Sus scrofa (pig): 100520655
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Entry
100520655 CDS
T01009
Symbol
TP53BP1
Name
(RefSeq) tumor suppressor p53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100520655 (TP53BP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
BRCT
Tudor_5
RTT107_BRCT_5
DUF4537
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
100520655
NCBI-ProteinID:
XP_020952574
Ensembl:
ENSSSCG00000021981
LinkDB
All DBs
Position
1:127958500..128032370
Genome browser
AA seq
1971 aa
AA seq
DB search
MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEDDSGSHFSMLSRHLPNLQTHKE
NPVLDVVSNTEQTGGEEQGDDNSSFNECLKENKAADSMDSSHLDTCGSISQVIEQLPQPN
RTSSVLEMSVESAPPVGEEKEEEVEEMEKEEKEEDTPDDTTHSVGAEDPASSQLGFGVLE
LSQSQDIEEHTMPYVGNKESLPSVTTNSGYTRLSDVDVNIAIKHEVQSNEDIHMAEQPSK
DISVAAQPSKDISVVEEQNSPPSRSEDIPSSPKVSLAAVETKEQISGQELLEGGMQIHKS
PEPEVLSTQEDLFDQSNKTASGGCCTPSREEGGCSLVSTPATTLHLLHLSGQRSLVQESL
STNSSDLVAPSPDAFRSTPFIVPSSPTEQEGRKDEPVDMSVLSEGGESFQKKLHDDEQVE
TENPPLPPQPTISPQASTPVSQSTPVFTPGSLPIPSQPEFSHDIFLPSPSLEERSNEKKD
RDLHSSSLTVECSKTSETEPKNATEDLGLSLTGDSCKLMLSTSEYSQSPKIESSHRIDED
GENTQIEDTEPMSPVLNSKLVPAENDSVLINPAQDGQVELNQNDDKTKEDNTETREDISI
LAAGCKGREETVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAIEIKEHHPEEGS
SGSEVEEVPETPCESQGEEPKEENMETVPLHLSLTETQSQGLCLPKEAPKQESQEAMEVE
TSVISIDSPQKLPVLDQELEHKDQEAWEEATSEDSSVVIVDVKEPSPRVDVSSEPLEGVE
KCSDSQSWEDDAPEIEPCAENRADIQEEKSEEYGDLKSVTAEKDPVEADSSQPPLTLVRT
DDAPGSDQEMQHTQPQEKTDTSLTEDSKMANAKQLGSGVEAQQPEKASAQTSQSFCESSS
ETPFHFTLPKEGDIIPPLAGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDVMSESM
VETNDPILGNEKGDSGAAPEIDDKLCLRMKLVSPETEASEESLQFSLEKPAIGERKNGST
AVAEAVASPQKTLSVFGCVCEAQQEDEAQNQEPPSAPIRGNLLHFPSTQDKEEKGKLEGD
QRTRQSQQPMKHSSPVKDPASPTSQQMATQEPSSPQGEAMEIDTLESQKEGRNISQEKPS
KALVERPSQNNIGIQTIEHSLWVPETVSAATQTVKNVCEQGTSTADQNSGKQDATVQTER
GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHRHMRTIREVRTLVTRVITDVYYV
DGTEVERKVTEETEDPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSLHRTSSGSL
SAVHSSGSSGRGAGPLKGKTSGTEPADFALPSSRGGLGKLSPRKGVSQTGTPVCEEDGDA
GLGIRQGGKAPVTPRGRGRRGRPPSRTTGTRETAVSGPLGIEDISPSMSPDEKSFTRIVP
RVPDSTRRADTGAGTLRRSDSPEIPFQTAAGPSDGLDASSPGNSFVGLRVVAKWSSNGYF
YSGKITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSAGVVKGH
RKESGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAADISLDN
LVEGKRKRRSNISSPATPPASSSSSTTPTRKITESPRASTGVPSGKRKLITSEEERSPAK
RGRKSATVKPGAVGAGEFVSPCESGDNVGEPSALEEQRGPLPLNKTLFLGYAFLLTMATT
SDKLASRSKLSDGPPGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQ
CLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRVLD
WQPRENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVV
TDPSCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggagcagatggaccctactggaagtcagttggattcagatttctctcagcaa
gacacaccttgcctgataattgaagattctcagcctgaaagccaggttctagaagatgat
tctggttctcacttcagtatgctgtctcgacaccttcccaatctacagacacacaaagag
aaccctgtgttggatgttgtgtccaatactgaacagacaggtggagaagaacaaggagac
gataatagtagtttcaatgaatgtctgaaagaaaacaaagctgcagactccatggattct
tctcatttggacacatgtggttccatcagtcaggtcattgaacagttacctcagccaaat
aggacaagcagtgttttggaaatgtcagtggaatctgctcctcctgtgggtgaagagaaa
gaagaagaggtggaagagatggagaaagaggaaaaggaagaagatactccagatgacacc
acacactccgttggtgctgaagatcctgcctcatcacagttgggctttggggttttggaa
ctctcccagagccaggatattgaagaacatactatgccatatgtaggcaacaaagagtct
ctaccgtccgtaaccaccaactctggttatactaggctctctgatgtggatgttaatatt
gcaattaagcatgaagtacagtctaatgaagatatccacatggcagaacagcctagcaag
gatatctctgtggcagcacagcccagtaaggatatatctgtggtagaagagcaaaattca
ccaccttcaaggtcagaggacatcccttctagtcccaaagtatctcttgctgctgtggaa
acaaaagaacaaatatctggtcaagaacttctggaaggtggaatgcagattcacaagtca
ccagagcctgaggttttgtcaactcaggaagacttgtttgaccagagcaataaaacagct
tctggtggttgctgtactccttcaagggaagaaggtggatgttctttggtttccacacct
gccaccactttgcacctcctgcacctctctggtcagaggtcccttgttcaggaaagtctt
tccacgaattcctcagatcttgttgctccttcccctgatgctttccgatctacccccttt
atcgttcctagcagtcccacagagcaagaagggagaaaagatgagccagtggatatgtca
gtgttatctgaaggaggagagtcttttcagaagaaactccatgacgatgaacaagtagag
acagaaaacccccctctcccacctcagcccaccatatcaccacaagcctcaacaccagtg
tctcagagcacaccagtcttcactcctgggtcacttcctatcccatcccagcctgagttt
tctcatgacattttccttccatctccaagtttggaagaacgatcaaatgagaagaaggat
agagatttgcatagttcatctttgactgttgagtgttctaaaacttcagagactgaacca
aagaatgccactgaagatcttgggctttctttgacaggggattcttgtaaattgatgctt
tctacaagtgagtatagtcagtccccaaagatagagagttctcacaggattgatgaggat
ggagaaaacacacagattgaagatactgagcccatgtctccagttctcaattctaaactt
gttcctgctgaaaatgatagtgttctgattaatccagcacaagatggccaagtagaactg
aatcagaatgatgataaaacaaaggaggataacacagaaaccagagaggacataagtatt
ttagctgctggttgcaaaggcagagaagaaactgtagcagaagacgtttgtatcgatctc
acttgtgattcaggtagtcaggcagttccctctccagctactcgatctgaggcactctct
agtgtgttagatcaggaggaagcaatagaaattaaagaacatcatccagaagaggggtct
tcagggtctgaagtggaagaagtccctgagactccttgtgaaagtcaaggagaggagccc
aaagaagaaaatatggagactgtcccgttgcacctttctctgactgaaactcagtcccaa
gggttgtgtcttccaaaggaagcccccaaacaagaatcccaggaagctatggaagttgaa
accagtgtgattagtattgattccccgcaaaagcttccagtacttgaccaggaattggaa
cataaagatcaggaagcgtgggaagaagctacttcagaggactctagtgttgttattgta
gatgtgaaggaaccatctcccagagttgatgtttcttctgaacctttagagggagtggag
aaatgctcagattcccagtcgtgggaggatgatgctccagaaatagaaccatgtgctgag
aatagagccgatatccaagaagaaaagagtgaagaatatggagatctgaaatcagtaact
gcagaaaaagaccctgtagaggcagactcttcacagcctcccttgactttagtgagaaca
gatgatgctccaggatcggaccaggagatgcagcacactcaaccacaggagaaaacagat
acctcgttaacagaagactcaaaaatggctaatgcaaagcagctgggctcaggtgtagag
gcccagcagccagagaaagcctctgctcagacctcacaaagcttctgtgaaagctctagt
gaaactccatttcattttactttgcctaaagaaggtgatattattccaccattggctggt
gcaactccacctcttattgggcacctaaaattggagcccaagagacacagtactccaatt
ggtattagcaactatccagaaagcaccatagcaaccagtgacgtcatgtctgaaagcatg
gtagagaccaacgatcccatacttgggaatgaaaaaggagattctggggctgccccagaa
atagatgataaattgtgtctgagaatgaaattggtcagtcctgagaccgaggcgagtgaa
gagtctttgcagtttagcctggaaaagcctgcaattggtgaaagaaaaaatggatctact
gctgttgctgaggctgttgccagtccccagaagaccctgtctgtgtttggctgtgtctgt
gaagcccagcaagaggatgaggctcaaaatcaggaacccccttctgcacccatcaggggg
aacttgctccattttccaagtactcaagataaagaggagaaaggaaaattagaaggtgac
caaaggactaggcagagtcaacagcctatgaagcacagtagtcctgtcaaagaccctgct
tctcctacctcccagcagatggccacacaggagccatccagtcctcaaggggaagcaatg
gagatagatacactggaaagccagaaagaagggcggaatattagtcaggaaaaacctagt
aaggcgttggttgaaaggcccagccaaaataacataggaatccagaccatagagcattcc
ctgtgggtcccagaaactgtttcagcagcaactcagactgtgaagaacgtatgtgaacaa
gggaccagtacagcagaccagaactctggaaaacaagatgccacagttcagactgagaga
ggcagtggtgagaagccagtcagtgctcctggggatgatacagagtcgctccatagccag
ggagaggaagaatttgatatgcctcagcccccacatggccatgtcttgcatcgacatatg
agaacaattcgagaggttcgcacacttgtcacacgtgtcatcacagatgtatattatgtg
gatggaacagaagtagaaaggaaagtaactgaggagactgaagacccaatcgtagagtgt
caggagtgtgaaactgaagtttccccttcacaaactgggggctcttcaggtgacctggga
gatatcagttccttctcctccaaggcgtccagcttacaccgcacatcaagtgggagtctc
tcagccgtgcacagcagtggcagctcagggagaggagccggaccactcaaagggaaaacc
agtgggacggaacctgcagattttgccttgcccagctcccgaggaggcctgggaaaactg
agtcctagaaaaggggtcagtcagacagggacgccagtgtgtgaggaggatggtgatgca
ggccttggcatcagacagggagggaaggctccagtcacacctcgtgggcgcgggcgaagg
ggccgcccgccttctcggactactggaaccagggaaacagctgtgtctggccccttgggc
atagaggacatttcacctagcatgtcaccagatgagaaatccttcacccgtattgtgccc
cgagtgccagactccaccagacgagcagacacgggtgctggtactttgcgtcgaagtgac
tctccagagattcctttccagactgctgctggcccttctgatggcttagatgcctcttct
ccagggaacagctttgtagggctccgtgttgtagccaagtggtcgtctaatggctatttt
tactctgggaaaatcacacgagatgtcggagctgggaagtataaattgctctttgatgat
gggtacgagtgtgatgtgttgggcaaagacattctgctgtgtgaccccatcccgctggat
acggaagtgacagccctctcggaggatgagtatttcagtgcaggagtggtgaaagggcat
aggaaggagtctggagagctgtactacagcattgagaaagaaggccaaaggaagtggtat
aaacgaatggctgtcatcttatccttggaacaaggaaacagactgagagagcagtatggc
ctaggcccatatgaggcagtaacgcccctcaccaaggcagcagatatcagcttagacaat
ttagtggaagggaaacggaaacggcgaagtaacatcagctccccagccacccctcctgcc
tccagcagcagcagcacaacccctacccgaaagatcacagaaagtcctcgtgcttccacg
ggcgtaccctccggcaaaagaaaacttatcacttctgaagaggaacgttcccctgccaag
cgaggtcggaaatctgccactgtgaaacctggtgcagtgggggcaggagagtttgtgagc
ccctgcgagagtggagacaacgtgggtgaaccctctgccctggaagagcagagagggcct
ctgcccctcaacaagaccttatttctgggctatgcctttctcctcaccatggccacaaca
agtgacaagttggccagccgctccaaactgtcagatggtcctccaggaagcagcgaggaa
gaggaggaatttttagaaattcctcctttcaacaagcagtacacagagtcccagcttcga
gcaggagctggctatattcttgaagacttcaatgaagcccagtgtaacacagcctaccag
tgtctcctaattgcggatcagcattgtcgaacccggaagtacttcctgtgccttgccagc
gggattccttgtgtgtctcatgtctgggtccatgacagttgccatgccaaccagctccag
aattaccgtaattatctgctgccagctgggtacagccttgaggagcagagagttctagat
tggcaaccccgtgaaaaccctttccagaatctgaaggtactcttggtatcagaccaacag
cagaacttcctggagctctggtctgagattctcatgactggaggggcagcctctgtgaag
cagcaccattcaagtgcccataacaaagatattgctttaggggtatttgacgtggtggtg
acggacccctcgtgcccagcctcggtgctgaagtgtgctgaagcattgcagctgccagtg
gtgtcacaagagtgggtgatccagtgcctcattgttggggagagaattggattcaagcag
catccaaaatataaacatgattatgtttctcactaa
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