Sus scrofa (pig): 100520715
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Entry
100520715 CDS
T01009
Symbol
RIN1
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 1
KO
K17638
Ras and Rab interactor 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100520715 (RIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100520715 (RIN1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100520715 (RIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
RA
SH2
Motif
Other DBs
NCBI-GeneID:
100520715
NCBI-ProteinID:
XP_003122546
Ensembl:
ENSSSCG00000012950
LinkDB
All DBs
Position
2:6053875..6061051
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AA seq
784 aa
AA seq
DB search
METTGEPGAGLLGTPNPTSFAPGHLERGKPAQAPLYDVPDAGGAQAGGPQQPGXTVSLRE
RLLLTRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRQCQALCVRLPEASGPSFVSSH
CIQEGPGGISLEGSELVFPDLVQLICAYCHTRDILLLPLQLPRAIHLAATHKELEAISHL
GVEFWSSSLNTKAPPGPAEGPLLPRLKPRSPQELDQGTGAALCFFNPLFPGDLGPTKREK
FKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGAAPHQTERLPPRQLLRRESSVGYRVPGG
AGPSLPPLPSLQEVDCGSPSSSEEEGALGSQGSPATSPCLGRRRPLLRSMSAAFCSLLAP
ERQVGRAAAALMQDRHTAVGQLVQDLLTQVRASPEPQXLQGIREALSRARAMLSAELGPE
KLLPPERLERVLEKSLHRSVLKPLRPILVARLRRRLSTSGSLGRLAEGLRLARTQGPRAF
GSRLSLPSPVEVEQVRQKLLQLLRAYSPSAQVKRLLQACKLLYTALRTQAGEGAGADEFL
PLLSLVLAQCDLPELLLEAEYMSEXLEPALLTGEGGYYLTSLSASLALLSGLDQAHTLPL
SPAQELQRSLSLWEQRCLPATHSFQHLLRVAYQDPSSGCTSKTLAVPPGASIATLNKLCA
TKFRVTQPDTFSLFLYKGQDYHRLPPGALAHRLPTAGYLVYRRAERPETQGASPGAAAEE
GSGXPEAGGREEEKGRDGDTEVEASPRDSGGESETVAEGAGRQAREDPTQPRGREAEGSL
VAEE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacgggggagccaggagcaggccttctgggaacccccaacccgaccagcttt
gcgcctgggcacctggagagaggaaagccggcccaggccccgctgtacgatgtgcctgat
gccggcggggcacaggcaggagggccccagcagccgggcngcaccgtgagcctgcgggag
cgcctgctgctcacccggcccgtgtggctgcaactgcgggccaacgctgcggccgcactg
cacgtgctgaggacggagcccccggggaccttcctggtgcggaaatctaacactcgccag
tgccaagccctgtgcgtgcggctgcctgaagccagtggcccctccttcgtttccagccac
tgcatccaagaaggccctgggggcatctctttggagggctcagagctggtgttcccggac
ctggtccagctcatctgtgcctactgccacacccgggacattcttctcctcccgctccag
ctccccagagccatccacctggcagccacccacaaggaactggaagccatctcccatctg
ggcgtcgagttctggagctcctccctcaacaccaaggctccaccgggcccagccgagggc
ccactgctgccccggctgaagccacggtccccacaagagctggaccagggcaccggagcc
gccttgtgcttcttcaaccccctgttcccaggggacctgggccccaccaagcgggagaaa
ttcaagaggagcttcaaagtgcgtgtgtccacggagacctccagccccctgtctccaccg
gctgtgccgccccccccagtcccggtgctgccaggagcagccccccatcagacagaaagg
ttgccgcctcgccagctgctgcggagggaaagctcagtggggtaccgtgtgccagggggc
gccggccccagcctcccaccactgccctccctccaggaggtagactgcggctcccccagc
agctcagaggaggagggggcactggggtcccaggggagcccagcgacctccccctgccta
ggccgccggcggcctctgcttcgatccatgagcgctgccttctgctccctgctggcaccc
gagcggcaggttggccgggcagctgccgcgctgatgcaggaccgacacacagccgtgggc
cagctggtgcaggacctgctgacccaggtgcgggccagccccgagccccagngactgcag
ggtatccgagaggcgctaagccgggcccgggccatgctgagtgcagagctgggccctgag
aagctgctgccgccagaaagactggaacgtgtcctggagaagtcgctgcatcgctccgtg
ctcaagcctctccggcccatcctggtggctcggttgcggcgccggctttccaccagcggt
tccctgggccgcctggctgaaggcctccgcctggcccggacccagggccccagagccttt
gggtctcgcttaagcctgccctccccggtagaggtggagcaggtgcgccagaagctgctg
cagctgcttcgagcctactcacccagtgcccaggtcaagcggctcctgcaggcctgcaag
ctgctctacacagccctgaggacccaggcgggggagggagctggggctgatgagttcctc
ccactgctaagccttgtcctggcccagtgtgaccttcctgagctgctgctggaggctgag
tacatgtcagagntgctggagcctgccctgctcaccggagagggcggctactacctgacc
agcctctcagccagtctggccctgctgagtggcctggaccaggcccacaccctccccctg
agccccgcgcaggagctgcagcgctccctaagcctctgggagcagcgctgcctgcccgct
acccacagcttccagcacctcctccgagtagcctatcaggaccccagcagtggctgtacc
tccaagaccctggctgtgcccccaggggcctccattgccacgctcaacaaactctgtgcc
accaagttccgagtgacccagcccgacactttcagcctcttcctgtacaaggggcaggac
taccaccgcctgccccccggagccctggcccaccggctgcccacagccggctacctcgtc
taccgccgggcagagcggcctgagacccagggggcctcccctggggctgcagcagaggag
ggcagtgggnggccagaggcagggggcagagaggaagagaaagggcgagacggggacacc
gaggtcgaagccagccctagggacagcgggggagagtctgagacagtggccgagggggcc
gggcgccaggccagggaggaccccactcagccacggggacgagaggctgagggaagcctg
gtagcagaggagtag
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