDFFIFFCIISFSAFIYY
VSINVTQERQHIKALMTMMGLRESAFWLSWGLMYTSFIFIMAVLMAVIIKSAPVVILTGF
MVVFTLFFLYGLSLITLAFLVSVLVKKPFLTGLVVFLLTVLWGSLGFTALYRHLPAFLEW
TLCLLSPFAFTAGMAQLIHLDYDVNANSHLDSSNNQYLIIATLFILVFDILLYLVLTLYL
DKILPTEYGRQHSPWFFLKSFWFQHQSSGHVALENEIDSNCSSNDSFEPVSPEFQGKEAI
RIRNLKKDYVKGKHEKVEALKGLVLDVYEGHITALLGHSGAGKTTLLNILSGLSVPTSGS
VTIYNNKLSAVADLENLSQLTGVCPQVNVQFGFLTVRENLRLFAQIKGIQPQGAEQEVQR
VLRDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGSDPLSRHRVWNLL
KERKSDRVILFSTQFMDEADLLADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLKET
CDPDSITSLVKQHIPEAKLAAQSEEKLVYILPLERTNRFPDLYRDLDRCSNQGIENYGVS
MTTLNEVFLKLEGKSAIDESDIGTWGQLQSDRTKDTGSLVELERVLSSFNEPPKVIGGMA
LWRQQLRAIARVRFLKLKTEKRTLLTILLLFGVSFCPQLLEHLFYELYQKSYSWGLSPNM
YFLSPEEPPRAPLTHLLVINKTGSSIDDFIYSLRQQDIALEVDALGTRNGPNESLYNGAI
TVSGDDKDYRFSVACNTKRLNCFPVLMDIISNGLLRIFNSSEHIQTDRSTYFEEHMSYEY
GYLSNAFFWIPVAACFTPYIALSSIGDYKKKAYSQLRISGLYPSAYWFGQALVDIPLYFL
ILLLMQIMDYIFSPDEIIFIIQNLSVQILCSIGYVSSLVFLTYVISFIFRNGRKNSGIWS
FFFLIITIFSIVAIDLSEYGFLGLFLCTILIPPFTLIGSLFIFSEISPDSMDYLGASEQQ
IVFLALLIPYLHFFIFLFVLRCLEMNFRKKSMRKDPVFRISPRGSSVFPNPEKPDGEDED
VQMERIKTANAVTVPDSDEKPVIIASCLRKEYAGKKRNCFARRKKKVATRNISFCVKKGE
VIGLLGHNGAGKSTTIKMITGDTKPTAGQVLLKGSSGGDPLGFLGYCPQEDALWPSLTVK
EHLEVFAAVKGLRKADAAAAIERLVDALKLQDQLKLPTKALSEGIKRKLCFTLSILGNPS
VVLLDEPSTGMDPEGQQQMWQAIRATFKNTERGALLTTHYMAEAEAVCDRVAIMVSGRLR
CIGSIQHLKSKFGKDYLLEMKVKTLAQVEALHREILRMFPQAARQERFSSLMVYKLPVED
VRPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDGEADLSVKWKLLP
GDP
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggcacatcagtgtgggtcggcaaacgtgggcccttctctgcaagaatttt
cttaagaaatggaggatgaaaagagagaccttgttggaatggtttttctcatttcttcta
gcactgtttgcattcctcttttcctccaatttacaccaagttaatgacttccttcaactg
cctgcgatggatctgggacgtgtagataattttaatgactctaattacattattgccttt
gcacccgaatccaaaaccatccaggagataatgaacaaagtggcttctgcccccttcatg
aaaggaagacctatcctggggtggcctgatgaaaagagcatggatgaactggatttaaac
tactctacggatgcagtgagagtcgtctttacagatactttctcctatcatttgaaattc
ttctggggcggcagaatccccaggatgaaggaacacagagatcactcagctcattgtcaa
ataatggatgaaaaagccacatgtgaaagttcagtgttctgggagaaaggcttcgtagct
tttcaagctgctattaatgctgctatcatagaaatcacaacaaatcattcagtgatggaa
aaactgatgtcagttactggtacaaatatgaagatattaccttttgtggcccaagcagga
gttacaactgattttttcattttcttctgcattatttctttttctgcatttatatactac
gtatcaatcaatgtcacacaagaaagacagcacattaaggcactgatgacaatgatggga
cttcgagaatcagcattctggctctcctggggtttgatgtacaccagcttcatctttatt
atggcagttttgatggctgtcatcataaaatcggcccccgttgtcatcctgactggcttc
atggtcgttttcaccctttttttcctctatggcctgtctttgataactttggctttcctg
gtgagcgtgttggtgaagaaacctttcctcactggactggtcgtctttctcctcactgtc
ttgtggggaagtctgggattcacagctttgtacagacatctgcctgcatttttggagtgg
accttgtgtcttcttagcccctttgctttcactgctggaatggcccagcttatacatttg
gactatgacgtgaatgctaacagccatttggattcttcaaacaaccagtacctaataata
gctactcttttcatattggtttttgatattcttctgtatttggtattgacattatatttg
gacaaaattttgcccactgaatatggacgtcaacattctccctggtttttcctgaaatcg
ttttggtttcaacaccaaagctctggtcatgtggcccttgagaatgaaatagactcaaat
tgttcgtctaacgactcttttgaaccggtgtctccagaattccaaggaaaagaagccatc
agaataagaaatcttaaaaaagactatgtaaaaggaaagcatgaaaaagtagaagctttg
aaaggtctggtactagacgtatatgaaggccacatcactgccctccttggtcacagtgga
gctggaaaaacaaccctgttaaatatactcagtggactctcggtcccaacatcaggttca
gtcaccatctacaataacaaactgtcagcagtggcggacctagaaaatctcagccagctc
actggagtttgtccgcaagtcaatgtgcagtttggcttcctcaccgtgagagaaaacctc
cggctcttcgctcaaataaaagggattcagccacagggagccgagcaagaggtccaacga
gtcttacgggacttagagatggaaaatattcaagacattcttgctcaaaatttaagtggc
ggacaaaaaaggaaactaactttggggattgccattttaggagatcctcaggttttgtta
ctggatgagcccaccgctgggtcagatcctctttcaaggcaccgtgtgtggaacctcctg
aaagagaggaaatcagacagagtaattctcttcagtactcagttcatggatgaggctgac
ctcctggctgataggaaggtgtttatatccaacggaaggctgaggtgtgcgggctcttcg
ctgttcctcaagaagaaatggggcattggctaccacttaagtttgcatctgaaggaaaca
tgtgatccagacagtataacatcgcttgtcaaacagcacatccctgaggccaaattagca
gcacaaagtgaagaaaagctggtgtatattttgcctttggaaaggacaaacagatttcca
gacctctacagggatcttgatagatgttctaatcagggcattgagaattatggtgtttcc
atgacaacattgaatgaggtgttcttgaaattagaaggaaaatcagctattgatgaatca
gatattggcacttggggacaattacaaagcgacaggacaaaagacacaggaagtcttgtc
gagctggagcgagttttgtcttcttttaatgagccaccgaaagtgatcggtggcatggct
ctctggaggcagcagctccgcgcaatagcaagagttcgcttcctgaagttaaagactgaa
aaaagaacgctgttgaccatattattgctttttggggttagcttttgccctcagcttttg
gaacatctattctatgagttatatcagaaaagttattcttggggactgtctcctaatatg
tacttcctctcaccggaagagccacctcgagcacctctgacccacctactggtcatcaat
aagacagggtcaagcattgatgacttcatctactcactgaggcaacaggacatagctttg
gaagtggatgcccttggaacaagaaatggcccaaacgagtctttgtacaatggtgctatc
actgtgtccggtgatgacaaggattacagattttcagttgcatgtaataccaaaagactg
aattgctttcctgtcctcatggatatcattagcaatgggctacttagaatttttaattct
tcagaacacattcagaccgacagaagcacgtattttgaagagcacatgtcttacgagtac
gggtacctgagcaacgccttcttctggatcccggtggcagcctgttttactccttacatt
gccctgagcagcatcggagactacaaaaaaaaagcttactcccagctacggatttcaggc
ctctatccttccgcttactggtttggacaggcgctggtggacatcccactgtacttcctg
atcctgcttctaatgcaaataatggattacatttttagcccagatgagattatatttata
attcaaaacttgtcagttcagatcctgtgtagtattggatatgtctcctctcttgttttc
ttgacatacgtgatttcattcattttccgcaacgggagaaaaaacagtggcatttggtca
tttttcttcttaattatcaccatcttctccatagttgccatcgatctcagcgagtacgga
tttctagggctatttctctgcaccatattaataccacccttcaccctgattggctctcta
ttcattttctccgagatttcccctgactcgatggattatttgggagcttcagaacagcaa
attgtatttctggcattgctaataccttaccttcattttttcattttcctctttgttcta
cgatgtctggaaatgaactttaggaagaagtcaatgagaaaggatcccgtgttcagaatt
tcaccaagaggcagcagtgtttttccaaacccagaaaaacccgacggagaggatgaagat
gtccagatggaaagaataaaaacagcaaatgctgtgacagtcccagattctgatgagaaa
ccagttattatcgccagctgtctacggaaggaatatgcaggcaaaaagagaaactgcttt
gccaggaggaagaagaaagtagccacaagaaatatctctttctgtgttaaaaaaggtgaa
gtcatagggctcttaggacacaatggagcaggtaaaagtacaactattaagatgataact
ggagacacaaagccaactgcggggcaggtgctcctgaaagggagcagcggaggggacccc
ctgggcttcctggggtactgtccccaggaggacgcgctgtggcccagcctgacggtgaag
gagcatctggaggtgttcgccgccgtgaaggggctgaggaaagcggacgccgccgcggcc
atcgagcggttggtggatgcactcaagctgcaggaccagctgaagctccccacaaaggcc
ttgtccgagggaataaagaggaagctgtgcttcacgctgagcatcctgggaaacccgtcg
gtggtgcttctggacgagccgtccacggggatggaccctgaggggcagcagcagatgtgg
caggcgatccgggccaccttcaaaaacacggagaggggcgccctcctgaccacgcactac
atggccgaggccgaggccgtgtgtgaccgcgtggccatcatggtgtccggaaggctgagg
tgtatcggttccatccaacatctgaagagcaaatttggcaaagattacctgctggagatg
aaggtgaagaccctggcccaagtggaggctctccaccgcgaaattctgcggatgttcccc
caggcggctcggcaggaaaggttctcctccctgatggtctacaagttgccagttgaggat
gtgcgacctttatcacaggctttcttcaaattagagacagttaagcagagcttcgacctg
gaggagtacagcctctcgcagtccaccctggagcaggtttttttggagctctccaaggag
caggagctggatgattttgatggggaagctgatctctcagtgaagtggaagctcctgcct
ggagacccttag
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integrated database retrieval system
