Sus scrofa (pig): 100520724
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Entry
100520724 CDS
T01009
Symbol
OTP
Name
(RefSeq) homeobox protein orthopedia
KO
K24901
homeobox protein orthopedia
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100520724 (OTP)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100520724 (OTP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100520724
NCBI-ProteinID:
XP_020940133
Ensembl:
ENSSSCG00000014099
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All DBs
Position
2:complement(86529293..86566414)
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AA seq
312 aa
AA seq
DB search
MKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPGEDITTVGSTPASL
AVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELERSFAKTHYPDIFM
REELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLPQFPSAAAAAAA
AMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCSLAAGPPPNSMGLS
NSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRR
KALEHTVSMSFT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgccgccgagcttctgggccaccgggaggcggtgaagtgtaggctgggcgta
gggggctccgatcccgggggccatccgggggacctagcgcccaactcagacccggtggag
ggagccactctgctgcccggggaggacatcaccacagtgggctctacaccggcctcgctg
gcggtgagcgcaaaggatccggacaagcagccagggccccaaggcggcccgaaccccagc
caagccggccagcagcagggccaacagaagcagaagcgccaccggacgcgcttcacgcca
gcgcagctcaacgagttggagaggagcttcgccaagactcactacccagacatcttcatg
cgcgaggagttggcgttgcgtatcgggctgacagagtcccgagtgcaggtctggttccag
aatcggcgcgcgaagtggaagaagcgcaagaagactaccaacgtgttccgcgctcctggc
acgctgctgcccacgccaggccttccacagttcccgtcggccgccgccgccgccgccgcc
gccatgggcgacagcctgtgctctttccacgccaacgacacccgctgggcggcggcagcc
atgccgggcgtgtcgcagctgccgctgccgccggcactgggcaggcagcaagccatggca
cagtcgctgtcccagtgcagcctggcggcggggccgccgcccaactccatgggcctgtcc
aacagcctggcgggctccaacggcgcggggctgcagtcgcacctctaccagcccgccttc
cccggcatggtgcccgcctcccttcccggccccagcaacgtctccggctcgccccagctc
tgcagctccccggacagcagcgacgtgtggcggggcacaagcatcgcctctctccgccgc
aaggcgctagagcacacagtctccatgagcttcacttaa
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