Sus scrofa (pig): 100520490
Help
Entry
100520490 CDS
T01009
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04024
cAMP signaling pathway
ssc04340
Hedgehog signaling pathway
ssc05200
Pathways in cancer
ssc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100520490 (GLI1)
04024 cAMP signaling pathway
100520490 (GLI1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100520490 (GLI1)
09162 Cancer: specific types
05217 Basal cell carcinoma
100520490 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100520490 (GLI1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
100520490 (GLI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
DUF7565
TSTD2_N
IL17
Motif
Other DBs
NCBI-GeneID:
100520490
NCBI-ProteinID:
NP_001243522
Ensembl:
ENSSSCG00000000443
UniProt:
A0A8D0JJA6
LinkDB
All DBs
Position
5:22736325..22747421
Genome browser
AA seq
1106 aa
AA seq
DB search
MFNSMTPPPVSSYGDPCCLRPLPSQGAPSMGTEGLPGVPFCHQATLMSGPHSYGPARETN
SCTEAPLFPPPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPSSLVAFINSRCASPGGS
YGHLSIGTMSPSLGFSPQMNQQKGATPSFGVQPCGPHDPTPGGMMLHPQSRGPLPTCQLK
SELDVLVSKCPEEPLEGDMSSPNSTGTQDPLLGMLDGREDPEREEKPEPDSVYETDCRWD
GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP
HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK
PYVCKLPGCTKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLPRASALSTVEPKRERDG
GPVREESRLTVPEGAMKPQPSPGAQSSCSSDHSPAGSAANTDSGVEMTGNAGGSTEDLSS
LDEGPCIAGTGLSTLRRLENLRLDQLHQFRPVGPRGLKLPSLTHTGTPVSRRLGPPVSLD
RRSSSSSSVSSAYTVSRRSSLASPFPPGSPPENGASSLPGLTPAQHYLLRARYASARGGG
TPPTAAPSLDRMGGLPAPPWRSRAEYPGYNPNVGVTRRASDPARAADRPAPARVQRFKSL
GCVHTSPTVAGGGQNFDPHLPTSVYSPQPPSITENVTMDTRGLREKPEVGTSMMGSGLNP
YMDFPPADTLGYGGPEGAATESYGVRGPGSLPLGPGPPTNYGPNPCPQQVAYPEPTPETW
GEFPSHSGLYPGPKAPAGTYSQCPRLEHYGQVQVKPEQGCPVGSDSTGLAPCLNAHPNEG
PTCPQPLYSHYPQPPPPQYPQSGTYTQPPPDYLPSEPRPGLEFESPTHSTGQLKAQLVCN
YVQSQQELLWEGGGRGDPPVQEPLYQSSKFLGGSQVSPSPARAPVATYGPGFAPNLPSHK
SGSYPTPSPCHENFAVGANKASHRAAALPRLLPPLPTCYGPLKAGGTNPSCGHPEVGRLG
GGPALYPPPEGQVCNPLDSLDLDNTQLDFVAILDEPQGLSPLPSHDQRDSSEHTPPPSGP
PNMAVGNMSVLLGSLPGETQFLNSSA
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgttcaactcgatgaccccaccgccagtcagtagctatggcgatccctgctgtctccgg
cccctccccagtcagggggctcccagcatggggacagaaggactgcctggtgtgcccttc
tgccaccaggccaccctcatgtctggtccccacagttatgggccagctagagagaccaac
agctgcaccgaggccccactgtttcctcctccccggagtgcagtcaagttaaccaagaag
cgggccctctccatctcacctctgtcggacgccagcctggacctacagacagttatccga
acctcccccagctccctcgtggccttcatcaactcacgttgtgcatctccagggggctcc
tatggtcacctctccatcggcaccatgagcccatctttgggattctcacctcagatgaat
cagcaaaaaggggccacgccttccttcggggtccagccctgtggtccccatgaccccacc
ccaggggggatgatgctgcatcctcagtcccggggacccctcccaacttgccagctgaag
tctgagctggatgtgctggtgagcaagtgccccgaggagcccttggaaggtgatatgtcc
agccccaactccacgggcacacaggatcccctgttggggatgctagatgggcgcgaagat
ccagagagagaggagaagcctgaacctgactctgtgtatgagaccgattgccgctgggac
ggctgcagtcaggaatttgactcccaggagcagctggtgcaccacatcaacagcgaacac
atccatggagaacggaaggaattcgtgtgccattgggggggctgctccagggagctgagg
cccttcaaagcccagtacatgctggtggtgcacatgcgcaggcacacgggcgagaagcca
cacaagtgcacgtttgaggggtgccggaaatcatactcacgcctggaaaatctgaagaca
cacctgcggtcacacacgggtgagaagccatacatgtgtgagcatgagggctgcagtaaa
gccttcagcaacgccagtgaccgagccaagcaccagaatcggacccactccaatgagaag
ccgtatgtgtgtaagctccctggctgcaccaaacgctacacagatcccagctcgctccgg
aaacatgtcaagacagtgcacggtcctgatgcccacgtgaccaagcggcaccgaggagat
ggccccctgcctcgggcctcggctctttccacggtggagcctaagagggagcgggatgga
ggccccgtcagggaggagagcagactgactgtgccagagggtgccatgaagccacagccg
agtcctggagcccagtcctcctgcagcagtgaccactccccagcaggcagcgcggccaat
acagacagcggtgtggaaatgactggaaatgcaggaggcagcactgaggacctgtccagc
ttggacgagggaccttgtattgctggcactggtctgtctactcttcgccgccttgagaat
ctcaggctggaccaactacatcagttccggccagtggggccccggggcctcaaactgccc
agcttgacccacactggcactcccgtgtcccgccggctgggccccccagtttctcttgac
cgccgcagcagcagctccagcagtgtcagctcagcctatactgtcagtcgccgctcctcc
ttggcctctcctttcccccctggctccccaccagagaatggggcatcctctctgcctggc
ctcacacctgcccagcactacctgctccgggcaagatatgcttcagccaggggaggtggt
accccacccacagcagcacccagcctggatcggatggggggtctccctgcacctccctgg
agaagccgagccgagtatccaggatacaaccccaacgtaggggtcacccggagggccagt
gacccagcccgggctgctgaccgccctgccccagctagagtccagcggttcaagagcttg
ggttgtgtccacacatcccctacagtggcaggaggaggacagaacttcgatccccatctc
ccaacctctgtctactcaccacagccccccagcatcactgagaatgtcaccatggatacc
agagggctacgggagaagccagaggttgggacctccatgatgggcagtggtctgaaccct
tatatggatttcccacctgctgatactctgggatacgggggacctgagggggcagcaact
gagtcttacggagttagaggcccgggctccctgcctcttgggcctggtccacccaccaac
tatggccccaacccttgccctcagcaggtcgcctatcctgaacccaccccagaaacatgg
ggtgaattcccttcccactctggactgtacccaggccccaaggcgcctgctggaacctac
agccagtgtcctcgtcttgaacactatggacaagtgcaggtgaagccagaacaggggtgt
ccagtgggttctgactccacaggactggcaccctgcctcaatgcccaccccaatgagggg
cctacctgcccacagcctctatactcccactacccccagcctccccctccccagtacccc
cagtcaggcacctatacccagccacctcctgactatcttccttcagagcccaggcccggc
ctggagtttgagtcccctactcattctacaggacagctcaaggctcagcttgtgtgtaat
tatgttcagtctcaacaggaactgctgtgggagggcggtggaaggggagatcccccagtc
caggaacctctctaccagagttccaagtttctggggggttcccaggttagcccgagccct
gccagagccccagtggccacatacggacctggctttgcacctaacctgcccagtcacaag
tcaggctcctatcctaccccttcaccatgccatgaaaattttgcagtcggggcaaacaag
gcttcccacagggcagcagcactaccccgacttctgcccccgctacccacttgctacggg
cccctcaaggcagggggcaccaaccccagctgtggccatcccgaggtgggcaggctggga
gggggccctgccttgtaccctcctccggaagggcaggtgtgtaaccctctggactctctc
gatctcgacaacactcagctggactttgtggctattctggatgagccccaggggctgagt
cctctgccttctcatgatcagagggacagctctgaacacaccccacctccctcggggccc
cccaacatggctgtgggcaacatgagtgtcttattgggatccctacctggggagacacaa
tttctcaattccagtgcctga
DBGET
integrated database retrieval system
