Sus scrofa (pig): 100521783
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Entry
100521783 CDS
T01009
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X3
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100521783 (RBBP6)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100521783 (RBBP6)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
U-box type E3
100521783 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
100521783
NCBI-ProteinID:
XP_003124588
Ensembl:
ENSSSCG00000007830
UniProt:
K9IVT3
A0A8D0S316
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPLPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSAHPASSMSSLTSNQSSLAPPVPGNPSSAPAPVPDITATVSISV
HSEKADGPFRDSDSKILPAAALASEHSKGASSLAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSQPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVP
PPGFPPAPANLSAPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDE
FTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFS
RSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQS
PNKRNVAQGETEREYFNRYREVPPPYDLKAYYGRNVDFRDPFEKERYREWERKYREWYEK
YYKGCAVGTQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYSAGQSHRSRNVGGNYPE
KLSSRDSHNQKDNTKSKEKESENAPGDGKGNKHKKHRKRRKGEENEGFLNPELLETSRKS
REPTSGEENKADSLFVLPGRDDATPVRDEPMDAESITFKSMSEKDKREKDKPKAKGDKTK
RKNDGSAASKKETVVKPAKGPQEKPDGEREKSPRSEPPLKKAKEETPKTDSVKSSSSQKD
EKIVGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDVKSEKLTSKEEKARKPNEKSKPLD
SKGEKRKRKTEEKSVDKDFESSSMKISKLEVTEIVKPSPKRKMEPDVEKMDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENVSNTKEPSEKLESTSGKVKQEKVKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKATTQPVSSVGKPASVIKNVSTKPSNAVKYTEKESESSEKIQKLTKE
VSHEITQHEVKSSKNCTSSEKGKTKDRDHSVTEKENPDKRKTSAQPEKDSNLDRLNEQGT
FKSLSQSSKETRTSDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKD
SPSRSKESTSGQKTKPREERDLSKKGTGDPKKSNSSPSRDKKPHDHKATYDTKRSSEETK
SVDKNPCKEREKHVLEAKSNKESSGSKSLCVLNPPDPQMEKEQVLTAPVDKNTVKPKPQL
SHSSRLSSDLTRETDEAAFEPDYNESDSESNISVKEEETSGKTSKEPKDKVVEKAKESLD
AAAVSQVDVTRSQSQSSPSISPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKH
KKHKKHKKHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataagttttcctctaaactcaactatgataccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagagtatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcatctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggtccaccacctccatcttatacc
tgtttccgttgtggtaaacccggccactatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaagtgaaagatcccaacatgaaaggtgcaatgcttaccaacactggaaaatacgcaata
ccaactatagatgcagaagcatatgcaattggaaagaaagaaaaaccgccttttttacca
gaggaaccatcttcttcttcagaagaagatgatcctattccagatgaattgttgtgtctc
atctgcaaagatattatgactgatgctgttgttattccctgctgtggaaacagttattgt
gatgaatgtataaggacagccctcttggaatcagatgaccatacctgtccaacatgtcat
caaaatgatgtctctcctgatgctttaattgccaataaattcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacaaaaagactaagaaaacagttacccccaccgcca
cccccattaccacctcctcgacccctcatccagcggaacttacaacctctgatgagatct
ccgatatcaagacaacaagatcctctcatgattccagtgacgtcttcatcagctcacccg
gcttcctctatgtcttcattaacctccaatcagtcttccttggcccctcctgtgcctgga
aatccatcttctgccccagcccctgtacctgatataactgccacagtctccatatcagtc
cactcagaaaaagcagatggacctttccgggattctgatagtaaaatactgccagctgca
gctcttgcatcagaacattcaaagggagcctcttcacttgcaattactgctcttatggaa
gagaagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcgttattg
catggacagttgatccccacaactggtccagtaagaataaacactgctcgtccaggtggt
ggtcgaccaggttgggaacattccaacaagcttgggtatctggtttctcaaccacagcaa
attagaagaggggagaggagctgctacagaagtataaaccgtggacgacaccacagcgaa
agatcacagagaactcaaggcccatcactaccagcaactccagtttttgtacctgtccca
ccccctcctttgtatcctcctcctccccatacactgcctctccctccaggtgttcctcca
ccacagttttctcctcagtttcctcctggccagcctccgcctgctgggtatagtgttccc
cctccagggtttcctccggctccagccaatttatcagcaccttgggtatcatcaggagtc
cagacagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaa
ttctatagagagcagcgacgactaaaagaagaggaaaagaaaaagtccaagctagatgag
tttacaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtagg
cgctcattttccaggtccaaatctccctatagtggttcatcctattcaagaagttcatat
acttattctaaatcaagatctggttcaacacgttcacgttcttactctcgatcatttagc
cgctcacactctcgttcctattcacggtcacctccataccccagaagaggcagaggaaag
agccgaaattaccgttcacggtctagatctcacgggtatcatcgatctaggtcaaggtca
cccccatatagacgatatcattcacgatcaagatctcctcaagcatttaggggacaatct
cctaataaacgcaacgtggcacaaggcgaaacagaacgtgaatattttaacagatacaga
gaagttccaccaccttatgacttgaaagcttattacgggaggaatgttgactttagagac
ccatttgaaaaagagcgttatcgagaatgggagaggaaatacagagagtggtacgaaaaa
tattataaaggctgtgctgttggaacacagcctaggccatcagcgaatagagagaacttt
tctccagagagatttttaccacttaatatcaggaattctcccttcacaagaggccgcaga
gaggattactctgctggacaaagtcatagaagtcgaaatgtaggtggcaactatccagag
aagctttcatcaagagacagtcacaatcaaaaggataatacaaagtcaaaagagaaggag
agtgaaaatgctccaggagatggcaaaggaaacaaacataagaaacacagaaaaagaaga
aagggagaggaaaatgaaggctttctaaacccagagttattagaaacttctcggaaatca
agggaacctacaagtggtgaagaaaataaggcagactcattgtttgttctcccaggtaga
gatgatgctacacctgttagagatgaaccaatggatgccgagtccatcacttttaaatca
atgtctgaaaaagacaagagagaaaaagataagcctaaagcaaaaggagacaagaccaaa
cggaaaaatgatggatctgctgcatccaaaaaagaaaccgttgtaaaacctgctaaagga
ccccaagaaaaaccggatggagagcgtgaaaaatctcctcgatctgaacctccacttaaa
aaagccaaagaggagactccaaagactgacagtgtgaaatcatcctcctctcaaaaagat
gaaaagatcgttggtacccccagaaaagctcactccaagtcagtaaaagaacaccaagag
acaaaaccagtcaaagaggaaaaagtaaagaaggactactccaaagacgtcaagtcagag
aagctcactagtaaggaagaaaaggcccggaagcctaatgagaaaagtaaacctcttgat
agcaaaggagaaaaaaggaaaagaaaaactgaagaaaagagtgtcgataaagattttgag
tcctcttcaatgaaaatctccaaattagaagtaactgaaatagtgaaaccatcaccaaag
cgcaaaatggaacctgatgttgaaaagatggataggacgcctgaaaaagacaaaatttcc
tcgtcaactgctccagccaaaaaaatcaagctgaacagagaaactggtaaaaagattgga
agtacagaaaatgtatctaatacaaaagaaccctctgaaaaattggaatcaacatctggc
aaagtcaaacaagaaaaagtcaaaggaaaagtcaggcgaaaagtaacgggaaccgaagga
tccagctcaacgctcgtggattacaccagtacgagttcaactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaagcgaactgtcatcaaaacgatggaagaatataat
aacgacaacacggcccctgctgaagatgttattattatgattcaggttcctcaatccaaa
tgggataaagatgactttgaatctgaagaagaagatgttaaagccaccacacagcctgta
tcaagtgtaggaaaacctgccagtgttataaaaaatgttagcactaaaccatcaaatgca
gtcaagtacactgaaaaagaaagtgagtcgtcggaaaaaattcagaaactcaccaaggaa
gtgagccatgaaattacacagcatgaggtcaaaagttcaaaaaactgtacatctagtgaa
aaagggaaaaccaaagatcgagatcattcagtgacagaaaaggaaaacccagacaagagg
aagactagcgcccagccagagaaagatagtaacctggaccgtctgaatgaacaaggaact
tttaaaagtctgtctcagtcttccaaagagactagaacttcagataagcatgattccatt
cgaggttcctcaaataaagacttcactcccaacagagacaaaaaaactgactacgacaac
agagagtattcaagttccaaacgtagagatgaaaggaatgaattaaccagaagaaaagac
tctccttctcggagtaaagaatctacatcaggacaaaaaactaagccacgggaggagaga
gatttgtctaaaaaaggaacaggagatcccaaaaaaagtaattccagtccctcaagagac
aaaaaacctcatgatcataaggccacttatgatactaaacgttcaagtgaagagacaaaa
tccgtagataaaaatccctgtaaggagcgtgagaagcatgtgttagaggcaaagagtaat
aaagagtcaagtggcagtaaatcactttgtgtgcttaacccaccagacccacagatggag
aaagaacaagttcttactgcaccagttgataagaacaccgtcaagcctaagccccagtta
agtcactcctctagactgtcctccgacttaactagagaaactgatgaagctgcttttgaa
ccagactataatgaaagtgacagtgaaagcaatatatctgtaaaagaggaagaaacttca
gggaagacatctaaggaaccgaaagataaagtagtggagaaagcgaaagagagcctggac
gcagcagcagtcagccaggtggatgtgaccaggagccagagtcaaagcagccctagtatc
agccccagtagaagtcacagcccttccggaagccaaactcgaagccacagtagcagtgcc
agctctgcagaaagtcaggacagcaagaagaagaagaagaagaaggaaaagaaaaagcac
aagaagcataaaaaacataagaagcataagaagcacgcaggcactgaagtagaattggaa
aaaagccaaaaacacaaacataagaaaaagaagtcaaagaagagcaaagataaagaaaag
gagaaggagaaggatgaccaaaaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
