KEGG   Sus scrofa (pig): 100520979
Entry
100520979         CDS       T01009                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssc04121]
    100520979 (HLTF)
   03400 DNA repair and recombination proteins [BR:ssc03400]
    100520979 (HLTF)
Enzymes [BR:ssc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100520979 (HLTF)
Ubiquitin system [BR:ssc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100520979 (HLTF)
DNA repair and recombination proteins [BR:ssc03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    100520979 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 zf-RING_5 ResIII zf-ANAPC11 zf-C3HC4_4 HDA2-3 zf-Nse zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 100520979
NCBI-ProteinID: XP_003358653
Ensembl: ENSSSCG00000025293
UniProt: A0A8D0J0V4 A0A4X1T2L1
LinkDB
Position
13:complement(89261199..89333020)
AA seq 1008 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALA
YIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENKKAVLDQLKKHGFKLGPAPKTLGF
SLESGWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPL
LPHQKQALAWMVSRENSKELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKPLPFERIKKNQLKKECNVYDESVQLGGNNTSEKADGLTKGSRCS
GEPSISDVKGKNKYPKSELSSSRPKRRKTVVQYTESSDSEDIDTSDLPQKMKGKLKNTQS
ETKIRVRAGSSKVKEDAEFACALTSSTPTMKKKMLKKGASAVEGSKKTDVEERPRTTLII
CPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILTHDYGTK
GDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLS
FLKLKPFIDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPER
KVFIQHITLSDEERKIYQSVKNDGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHL
LTNAVSSSGPSGNDTPEELRKKLIKKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCK
PCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKSNMEWTSSSKINALMHA
LIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTE
AGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFI
VKDSVEENMLKIQNTKRELAAGAFGTKKTNASEMKQAKINEIRTLIDL
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgtcctggatgtttaagagagatcctgtttggaagtacttgcaaactgtccagtatgga
gtccatggaaattttccacgcctctcatatccaactttctttccacgttttgaattccaa
gatattattcctccagatgacttcctaacgagtgatgaagagctagattcagttttattt
ggtactttgagaggtcatgtagttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagagcctaataacccctatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaggttggccatttaaagaaagatcttgcagctgctttggcc
tatatcatggacaacaaattggcacaagttgaaggggtagttccttttggtgcaaataat
gcttttaccatgcctctacatatgactttttggggaaaagaagaaaataaaaaagcggtt
ttagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
agtttggaaagtggttggggctctggaagagctggaccaagctatagtatgccagttcac
gctgcagtacaaatgacaactgaacagcttaagacagaatttgacaaattgtttgaagat
ttaaaagaagatgataaaactcatgaaatggaaccagctgaggctgttgaaacaccatta
cttccacatcaaaaacaagctttagcttggatggtttcacgggaaaatagtaaagaactt
ccaccgttctgggaacagcgaagtgacttatactataacacaataactaatttttctgag
aaggaccgaccagaaaatgttcatggaggaattttagctgatgatatgggtttgggtaaa
actctgacagccattgcagtgattcttaccaacttccatgatggcaaacctcttcctttt
gaaagaattaaaaaaaatcaactgaagaaggaatgtaatgtttacgatgaatctgtgcaa
cttggagggaacaataccagtgaaaaggcagatggactaaccaaaggatctagatgtagt
ggagaacccagtatttcagatgtcaagggaaagaataaatatcccaagtcagaattgtct
agctcccgccccaaaagaaggaaaactgttgtacagtacactgaaagcagcgattcagag
gacattgacacaagtgacttgccacagaaaatgaaaggcaaactgaaaaatacacaatca
gagactaaaatcagagtcagagcaggatcatctaaggttaaagaagatgcagagtttgca
tgtgcacttacttcatctacccctacaatgaaaaagaaaatgttgaaaaagggagcatct
gcagtagagggttctaagaagactgatgttgaagagagaccaagaacaacattgatcatc
tgtccactttctgtgttaagcaactggattgaccagtttggacaacatataaaatcagat
gtgcacttgaatttttatgtttactatggtcctgatcgtgttagagacccagccttgctt
tcaaaacaggatattgttttgactacatacaatattttaactcatgactatggaactaaa
ggtgatagtccattacatagcataaggtggctaagagtgatcctggatgaaggacatgcc
atacgaaatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaaagaaga
tgggtattgacaggcactccaatccagaattctttaaaagacttgtggtctctcctttcc
tttttaaaacttaaaccatttattgatagagaatggtggcatagaacaatacagcgtcct
gtgacaatgggagatgaaggaggacttaggcgtttacagtccctaattaaaaatattaca
cttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagctaccagaacgt
aaagtatttattcagcatattacactttctgatgaagagagaaagatttatcaatctgtg
aagaatgatggcagagctactattggaaggtattttaatgaagggacggtccttgcacat
tatgcagatgtcctgggtcttttgcttagactgcggcagatttgttgtcatactcacctt
cttacaaatgcagtgtcttccagtggtccctcaggaaatgatacacctgaggaactacga
aagaagttaataaagaagatgaagttaattctgagctcaggttctgatgaagaatgtgca
atctgcttggattctttaacagttcctgtcataacacactgtgcacacgtcttttgtaaa
ccctgtatttgccaagtcattcagaatgagcagccacatgcaaaatgccctttatgcaga
aatgatatacatggagacaatttgttagaatgtcctccagaagaattggcatgtgacact
gagaagaaatctaacatggagtggacatccagttcgaagattaatgccttaatgcatgca
ttgattgacttaagaaagaagaaccccaacataaaaagtttagttgtttctcagtttaca
acattcctgtctttaatagaaacaccactcagagcctccggatttgtatttactcgtttg
gatggttccatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacactgaa
gcaggatctccaactataatgcttctgtctttaaaagcaggtggagttggtttgaatctt
tctgcagcttctcgagtatttttaatggatccagcctggaatccagctgctgaagatcag
tgctttgacagatgccatagactcggccagaagcaagaagttattatcacaaaattcatt
gtgaaggactctgttgaagaaaatatgctgaaaatacaaaacacaaagcgagaacttgca
gctggagcctttggaactaaaaaaactaatgctagtgaaatgaaacaggctaaaattaat
gaaatcagaactctaattgatttataa

DBGET integrated database retrieval system