Sus scrofa (pig): 100521829
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Entry
100521829 CDS
T01009
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100521829 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100521829 (MYO5B)
04131 Membrane trafficking [BR:
ssc04131
]
100521829 (MYO5B)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100521829 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
100521829 (MYO5B)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100521829 (MYO5B)
mRNA cycle factors
P-body specific factors
100521829 (MYO5B)
Membrane trafficking [BR:
ssc04131
]
Others
Actin-binding proteins
Myosins
100521829 (MYO5B)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
100521829 (MYO5B)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
100521829 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
100521829
NCBI-ProteinID:
XP_020948667
LinkDB
All DBs
Position
1:complement(99418242..99810934)
Genome browser
AA seq
1865 aa
AA seq
DB search
MDALVESHSQGPSLIQYTRVWIPDPDEVWRSAELTKDYKEGEKSLQLRLEDETIQEYPID
VQKNQLPFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPY
EQLPIYGQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSA
KYAMRYFATVSGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYH
IIGANMRTYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYASQGGD
TSIEGVDDAEDFEKTRQAFTLLGVRESHQISIFKIIASILHLGNVEIQAERDGESCSISP
GDEHLSNFCRLLGVEHGQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLF
GWIVEHINKALHTSLKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKL
EQEEYMKEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHS
GSQHFQKPRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFH
DDKDSVPATASSSKISVRSARPPLKTSNKEHKKTVGHQFRTSLHLLMETLNATTPHYVRC
IKPNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWAYHDFFNRYRVLIKKRELA
NTDKKAICRSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRG
WLQKVKYRRLKGATLTLQRYCRGLLARRLAEHLRRTRAAVVLQKQYRMQRARQAYQMVRR
ATVVIQAFARGMFVRRIYHQVLREHKATIIQKHVRGWMARRHFHRLRGAAIVIQCGFRRL
KAKQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVTSTHAM
EVEKLKKELAHYQQSQGEDSSPQLQEEVESLRMELQRAHSERKVLEDTHTREKDELRKRV
ADLEQENALLKDEKEQLNNQILCQSKDDFAQNSVKENLLMKKELEEERSRYQNLVKEYSR
LEQRYDNLRDEMTLVKQTPGHRRNPSNQSSLESDSNYPSISTSEVGDTEDALQQVEEIGL
EKAAMDMTVFLKLQKRVRELEQERRKLQVQLEKREQQDGKRVPAEQPKNDLDLDQDADLA
YNSLKRQELESENKKLKNELNELRKAVADQASAHTAAHGAPDGYSLLLNQLKLAHEELEV
RKEEVLILRTQIVSADQRRLASKSSEPNINARTSWPNSEKHVDQEDAIEAYHGVCQTNSP
FLMVEEMELCRLTESGWPPEGLTPRTGCLQRTAEVIRRLLEAQLQAQSREHEEEVEGLKA
QVEALKEELDKQQQTFCQTLLLSPEAQVEFGVQQEISRLTNENLDLKELVEKLEKNEKKL
KKQLKIYMKKVQDLEAAQALAQSEKRRHELNRQVTVQRKEKDFQGMLEYHKEDEALLVRN
LVTELKPQALAGTVPCLPAYILYMCIRHADYVNDDLKVHSLLTSTINGIKKVLKKHNDDF
EMTSFWLSNTCRLLHCLKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQ
QLIKIAEGLLQPMIVSAMLENESIQGLSGVKPTGYRKRSSSMADGDSSYCLEAIIRQMNS
FHTIMCDQGLDPEIILQVFKQLFYMINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWL
RGRNLHQSGAVQTMEPLIQAAQLLQLKKKTPEDAEAICSLCTALSTQQIVKILNLYTPLN
EFEERVTVAFIRTIQAQLQERNDPQQLLLDFKHMFPVLFPFNPSSLTMDSIHIPACLNLE
FLNEV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttggttgagagccactctcaggggccatcactcattcagtacacaagagtc
tggatccctgacccagatgaagtgtggcgctccgctgaattaaccaaggactacaaggag
ggtgagaagagcctccagctcagactggaagatgaaactattcaggagtaccccattgac
gtccaaaagaaccagcttcccttcctgcggaatccagatatcctggtgggagaaaatgac
ctaactgccttgagctatctacacgagcctgcagttttgcacaatttaaaggtccgtttc
ctggagtccaaccatatctacacttactgtggtatcgtgcttgttgccattaatccttat
gaacagttgccaatctatggtcaagatgtcatctatgcctacagtggccagaacatgggg
gacatggaccctcacatctttgctgtggcagaggaagcctacaagcagatggccagggac
gagaagaaccagtccatcatagtcagtggggagtctggagctggcaagaccgtgtcagcc
aagtatgccatgcgctattttgccaccgtgagtggctccgccagtgacaccaacatcgaa
gagaaggtgctggcatccagtcccatcatggaggccattggaaatgctaaaaccacacgc
aatgacaacagcagccgttttggaaagtacattcagattggctttgacaagaggtaccac
atcattggggccaacatgaggacgtacctgttggagaagtccagagtggtctttcaggca
gatgatgagaggaattaccacatcttttaccagctctgtgctgctgccagtctcccagaa
tttaaagagcttgcactaacctgtgcagaggacttcttctatgcgtcacaaggaggagac
acgtccatcgagggtgtggatgatgctgaggactttgagaagactcgacaagccttcact
ctccttggagtgagagagtcccatcagataagcatttttaagataattgcttccatccta
caccttggaaatgtggagattcaggccgagcgtgatggtgaatcctgtagtatatcaccc
ggggatgagcacctaagcaacttctgcagactgcttggggtggagcacggccagatggag
cactggctgtgccatcgcaagctggtcaccacctcagagacctacgtcaagaccatgtcc
ctgcagcaggtggtcaacgcgcgaaacgcactggccaagcacatctacgcccagctgttc
ggctggatcgtggagcacatcaacaaagccctgcacaccagcctcaagcagcattccttc
atcggagtcctggacatctacgggttcgaaacatttgaggtgaacagctttgagcagttt
tgtatcaattatgcaaacgagaagctccaacagcagttcaactcgcatgtattcaagctg
gagcaagaggagtacatgaaggagcagatcccttggaccttgattgatttttatgataat
caaccctgtatcgacctcatagaggctaagctgggcatcttggacctgttggatgaagaa
tgtaaggtccccaaaggaactgaccagaactgggctcagaagctctatgaccgacactca
ggcagccaacacttccagaaaccccgcatgtccaacacggccttcatcgtcgtccacttt
gcagataaggtggagtacctttcagatggttttctggagaaaaacagagacacagtgtac
gaagagcagatcaacatcctgaaggccagcaagttcccactcgtggctgacttgttccat
gatgacaaagactctgttcctgccaccgcctcatcatcaaagatcagtgttcgttcagcc
agaccccccttgaaaacctctaacaaggagcacaagaagaccgtgggccaccagttccgc
acctccctgcacctgctcatggagaccctgaacgccacgacacctcactacgtccgctgc
atcaagcccaacgatgagaagctccccttccacttcgacccaaagagagctgtgcagcag
ctccgagcgtgtggggtgctggaaaccattcgcatcagcgcagccggctacccgtccagg
tgggcctaccatgacttcttcaaccggtatcgggtgctaatcaagaagagagagctcgct
aacacagacaagaaggccatctgcaggtctgtgctggagagcctcatcaaggatcctgac
aagttccagtttggccgcaccaagatcttcttccgggcgggccaggtggcctacctggag
aagcttcgggctgacaagttccgggcagccaccatcatgatccagaaaaccgtccggggc
tggctgcagaaggtgaagtaccgcaggttgaagggggctaccttaaccctgcagaggtac
tgccgaggactcctggcccgcaggctggctgagcacctgcggagaacccgggcggccgtg
gtgctccagaagcagtaccgcatgcagagggcccgccaagcctaccagatggtccgcagg
gctactgtcgtcatccaggccttcgctcggggcatgtttgtgcggagaatctatcaccag
gtccttagggagcacaaggccaccatcatccagaagcatgtgcggggctggatggctcgc
aggcacttccatcggctgcggggtgcggccattgtcatccagtgtggcttccggaggctc
aaggccaagcaggagctgaaagccctgaagatagaggcccgctcagcagagcacctgaaa
cgcctcaacgtgggcatggagaacaaggtggtccagctgcagcgcaagatcgacgaccag
aacaaagagttcaagacactgtcggagcagctgtcagcagtcacctccacacacgccatg
gaggtggagaagctgaagaaggagctggcccactaccagcagagccagggtgaggacagc
agcccgcagctgcaggaagaggtcgagagcctgcggatggagctgcagagggcccactcg
gagcgcaaggtcctggaggacacccacacccgggagaaggatgagctgagaaagcgagtt
gcagacctggagcaagaaaatgctctgttgaaagatgagaaagaacagcttaacaaccaa
atcctgtgccaatccaaagacgactttgcccagaactcagtcaaggaaaacctcctgatg
aagaaggagctggaggaggagcgctcccggtaccagaacctggtgaaggagtattcccgg
ctggagcaaagatatgacaacctgcgggatgagatgacccttgtcaagcaaaccccaggc
cacaggcggaacccatcaaaccaaagcagcttagagtctgactctaattacccctccatc
tccacatctgaggtcggagacacagaggatgccctccaacaggtagaggaaatcggcctg
gagaaggcagccatggacatgacagtcttcctgaagctgcagaagagagtgagggagctt
gagcaggagaggaggaagctgcaggtacagttggagaagagagaacagcaggacggcaag
agagtcccggcggaacaaccaaagaatgacttagatctggaccaggatgcagatctagcc
tacaatagcctgaagaggcaggagctggagtcggagaacaagaagctgaagaatgagctg
aatgaactgaggaaagccgtggccgaccaagcctcagcgcacacagccgcccacggcgcc
ccagatggctatagcctcctgctgaaccagctgaagctggcccacgaggagctggaggtg
cgcaaggaggaggtgctcatcctgaggacccagatcgtgagtgcggaccagcgccgcctg
gcgtccaagagctcggagccgaacatcaatgccagaacaagctggcctaacagcgaaaag
catgtggatcaggaagatgctatcgaggcctatcacggggtctgccagactaacagcccc
tttctcatggttgaggaaatggagctgtgcaggctcacggagtcagggtggcctccagaa
ggactgactcccaggaccggctgcctccagcgcactgcagaggtgatccgaaggttgctg
gaggcccagctgcaggcccagagccgtgagcatgaggaggaggtggagggtctcaaggcc
caggtggaggccctgaaggaggagctggacaagcagcagcagaccttttgccagacgctg
ctgctctccccagaggcacaggtggagttcggcgtccagcaggagatatcccggctgact
aacgagaacctggaccttaaagaactggtggaaaagctggaaaagaatgagaagaagctc
aaaaagcaattaaagatttacatgaagaaagtccaggacctggaagctgcccaggcactg
gcgcagagtgagaagaggcgccacgagctcaacaggcaggtcaccgtgcagcggaaagag
aaggacttccagggcatgttggagtaccacaaggaggacgaggccctgctcgttcggaat
ctggtgacagagctgaagccccaggccctggcgggcacagtgccctgcctcccagcctac
atcctctacatgtgtatcaggcacgcggactacgtgaacgatgacctcaaggtgcactcc
ctgctgacctccaccatcaacggcatcaagaaagtcctcaagaagcacaatgatgacttt
gagatgacgtcattctggttatccaatacctgccgcctcctgcattgcttgaagcagtac
agcggcgatgagggcttcatgactcagaacaccgccaagcagaacgagcactgccttaag
aactttgacctcactgaataccgccaggtgctgagcgacctttccattcagatctaccag
cagctcattaaaatcgctgagggcctgttgcagcccatgatagtgtctgccatgttggag
aatgaaagcattcagggtctatccggtgtgaagccaacgggctaccggaagcgctcctcc
agcatggcggacggggatagctcgtactgcctggaagccatcatccgccagatgaattcc
tttcacacaatcatgtgtgaccagggcctggaccctgagatcatcctgcaggtgttcaaa
cagctcttctacatgatcaacgcagtgactctcaacaacctgcttctgcggaaggacgtc
tgctcgtggagcacaggcatgcagctcaggtacaacataagtcagctggaggagtggctt
cgaggaagaaacctgcaccagagcggagctgttcagaccatggaacctctgatccaggca
gcccagctcctgcagttaaagaagaaaacccctgaggacgccgaggccatctgctccctg
tgcactgccctcagcacccagcagattgtcaaaattttgaacctttatactcctctgaat
gaattcgaagaacgggtaacagtggcctttatacgaacaatccaggcacaactgcaagag
cggaatgatcctcagcaactgctgttagacttcaagcacatgtttccagttttgttccca
tttaatccatcttctctgaccatggactccatccacatcccagcgtgtctcaacctggag
ttcctcaatgaagtctga
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integrated database retrieval system
