Sus scrofa (pig): 100521320
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Entry
100521320 CDS
T01009
Symbol
TMC4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
100521320 (TMC4)
03037 Cilium and associated proteins [BR:
ssc03037
]
100521320 (TMC4)
Transporters [BR:
ssc02000
]
Other transporters
Pores ion channels [TC:
1
]
100521320 (TMC4)
Cilium and associated proteins [BR:
ssc03037
]
Other cilia and associated proteins
Stereociliary proteins
100521320 (TMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
PsbJ
Motif
Other DBs
NCBI-GeneID:
100521320
NCBI-ProteinID:
XP_003127464
Ensembl:
ENSSSCG00000003266
LinkDB
All DBs
Position
6:55955955..55970265
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AA seq
699 aa
AA seq
DB search
MEESWAWEPEAWGSSGGWPAPREASTGPSLSSVLNELPSAATLRYRGPGVLPWGALEEEE
EERSIQAFTESARKELQEPRPSRELPWPMQARRVHRQNLARDQVALNSGSRVAHWALLLR
RSKEKVREGLKTLKPWAWTLKRIGGQFGAGTESYFSLLRFLLLLNVLASVLKACMILLPT
WLEGTPPGPPAANASSPCGSYNPRPHGLVTFPTQLFNLLSGEGFLEWSPLFYGFYPPRPH
LAITYLCSVFAIGLLYLLLILHRSVSGLKQTLLAESGVLTSYSHRVFSAWDFGLSGEVHV
RLRQRNILFELQVELEEAVVRYQAAVRTLGQQARVWLVRVLINLAVLALLGAAFYGVYWA
TKATVNLQDMPPVQKMPLLKLGVNYLPSIFISVVNFILPVLFKLIAPLEGYTRSRQIVFI
LLRTVFLRLASLLVLLGTLWNQISCGEAECKACGYNYKELPCWETRLGQEMYKLLLFDLL
SGLAVMLLIQFPRKLLCGLCPGALGRFARTQEFQVPDEVLGLIYAQTVVWVGSFFCPLLP
LLNTAKFLLLFYLKKLTLFSTCSPASRTFRASTVNFFFPLVLLLGLAISAVPVLYGIFVI
PPSKLCGPFRGQLSIWSEIPKSIGSLPETAQNFLFFLGTQAFAVPLLLLSSILMAYTVAL
ANSYGRLISELKRQIETEAQNKVFLAQRAVALSSANGAL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagctgggcatgggaaccggaggcctggggctcctctggggggtggccagca
ccccgggaggccagcacaggcccttcgctgtcctctgtgctcaatgagctccccagtgct
gctacccttcggtaccgaggccctggggtcctgccctggggggccctggaggaggaggag
gaggagaggagcatccaggccttcacagaatctgcgcggaaggaactgcaggagccccgc
ccttcccgggagctgccctggcccatgcaggccagacgggtacacagacagaaccttgcc
agggaccaagtggctcttaactcagggtccagggtggcccactgggctctgctgcttcgg
aggtccaaggagaaggtgcgagaaggcctgaaaaccttgaagccctgggcgtggacgctg
aaaaggattgggggccaattcggcgcgggcaccgagtcctacttctccctgctgcgcttc
ctgctgcttctcaacgtgctggcctccgtgcttaaggcctgcatgattctgctgcccacc
tggctggaagggaccccgcctggtccccctgccgctaacgcctcctcgccctgcggctcc
tacaacccccgcccccacggcctggtcacctttcccacccagctcttcaacttgctctcc
ggagagggttttctagaatggtctccactcttctatgggttctacccaccccgcccacac
ctggccatcacctacctgtgctccgtctttgccattggcctcctctacctgctgctcatc
ctgcaccgctcggtgtctggcctgaagcagacgttgttggctgagtcaggggtcctgacc
agctacagccaccgggtgttctctgcctgggactttggcctcagcggggaggtccacgtg
cggctgcgccagcgcaacatcctctttgagttgcaggtggagctggaggaagcagtggtg
cggtaccaggctgcggtgcgaaccttgggccagcaagccagggtgtggttggtgcgggtg
ctgatcaacctggcggtgttggcgctcctgggagcagccttctacggagtctactgggcc
acaaaggccactgtgaacctgcaggatatgcctcctgtccagaagatgccactgctaaag
cttggggtcaattaccttccatccattttcatctccgtggtcaacttcatactaccagtg
ttgttcaagctcattgccccgctggaaggctacaccaggagccgccagatcgtttttatc
ctgctcaggactgtgtttctccgcctggcctccctgctggtcctgctcggcactctctgg
aatcagatctcttgcggggaggctgagtgcaaagcctgtggctataattacaaagaactt
ccgtgctgggagactcggctggggcaggagatgtacaaattgctgctgtttgatctgctg
tcgggtctggccgtcatgctgctcatccagttccctcggaagctgctctgtggcctctgt
ccgggggcgctgggtcgtttcgcgcggacccaggagttccaggtgcctgacgaagtgctg
ggactcatctacgcacagacggtggtctgggttgggagttttttctgccccttactgcct
ttgctcaacacggccaagttcctgctgcttttctatttgaagaagctcaccctcttctcc
acctgctccccggcctcccgcacatttcgggcctctactgtgaatttctttttccccctg
gtgcttctcctgggtctggccatctccgccgttcctgtgctatatggcatcttcgtgatc
ccaccttctaagctgtgtggtccattccgggggcagttgtccatctggtccgagatccct
aagtctatcggaagcctccccgagactgcccagaattttctcttcttcctggggacccag
gcatttgctgtgccccttctgctgttatccagcatcctgatggcatatactgtggccctg
gctaactcatatggacgcctcatctctgagctcaaacgccagatagagacggaggcacag
aataaagtcttcctggcacagcgcgctgtggcactgagctcggccaacggagctctttga
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