Sus scrofa (pig): 100520686 Help Entry 100520686         CDS       T01009                                  Symbol TNR Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism ssc  Sus scrofa (pig) Pathway ssc04151   PI3K-Akt signaling pathway ssc04510   Focal adhesion ssc04512   ECM-receptor interaction ssc04518   Integrin signaling ssc05165   Human papillomavirus infection ssc05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:ssc00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100520686 (TNR)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100520686 (TNR)    04518 Integrin signaling     100520686 (TNR)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100520686 (TNR)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     100520686 (TNR)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100520686 (TNR)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssc00536]     100520686 (TNR) Glycosaminoglycan binding proteins [BR:ssc00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100520686 (TNR) SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Tenascin EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N Fn3_PBP1 Fn3_VIN3 EGF_2 FN3_Tor_3rd Uroplakin_II DUF7949 Lzipper-MIP1 Motif Other DBs NCBI-GeneID:  100520686 NCBI-ProteinID:  XP_013845083 Ensembl:  ENSSSCG00000015508 UniProt:  A0A481CFE3 LinkDB All DBs Position 9:complement(117365930..117790332) Genome browser AA seq 1358 aa AA seqDB search MGADGETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQRQAVEEEGGTTSYNTSGKE QPVVFNHVYNINVPLDSLCSSGLEASAEQEVSTEDEVLAEYTGQTSDHESQVTFTHRINL PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCNSNCCQASAATGQLDYIPHCSGHGN FSFESCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS SRGLCVDGECVCEEAYTGEDCSELRCPGDCSGKGRCANGTCLCQEGYAGEDCSQRRCLNA CSGRGHCQEGLCFCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY IVNVVALKEQARSPPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLRYGL VGGEGGKTTFRLQPPLSQYSVQALRPGSQYQVWVSAVRGTNESESTTTQFTTEIDAPKNL RVGSRTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELMVPKSIGPTTRATLTDLVPGT EYGVGISAVMSSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLTDLQPATEY IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLT ATNITPTEALLHWRAPVGIVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTVT MYAASGPLTSGTISTNFSTLLDAPANLTASEVTRQSALISWQPPRAEIENYVLTYKSTDG SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTERSGVTSTAFSTGGRVFPHPQDCAQ HLMNGDTLSGVYTIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWVEYRAG FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDSRSLYKLRIGAY NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG INWYHWKGHEFSIPFVEMKTRPYNHRPVVGRKRRSLHF NT seq 4077 nt NT seq  +upstreamnt  +downstreamnt atgggggcagacggggaaacagtggtcttgaagaacatgctcattggcgtcaacctgatc cttctgggctccatgctcaagccctcagagtgtcagctggaggtcaccacggaaagggtc cagagacaggcggtggaggaggaaggtggcactaccagctacaacacatctggcaaagag cagccagtggttttcaaccatgtgtacaacatcaacgtgcccctggacagcctctgctcc tcggggctggaggcctcagctgagcaggaggtgagcactgaagacgaggtgctggcggag tacacgggccagacctcagaccacgagagccaggtcaccttcacccataggatcaacctc cctaagaaggcctgcccgtgtgccagctcggcccaggtgctgcaggagctgctgagccga atcgagatgctggagagggaggtgtcggtgctccgggaccagtgcaacagcaactgctgc caagccagtgcagccacaggacaactggactatatcccccactgcagtggccatggcaac ttcagcttcgagtcctgtggctgcatctgcaatgaaggctggtttggcaagaactgctcg gagccctactgccccctgggctgctccagtcggggcgtgtgtgtggacggccagtgcatc tgtgacagcgagtacagtggggacgactgctcggagctccggtgccccacagactgcagc tcccgggggctgtgcgtggatggggagtgtgtctgcgaagaggcctacacaggcgaggac tgcagtgaactgagatgccccggggactgctctgggaaggggagatgtgccaacggtacc tgcctatgccaggagggctacgctggtgaggactgcagccagcggcggtgtctgaatgcc tgcagtgggcgaggacattgccaggaggggctctgcttctgtgaggagggctaccagggc cctgactgctcagcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc accatctcggagctggagccaggtcttacctacaacatcagcgtctacgctgtcattagc aacatcctcagccttcccatcactgccaaggtggccactcatctctccacgcctcaaggg ctgcgattcaagaccatcacagagaccaccgtggaggtgcagtgggaacccttctcattc tcctttgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtaattgcc cagctccccagcgacgtgacatccttcaaccagacgggactaaagcctggggaggaatat atcgtcaatgtggtggctctgaaagagcaagcccggagcccccctacctcggccagcgtc tccactgtcatcgatgggcccacgcagatcctggttcgagatgtctccgacaccgtggcc tttgtggagtggactccgcctcgagccaaagtcgatttcattctcttgagatatggcttg gtgggcggggaaggcgggaagaccacgttccggctgcagcctcccctgagccagtactcg gtgcaggccctgcggcccggctcccaataccaggtgtgggtcagcgcagtccgcgggacc aatgagagcgagtccaccaccacccagtttacaacagagattgatgcccctaagaacctg cgggttggttcccgtacagcaaccagccttgatcttgagtgggacaacagtgaagcagag gttcaggagtacaaggttgtgtatagcaccctggcaggcgagcagtaccatgaactgatg gtccccaagagcatcggtccaaccaccagagccacgctcacagatctggtgcctggcact gagtatggagttggaatatctgccgtcatgagctcacagcaaagtgtaccagccaccatg aatgccaggacggaacttgacagccctcgagacctcatggtaacagcctcctcagaaacc tccatctccctcatctggaccaaggccagtggccccattgaccactacagaatcaccttt accccatcctctgggatcgcctcggaagtcaccgtgcccaaggacaggacctcatataca ctgacagacctagagcccggggcagagtacatcatttcaatcacagcggagaggggtcgg cagcagagcttggagtccactgtggatgccttcacaggcttccgccccatctcccatttg cacttttctcacgtgacctcctccagtgtgaacatcacctggagcgacccatcccctcca gcagacagactcattctgaactacagtccccgggatgaagaggaagagatgatggaggtc tccctggatgccaccaagaggcatgctgtcctgacagacctgcagccagccaccgagtac attgtgaacctggtggccgtccatggcacagtgacttctgagcccatcgtgggctccatc accacaggaatcgatccacccaaagacatcacaattagcaatgtgaccaaggactcagtt atggtctcctggagtcctcctgttgcatcttttgattactatcgagtatcgtatcggcca acacaagtgggacgcctggacagctcagtggtgcccaacacagtgacagaattcaccatc accaagctgtacccagctaccgaatatgaaatcagcctcaacagcgtgcggggcagggag gagagtgagcgcatctgcaccctcgtgcacacagccatggacaatcctgtggatctgacc gctaccaacatcactccaacagaagctctgttgcattggagggcaccagtgggcatagtg gagaactacgttattgttctcactcactttgcagttgctggagagaccatcctggttgat ggagacagtgaggagttccagctcgttgacctgcttcctaggacccactacaccgtcact atgtatgctgccagtgggcctctcaccagtggcactatcagcaccaacttctctactctc ctggacgctcctgcaaatctgacagccagtgaagtcaccagacaaagtgccctgatctcc tggcagcctcccagagcagagattgagaactacgtcttgacctacaaatccaccgatgga agtcgcaaggagctgattgtggatgcggaggacacgtggatacgactggagggcctgtct gagagtacagactacacagtgctcctgcaggcagcccaggacactgagcggagcggtgtc acctccactgccttcagcacagggggccgggtcttccctcatcctcaagactgtgcccag catttgatgaacggagacactctgagtggggtttacaccatcttccttaatggagagcta agccagaagttacaggtgtattgcgacatgaccaccgatgggggtggctggattgtattc cagaggcggcagaatggccaaaccgattttttccggaagtgggttgagtaccgggctggc tttgggaacctggaggatgagttttggttggggctggacaacatacacaggatcacgtct cagggccgctatgagctgcgcgtggacatgcgggatggccaggaggccgccttcgcctac tacgacaagttctctgtggaggacagcagaagcctgtacaaactccgcataggagcctac aacggcaccgcaggggactctcttagctatcatcagggccgccccttctccacagaggac agagacaatgatgttgcagttaccaactgtgccatgtcgtacaagggggcctggtggtat aagaactgccaccggaccaacctcaatggcaaatacggggagtccaggcacagtcagggg atcaactggtaccattggaaaggccacgagttctccatccctttcgtggaaatgaagacg cgcccgtacaaccaccgtcccgtggtggggaggaagcggcggtccctgcacttctaa

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