Sus scrofa (pig): 100520354
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Entry
100520354 CDS
T01009
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100520354 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100520354 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
ssc03016
]
100520354 (ZCCHC7)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
100520354 (ZCCHC7)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
100520354 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
100520354
NCBI-ProteinID:
XP_020921765
UniProt:
A0A8D1HWX3
F1ST82
LinkDB
All DBs
Position
1:237820675..238068505
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AA seq
557 aa
AA seq
DB search
MMFGGFETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLDNVIREEEHEENNSG
NSESFGSKPNQKNLIILSDSEVIQLSDGSEVITLSDEDSIYKCKRKNFRDQAKEKTQGPP
ASLHSNELADQKCKRDVEKPQPGERSGAVQEVMIIEVSSSEEEESTISESDNVESWMLLG
CEVDDKDDDILLNLVGCEKSLNEGVSSHSDLERQTGEDSVNWFISDKDIEAQIGNKRSSG
RWTYRYYSANKNVTCRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLDCSL
PMSSAHRCLERPSWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSTLV
YCYNCGQEGHYGHECTERRMFNQTFPTSPFIYYYDDKYEIRERDQRIKRKVKELQKNGDF
PRQFKRPHMEAADKRSHRGMRKSYASWRSNRWPQEKKETQKETMSRSSREREKHKKADRR
HEVDEDFPRGPRVHSSSGKTQKPHKPFHHTSHYHKPREDKLPKEGKRGKHKKKESCLEDD
SYDNLFFIKQRKKKSKL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggtggttttgaaactatagaagcatatgaagatgacctttatcgtgaagag
tcatctagtgaactaagtgtcgatagtgaggtggaatttcagctctacagtcaagttcat
tatgcccaagatcttgataatgtcatcagggaggaggaacatgaagagaataactctggg
aattctgaatcatttggtagtaaaccaaatcagaagaacttaattatcctttcagatagt
gaggtcatccagctatcagatgggtcagaggtcatcactctgtctgatgaagatagtatt
tataaatgtaaaagaaagaattttagagaccaggcaaaagaaaagacccaaggtcctcct
gcttctcttcattctaatgagctggcagatcagaaatgcaagagggatgttgagaagcct
caacctggagagagatcgggtgcagtccaagaagtcatgattatagaggtcagttcaagt
gaagaggaagagagcaccatttcagaaagtgataacgtggaaagctggatgctgctggga
tgcgaagttgatgataaagatgatgatatccttctcaatcttgtgggatgtgaaaagtct
cttaatgaaggtgtgtcttctcacagtgacttagagagacaaactggagaagatagtgta
aactggttcatcagtgacaaagacattgaggcacagataggtaataaaagatcatctgga
agatggacctaccgatactattcagccaacaaaaatgttacctgcagaaattgcaacaaa
tgtggccatttgtcaaaaaactgtccttttccacaaaaagtccgtccctgctgcctctgc
tccgagagaggacatctccagtatgcctgtccagcccgcttttgcttagactgctctttg
cccatgtcttctgcgcacagatgtctcgaaagaccttcttggagaaaacgttgtgaccga
tgtgatatgataggccactatgctgatgcttgcccagaaatctggaggcagtatcaccta
acgaccaaacctggaccacccaaaaagccaaagaccccttctggacaatcaaccttagtg
tattgctacaactgtgggcaagaaggccattatggacacgaatgtacagaaagacgaatg
tttaaccagacctttccaacgtctccattcatctactactatgatgacaaatatgaaatc
cgggagagagatcagagaataaaacgaaaagtgaaagaactccagaaaaatggggacttt
ccaagacagttcaagaggcctcatatggaagcagcagataagaggtcccaccgtggtatg
aggaagagctatgcctcatggagaagcaacaggtggcctcaagaaaagaaagaaacccaa
aaggaaaccatgagcaggagcagccgagagcgtgagaagcacaagaaggctgacaggcgt
catgaagtggatgaggacttccccaggggccccagagtccactcttcttctggcaaaacc
cagaagcctcacaagccctttcaccacacatctcattaccacaagccaagagaagacaag
ctgcccaaagagggcaagcggggcaagcacaagaaaaaggagagctgcttggaggatgat
agctatgataatttatttttcattaagcagaggaaaaaaaagtctaagctgtga
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