Sus scrofa (pig): 100520373
Help
Entry
100520373 CDS
T01009
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssc03012
]
100520373 (DHX57)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100520373 (DHX57)
Translation factors [BR:
ssc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100520373 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
RWD
HA2_C
zf-CCCH_4
zf-CCCH
HA2_N
Torus
zf_CCCH_4
zf-CCCH_2
AAA_22
nSTAND3
AAA_19
UBA
NB-ARC
AAA_14
NPHP3_N
ResIII
Viral_helicase1
T2SSE
Motif
Other DBs
NCBI-GeneID:
100520373
NCBI-ProteinID:
XP_020943251
Ensembl:
ENSSSCG00000008479
ENSSSCG00000026995
UniProt:
I3LRK0
LinkDB
All DBs
Position
3:101458854..101533160
Genome browser
AA seq
1383 aa
AA seq
DB search
MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGGGSGGGGIGGNRKASSRIWDDGDDF
CIFSESRRSSRPTNSSMRKGEARPKWKPEAKVPLQTLHMTTENQEKVKALLRDLQEQDAD
AGSERGISGEEEDDEPDCDDEQYWSAGREASLVPDADPLECAGSGLVEPPNPEFTVSTFA
VQKLSRYGFHTEHCQAALRICDGDVGASLEHLLTECFSETFGERMKVPEAVSHISLDECV
EQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSKFCKSKRKESTRNIQETSVEIC
KFYLKGNCKFGSKCKFKHEVPPNQIVGRAERNVDDSHLNANEDASFLYELEIRFSKDHKY
PYQAPLVAFYSINENLPLACRLHISEFLYGKALTFAETSEPVVYSLLTLLEEESEIAKLL
TNTHHKYSVPPVNFLPVSSGTRINNPVCRKPVIPSNSFVSSQIPEVEKESEPEEETDEDE
GPAPVMVENESYVNLKKKISKRYDWQAKSVHAENAKICKQFRIKQASRQFQSILQERQSL
PAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVANIVCTQPRRI
SAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDTALQGVTH
IIVDEVHERTEESDFLLLVLKDILLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRT
FPVDQYFLEDAIAVTRYVLQDGSPYARSTKQMSKEKLRARRNRTAFEEVEEDLRLSLHLQ
DQDSVKDALPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHS
YPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPV
GVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGR
AGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRL
IEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPA
LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSTKEGMRASYN
YCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRARDIERRAQGGGDGILEATGEEA
NSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSEELKFVTKNDGYVH
IHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFV
VSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISMIVKLV
TTQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcagtaagaagaaaaggcaagccaggcaaaggaggtggaaaagggtcttcc
agaggaggaagaggaggcagaagtcatgctagtaaatctcacgggggtggcagtggtggc
ggtggcattggtggcaatagaaaggcgtcaagtagaatttgggatgatggcgatgacttt
tgtatcttcagtgaatcaaggcgttcatccagacccactaacagtagcatgagaaaagga
gaggcacgtcccaaatggaagcccgaagccaaagtgccccttcagactctgcatatgact
actgagaatcaagaaaaagtgaaagctcttcttcgagacctgcaagaacaagatgcagat
gctggatctgaaagaggcatttctggggaggaagaagatgatgagcctgattgtgatgat
gagcagtactggtcagctggacgagaagcttcccttgttcccgacgctgatcctttggaa
tgtgctggctcaggcctggtggagcctcctaatccagaatttacagtctcgacatttgca
gtgcaaaagctttccaggtatggtttccacactgaacactgtcaggcagccctaaggatt
tgtgatggagatgtgggggcatcactggagcatctcctcaccgagtgtttttcagagaca
tttggagagaggatgaaggtccctgaggcagtttcgcacataagcttggatgagtgtgtg
gaacagcgacaggaggaggcatttgctctcaagtcaatctgtggagaaaaatttatagaa
agaattcagaaccgagtctggaccattggattagaactggaatatttgacaagtaaattc
tgcaaatccaagcgaaaagaaagtaccagaaatatacaggagacttcggttgaaatctgc
aaattttacctcaaaggaaattgtaaatttgggtcaaagtgcaaattcaaacatgaagtg
cccccaaatcaaattgttggacgagcagaaagaaatgtagatgattctcatcttaatgct
aatgaagatgcatcctttttatatgaacttgaaattcggttttctaaagaccacaaatac
ccctaccaagctccccttgtggcattttattccatcaatgagaatctacctctggcttgt
cgtttacatatttctgagttcctttatggcaaggccttgacatttgcagaaacttcagaa
cctgttgtatattctttgctgacccttttagaggaagaatcagaaatagccaaattgcta
acaaatacccatcataagtacagcgtccctcctgtgaacttcctgccagtgtcctccggg
accagaataaataatcctgtctgccgtaaaccagtgattccaagtaattcttttgtttca
agtcaaattccagaagttgaaaaagaatcagaacctgaggaggagacagatgaggatgaa
ggtcctgcaccagttatggtggagaatgaaagctatgtcaaccttaagaaaaagatttcc
aaaagatatgactggcaggcaaaatcagtacatgccgaaaatgctaaaatctgcaagcag
ttccgaataaaacaggcttccagacagttccagtcaattctgcaggaaagacaatcactc
cctgcttgggaagaaagagaaaacattcttaaattgttgagcaagcaccaagtgcttgtt
gtaagtggtatgactggatgtgggaaaaccacacagattccacagtttattctggatgat
tctctgaatgggccacctgagaaggtggctaacatcgtctgtacccaaccccgacgaatc
tctgccatctctgttgccgaacgtgtggctaaagaaagagcagaaagagtgggtctgaca
gtgggataccagatccggttagaaagtgtcaagtcctcagccaccagattgttatactgc
actacgggagtgctgctaagaagactggagggagacacagctctccaaggagtcacccat
atcattgttgacgaagttcatgagaggacagaagaaagtgacttcttgctgctagttttg
aaagacattttgttgcagagaccaactcttcaagttattctgatgagtgcaactttaaac
gctgagctcttttcagaatattttaattcctgcccagttatcactataccaggtcgtaca
tttcctgttgatcaatattttctggaagatgcaattgctgtgacaaggtacgtgttacag
gatgggagcccgtacgcgcgctccacgaagcagatgtcaaaggaaaagctcagggcgagg
cgcaaccgaaccgcctttgaggaggtggaggaggacctgaggctctccctgcaccttcag
gatcaggactctgtcaaagacgcgctgcctgatcagcagttagattttaagcagctcctg
gcccgctataaaggggtcagcaaatcggtcatcaaaacaatgtccatcatggattttgaa
aaggttaatcttgaattgatcgaggccttattagagtggattgtggacggaaagcactcc
taccctccaggtgctatacttgtatttttaccgggactagcggaaatcaaaatgctttat
gaacagctgcagtctaattctctttttaacaacagacgtagtaatcgatgtgttgttcac
ccacttcattcatctttatccagtgaagagcagcaggctgtgtttgtaaaacctcctgtg
ggtgtaactaagattataatttccaccaacattgctgagacatccataaccatcgatgat
gtcgtctatgtcatcgattctgggaaaatgaaagaaaagagatatgatgccagtaaaggg
atggaaagtttagaggatacttttgtctctcaagccaatgccctgcaaagaaaaggtcgg
gcaggtcgtgtcacgtctggagtatgcttccatttattcaccagccatcacttcaatcac
caacttctaaagcagcagctaccagaaatacaaagagtgccactggaacagctctgtcta
agaattaaaattttagagatgtttagcactcataacctccaatctgtgttctctcggctc
attgaacccccgcaccctgactctctccgtgcctcgaaaatccgattgcgagacttggga
gccttaactccagatgaaaaactgacccctctaggatatcacttggcctctctgcccgta
gatgtgagaatcggcaaactaatgctgtttgggtctatcttccgctgtttggatcctgct
ctcaccattgccgccagtttagcgtttaagtctccttttgtatctccctgggataaaaaa
gaagaagctaaccagaaaaagttagaatttgcatttgcaaacagtgattatctggccctt
ctacgagcatataagggatggcagctgagtacaaaagaaggtatgcgtgcaagttataat
tactgcagacaaaacttcttgtcaggaagagttcttcaggaaatggccagcctcaaacga
caattcactgaactgttatcagatataggctttgtaaaggagggcctcagagcgagggac
attgagagaagggcccaaggaggaggagatggtatcttggaggccacaggcgaagaggca
aactcaaatgctgagaaccccaagttgatatcagcaatgctgtgtgctgcgctgtatcca
aatgtagtgcaggtgaaaagcccagaagggaaatttcagaagaccagtaccggagctgtc
agaatgcaaccaaaatcagaggagttgaagtttgtcaccaagaacgatggatatgtacac
attcacccttcatcagtgaactatcaggtcagacactttgacagcccttacctggtgtac
cacgagaagatcaaaactagtcgggtattcatccgagactgcagcatggtgtctgtgtac
ccgctggtcttgttcggaggaggccaagtgaacgtgcagctccaaaggggagagtttgtc
gtctccttggatgatggctggatccgttttgcagctgcttcccatcaggtggctgaacta
gtaaaggaacttcgttgtgaacttgaccagctcctccaggataagattaaaaacccaagc
atagatctgtgtacctgtcctcgagggtcacggatcatcagcatgattgtgaaacttgtc
accacacaatga
DBGET
integrated database retrieval system
