Sus scrofa (pig): 100520400
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Entry
100520400 CDS
T01009
Symbol
YOD1
Name
(RefSeq) ubiquitin thioesterase OTU1 isoform X2
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100520400 (YOD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100520400 (YOD1)
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C88
100520400 (YOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
OTU1_UBXL
Ubiquitin_2
zf-C2H2_2
Zf-C2H2_ZNF451_5th
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100520400
NCBI-ProteinID:
XP_005667604
Ensembl:
ENSSSCG00000015659
UniProt:
F1RTR7
A0A8D0LEQ2
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All DBs
Position
9:complement(67672640..67681889)
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AA seq
304 aa
AA seq
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MQSLHITYSDLEAFTVEGLSSRTRVRELQGQIAAITGIAPDCQRILVGYPPECLDLSEGD
TILGDLPIQSGDMLIVEEDQTRPKTSPAFTKHGAPSYVREPLPVLTRTTVPADNSCLFTS
VYYVVEGGVLNPACAPEMRRLIAQIVASDPDFYSEAILGKTNQEYCDWIKRDDTWGGAIE
ISILSKFYQCEICVVDTQTVRIDRFGEDAGYTKRVLLIYDGIHYDPLQRVFPDPDTPPLT
IFSSNDDIVLVQALELADEARSKRQFTDVNRFTLRCMVCQKGLTGQAEARDHAKETGHTN
FGEV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtctccatataacttattcagatctagaggcttttacagtggagggattgtcc
agccgtacccgggtgcgggaactccagggccaaattgccgccatcaccgggattgccccc
gattgtcagcgcatccttgtcggatacccacccgagtgcctggatctcagcgaaggggat
accattctgggggacttgcccatccagtcaggcgacatgctgatcgttgaagaagaccaa
accagacccaaaacatcacctgcatttacaaaacatggtgctcctagttacgtcagggaa
cctttgcctgtgcttaccagaacaacggtcccagcagacaactcttgcctctttaccagt
gtgtactatgttgttgaaggaggagtcttgaatccagcttgtgccccggagatgagacgc
ctcatagcacaaatcgtagcaagtgatccagacttctatagtgaggcaatactgggaaaa
acaaatcaagagtactgtgactggatcaaaagggatgatacttggggtggagctattgag
atatccattttgtctaaattttatcaatgcgaaatatgtgtagtggatacacagaccgta
agaattgatcgttttggggaagatgcaggatacaccaaacgggtcctgcttatatatgat
ggcatccactatgatccacttcagcgtgtcttccctgacccagacacccctcctctgacc
attttctcctctaatgatgatattgttcttgtacaagcactggaattagcagatgaagct
agaagcaagagacaatttactgatgtcaaccgcttcaccctgagatgcatggtatgtcag
aagggattaactggacaagcagaagcaagggaccatgccaaggagacaggccataccaac
tttggagaagtgtga
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