Sus scrofa (pig): 100520472
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Entry
100520472 CDS
T01009
Symbol
GABRA5
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04082
Neuroactive ligand signaling
ssc04519
Cadherin signaling
ssc04723
Retrograde endocannabinoid signaling
ssc04727
GABAergic synapse
ssc04742
Taste transduction
ssc05032
Morphine addiction
ssc05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100520472 (GABRA5)
04082 Neuroactive ligand signaling
100520472 (GABRA5)
04519 Cadherin signaling
100520472 (GABRA5)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100520472 (GABRA5)
04723 Retrograde endocannabinoid signaling
100520472 (GABRA5)
09157 Sensory system
04742 Taste transduction
100520472 (GABRA5)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
100520472 (GABRA5)
05033 Nicotine addiction
100520472 (GABRA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssc04040
]
100520472 (GABRA5)
Ion channels [BR:
ssc04040
]
Ligand-gated channels
GABA-A
100520472 (GABRA5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100520472
NCBI-ProteinID:
XP_003121696
Ensembl:
ENSSSCG00000004827
UniProt:
F1SR89
LinkDB
All DBs
Position
1:complement(140486107..140568204)
Genome browser
AA seq
463 aa
AA seq
DB search
MDNGMFSSFIMIKNLLLFCISMNLASHFGFSQMPTSSVKEETNDNITIFTRILDGLLDGY
DNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPL
NNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDF
PMDAHACPLKFGSYAYPNSEVVYVWTNGTTKSVVVAEDGSRLNQYHLMGQTVGTENISTS
TGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTM
TTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAA
KIKKKERELTLNKSTNAYTTGKMTHPPNIPKEQTSAGTSNASSVSVKPSEDKTSENKKTY
NSISKIDKMSRIIFPVLFGTFNLVYWATYLNREPVIKGATSPK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggaatgttctctagctttatcatgatcaaaaatctccttctcttttgtatt
tccatgaacttagccagtcactttggcttttcacaaatgccaaccagttccgtaaaagag
gagaccaatgacaacatcacaatattcaccaggatcttggacgggctcctggatggctat
gacaacaggctgaggccgggactcggagagcgaatcactcaggtgagaacggacatctac
gtcaccagcttcggcccagtgtccgacacggaaatggaatacaccattgatgtgtttttc
cgacaaagctggaaagatgaaaggcttcggtttaaagggcccatgcagcgcctccctctc
aataaccttctcgccagcaaaatctggaccccagacacgttcttccacaatgggaagaag
tccattgcccacaacatgacaacaccaaacaagctgctgcggctggaggacgacggcacg
ctgctctacaccatgcgcttgaccatctctgcagaatgcccaatgcaactggaagacttc
ccaatggatgcccacgcctgccctctgaaatttggcagctacgcataccctaattcagaa
gttgtctacgtctggaccaacggcaccaccaagtcggtggtggtggcagaagacggctcc
aggctaaaccagtaccacctgatggggcagacggtgggcacagagaacatcagcaccagc
acaggtgaatacacgatcatgacggctcatttccatctgaagaggaagatcgggtacttc
gtcatccagacctacctcccctgcataatgaccgtgatcttgtcgcaagtgtccttttgg
ctaaaccgagaatcagtcccagccaggacagtgttcggggtgaccacggtgctgaccatg
acgaccctcagtatcagtgcccggaactctctgcccaaagtggcttatgcgacggccatg
gactggttcatagccgtgtgctatgcttttgtgttctctgcgctgatcgagtttgccaca
gtcaactatttcaccaagagaggctgggcctgggatggaaaaaaagccttggaagcagcc
aagatcaagaaaaaggagcgtgaacttacactaaataagtcaacaaatgcttatactact
gggaagatgacccaccccccaaacatcccaaaggagcagacctccgcaggaacctcaaat
gcatcttcagtctcagtcaaaccttctgaagacaagacttctgaaaataaaaagacttac
aacagcatcagcaagattgacaaaatgtcccgaattatattcccagtcctctttggcact
ttcaaccttgtttactgggcaacatatttgaatagggagccagtgattaaaggggctacc
tctccaaaatga
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