Sus scrofa (pig): 100520988
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Entry
100520988 CDS
T01009
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5 precursor
KO
K04664
growth differentiation factor 5
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04060
Cytokine-cytokine receptor interaction
ssc04350
TGF-beta signaling pathway
ssc04390
Hippo signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100520988 (GDF5)
04390 Hippo signaling pathway
100520988 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100520988 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssc04052
]
100520988 (GDF5)
Cytokines and neuropeptides [BR:
ssc04052
]
Cytokines
Transforming growth factors (RSTK binding)
100520988 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
100520988
NCBI-ProteinID:
NP_001231226
Ensembl:
ENSSSCG00000023261
UniProt:
A0A8D2BTT8
F1S4W8
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All DBs
Position
17:complement(38792854..38796806)
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AA seq
499 aa
AA seq
DB search
MRLPKLLTFLLWHLAWLDLEFICTVLGAPDLGQRPQGARPGLAKAEAKERPPLAQNIFRP
GGHSYGGGATNARAKGGTGQTGGLTQPKKDEPKKLPPRSGGLEPKPGHPPQTRQAATRTV
TPKGQLPGGKAPQKAGSVPSPFLLKKAREPGSPREPKEPFRPPPITPHEYMLSLYRTLSD
ADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPAVRKQRYVFDISALEKDGLLAAELRIL
RKKPSDTAKPVAPGIGRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSGWEVFDIWKLFRN
FKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARS
GQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNPKARCSRKALHVNFKDMGWDDWIIAPL
EYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSA
NNVVYKQYEDMVVESCGCR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagactccccaaactcctcactttcttgctttggcacctggcttggctggacctggaa
ttcatctgcactgtcttgggtgcccctgacttgggccagagaccccagggggccaggcca
ggattggccaaagcagaagccaaggagaggccccctctggcccagaacatcttcaggcca
gggggtcacagctatggtgggggggccaccaatgccagggcaaaggggggcaccgggcag
acaggaggcctgacacagcccaagaaggatgaacccaaaaagctgccccccagatccggt
ggccttgaacccaagccaggacaccctccccagacaaggcaggctgcaacgcggactgtg
acccccaaaggacagcttcctgggggtaaggcaccccaaaaggcaggatctgtccctagt
cccttcctgctgaagaaggccagagagcctgggtcccctcgagagcccaaggagccgttc
cgcccgccccccatcacgccccacgagtacatgctctcgctgtacaggacgctgtccgat
gctgacaggaagggaggcaacagcagcgtgaagttggaggctggcctggccaacaccatc
accagctttattgacaaagggcaagatgaccgaggtcctgcagtcaggaagcaaaggtac
gtgtttgacattagcgccctggagaaggatgggctgctagcggccgagcttcggatcttg
cggaagaagccctcagacacggccaagccagtggcccccggcatcgggcgggctgcccag
ctgaagctgtccagctgccccagcggccgacagccggcagccttgctggatgtgcgctct
gtgccaggcctggatggatctggctgggaggtgttcgacatctggaagctcttccgaaac
tttaagaactcagcccagctgtgcctggagctggaggcctgggaacggggccgggccgtg
gacctccgtggcctgggctttgaccgggctgcccggcaggtccacgagaaggccctgttc
ttggtgtttggccgcaccaagaaacgagacctgttctttaatgaaattaaggcccgctct
ggccaggatgataagaccgtgtatgagtacctgttcagccagcggcgaaaacggcgggcc
ccactagccacgcgccagggcaagcggcccagcaagaaccccaaggcccgctgcagtcgg
aaggcgctgcacgtcaacttcaaggacatgggctgggatgactggattatcgctcccctt
gagtatgaagccttccattgcgaggggctatgcgagttccccttgcgctcccacttggag
cccacgaaccatgcggtcatccagaccctgatgaactccatggaccctgagtccacgcca
cccacctgctgtgtgcccacgcggctgagccccatcagcatcctcttcattgactctgcc
aacaatgtggtctataagcagtatgaggacatggtcgtggagtcttgtggctgcaggtag
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