Sus scrofa (pig): 100520288
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Entry
100520288 CDS
T01009
Symbol
CHSY1
Name
(RefSeq) chondroitin sulfate synthase 1 precursor
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssc01100
Metabolic pathways
Module
ssc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100520288 (CHSY1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100520288 (CHSY1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100520288 (CHSY1)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100520288 (CHSY1)
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
O-Glycan
100520288 (CHSY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
DUF7164
Motif
Other DBs
NCBI-GeneID:
100520288
NCBI-ProteinID:
NP_001231371
UniProt:
A0A4X1UHC3
A0A287AWP7
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All DBs
Position
1:complement(139730703..139804458)
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AA seq
803 aa
AA seq
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MAARGRRAWLSVLLGLVLGFVLASRLVLPRASELKRAGPRRRASPEGCRPGQAAAASQAG
GARGDERGAQLWPHGPAADGGQRDRNFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVEF
FSSEGSDTSIPIPIVPLRGVDDSYPPQKKSFMMLKYMHDHYLDKYEWFMRADDDVYIKGD
RLENFLRSLNSSEPLFLGQTGLGTTEEMGKLALEPGENFCMGGPGVIMSREVLRRMVPHI
GKCLREMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEQNKKGYIRDLHNSKIHR
AITLHPNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVLMSKYSNTEIHKEDLQLGIA
PSFMRFQPRQREEILEWEFLTGKYLYSAADGQPPRRGMDSAQREALDDIVMQVMEMINAN
AKTRGRIIDFKEIQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSK
IQFVEHEGLDAKELADRINQESGSLSFLSNSLKKLVPFQLPGSKNEHKEPKEKKINILIP
LSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADM
QILPVSGEFSRALALEVGSSQFHNESLLFFCDVDLVFTAEFLQRCRANTVLGQQIYFPII
FSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGGFDVSIQGWGLE
DVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPRQYKMCLGSKASTYGSTQQLAE
MWLEKNDPNYRRSSNNNGSVRTA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcggccggcgcgcctggctcagcgtgctgctcgggctcgtgctgggcttc
gtgctggcctcgcggctagtcctgccccgcgcctctgagctgaagcgagcgggcccgcgg
cgccgagccagtcccgagggctgccggcccggccaagcggccgcggcttcccaggccggt
ggggcgcgaggcgatgagcggggggcgcagctctggccgcacggcccggcagcggatggc
ggccagcgcgacaggaactttctcttcgtgggagtcatgaccgcccagaaatacctgcag
acccgcgcggtggctgcctacagaacatggtccaagacaattcctgggaaagtcgaattc
ttctctagtgagggttcagacacgtcgatccctattccgatagtgccactccggggtgtg
gacgactcctacccgccccagaagaagtctttcatgatgctcaagtacatgcatgaccac
tacttggacaagtatgaatggtttatgagagcagacgacgacgtttacatcaaaggagac
cgtctggagaatttcctgaggagtttgaatagcagtgaacccctctttctcgggcagacg
ggcctgggcaccacagaagaaatggggaaactggctctggagcctggggagaacttctgc
atggggggccccggtgtgatcatgagccgagaggttctccggagaatggtgccacacatc
ggcaagtgcctccgggagatgtacaccactcacgaggacgtcgaggtggggagatgcgtg
cgaaggtttgccggggtgcagtgcgtctggtcttacgagatgcagcagctcttttatgag
aattacgagcagaacaagaaggggtacatcagagatctccataacagcaaaattcaccgt
gccatcacactgcaccccaacaagaacccaccctaccagtacaggctccacagctacatg
ctcagccgcaagatagccgagcttcgccaccgcaccatccagctgcaccgagaaatcgtc
ctgatgagcaagtacagcaacactgagattcataaagaagacctccagctgggaattgcg
ccttccttcatgaggttccagccccgccagcgggaggagattctggagtgggaatttctg
acagggaaatacctgtattcggcagctgacggccaacccccccgaagagggatggactcg
gctcagagggaggccttggatgacattgtcatgcaggtcatggagatgatcaatgccaat
gccaagaccagggggcgcattattgatttcaaggagatacagtacggctatcgccgggtg
aaccccatgtatggggccgagtacatcctggacctcctgcttctgtacaagaagcacaag
ggcaagaagatgacagtgcctgtgcggaggcatgcgtacctgcagcagaccttcagcaag
atccagtttgtggagcatgagggtttggatgcgaaggaactggctgaccggattaaccag
gagtctgggtccttgtcttttctctcgaactccctgaagaagctcgttccctttcagctc
cctgggtccaagaacgagcacaaagaacccaaagagaaaaagataaacatactgatccct
ttgtcaggacgtttcgacatgtttgtgagattcatggggaactttgagaagacgtgtctc
attccgaatcagaatgtcaagctcgtcgtcctgctcttcaattctgactccaaccccgac
aaggccaaacaagtggaactcatgcgagattaccgcatcaagtatcccaaggctgacatg
cagattttgcccgtgtccggggagttctccagagctttggccctggaagtgggatcttcc
caatttcataacgaatctctgctcttcttctgtgatgttgacctcgtgtttactgcagaa
tttctccagcgatgccgagcaaatacagtgctgggccaacagatctattttccaatcatc
tttagccagtatgatccaaagattgtttatagcgggaaggttcccagtgacaaccatttt
gccttcactcagaaaactggcttctggcgaaactatgggttcggcattacttgtatttat
aagggcgatctcgtccgagtaggtggctttgacgtctctatccaaggctggggacttgag
gatgttgacctcttcaacaaggttgtccaggcaggattgaagacgttcaggagccaagaa
gtaggagttgtccatgtccaccatcccgtcttctgtgatcccaatcttgatcccagacag
tataaaatgtgcttggggtccaaagcatcaacctatgggtccacacagcagttggctgaa
atgtggctagaaaaaaatgacccgaattacaggagaagcagcaataataacggctcagtg
aggacagcctaa
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