Sus scrofa (pig): 100521988
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Entry
100521988 CDS
T01009
Symbol
ITGB4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04151
PI3K-Akt signaling pathway
ssc04382
Cornified envelope formation
ssc04510
Focal adhesion
ssc04512
ECM-receptor interaction
ssc04518
Integrin signaling
ssc04810
Regulation of actin cytoskeleton
ssc04820
Cytoskeleton in muscle cells
ssc05165
Human papillomavirus infection
ssc05410
Hypertrophic cardiomyopathy
ssc05412
Arrhythmogenic right ventricular cardiomyopathy
ssc05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100521988 (ITGB4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100521988 (ITGB4)
04518 Integrin signaling
100521988 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100521988 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100521988 (ITGB4)
04810 Regulation of actin cytoskeleton
100521988 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100521988 (ITGB4)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100521988 (ITGB4)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100521988 (ITGB4)
05412 Arrhythmogenic right ventricular cardiomyopathy
100521988 (ITGB4)
05414 Dilated cardiomyopathy
100521988 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
100521988 (ITGB4)
04515 Cell adhesion molecules [BR:
ssc04515
]
100521988 (ITGB4)
04090 CD molecules [BR:
ssc04090
]
100521988 (ITGB4)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100521988 (ITGB4)
Exosomal proteins of bladder cancer cells
100521988 (ITGB4)
Cell adhesion molecules [BR:
ssc04515
]
Integrins
Integrin beta subunits
100521988 (ITGB4)
CD molecules [BR:
ssc04090
]
Proteins
100521988 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
EGF_Teneurin
I-EGF_1
PSI_integrin
FN3_DSCAM-DSCAML_C
EGF_integrin
EGF_TEN
EGF_2
vWA_SIBA-E
SEA
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
100521988
NCBI-ProteinID:
XP_020922281
Ensembl:
ENSSSCG00000017204
Vega:
OTTSUSG00000002203
LinkDB
All DBs
Position
12:complement(5651292..5685601)
Genome browser
AA seq
1868 aa
AA seq
DB search
MAGPRRSPWTSLLLAALLSVSFPGDMANRCKKAQVKSCTECIRVDKDCAYCTDEMFKERR
CNTQAELVAAGCQLESMVVMESSFEITEETQIDTTLRRSQVSPQGLRVRLRPGEERHFEL
QVFEPQESPMDLYILMDFSNSMSDDLDNLKKMGQDLANVLRQLTSDYTIGFGKFVDKVSV
PQTDMRPEKLKEPWPNSDPPFSFKNVISLTEDVEEFRTKLKGERISGNLDAPEGGFDAIL
QTAVCTRDIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMKRNDEECHLDATGTYTQYK
AQDYPSVPTLVRLLGRHNIIPIFAVTNYSYSYYEKLSSYFPVSSXGVLQEDSSNILDLLR
EAFDRIRSNLDIRALESPRGLRTEVTSKIFLKTDTGSFHIRRGEVGTYQVQLRAIEDLDG
THVCQLPEADQKGNIHLKPSFSDGLRMDVDIICDVCSCELQKEEQSPRCSFHGDFMCGHC
VCSEGWSGKTCNCRTGSLSDLEPCLREGEDKPCSGRGECQCGHCVCYGEGRYEGQFCEYD
NFQCPRTSGFLCNDRGRCSMGQCVCEPGWTGLSCDCPLSNATCIDSNGGVCNGRGNCECG
RCHCNQQSLYTDTVCEINHSAIRLGLCEDLRSCVQCQAWGTGEKKGHTCKECSFKVKMVD
ELKKAEEVVEYCSFRDEDDDCTYSYTVEGDGAPGPNSTVLVQRRKECPPGTFWWLIPLLI
FLLLFPALLLLLCWKYCACCKACLALLPCCNRGHMVGFKEDHYMLRENLMASDHLDTPML
RSGNLKGRDTVRWKITNNVQRPGFASHAAGINPTELVPYGLSLRLARLCTENLLKPDTRE
CDQLRQEVEENLNEVYRQIAGAHQVQQTKFRQQPNAGKKQDHTIVDTVLMAPRSAKQALL
KLTEKHVEQGAFHDLKVARGYYTLTADQDARGMVEFQEGVELVDVRVPLFIRPEDDDEKQ
LLVEAIDVPVGTATLGRRLVNITIIKEQASGIVSFEQPEYFVSSGEHVARIPVVRRVLDN
GRSQVSYRTQDNTAHGSRDYIPAEGELLFQPGETWKELQVKLLELQEMDSLLRGRQPRRF
YIQLSNPKFGARLGQPHLATVIIGDRDEVDRNFVNQTLSSPPPPRGELGAPQNPNAKAAG
SRKIHFNWLPPPGKPTGYRVKYWIQGDPESEAHLLDSTVPSVELTNLYPYCDYEMKVCAY
GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGL
VNEDNRPIGPMKKVLVDSPKRRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQ
PKRPMSIPIIPDIPIVDAQGGEDYESFLMYSDDVLRSPAGSQRPSVSDDTGSGWKFEPLL
GEELDLRRVTWRLPPELIPRLSASSRRSSDSAELPRGPPEDGGGGLRGTGGEGEHLVNGR
MDCAFPGSANSLHRMTVSNAAYGPHLSPHLPRHVLSTSSTLTRDYHSLTRTEHSHSATLP
RDYSTLTSLSSQSLPPIWEDGRSRLPLSWALGARSRAQMKGSPRSGDSRDSIILAGRPAA
LSWRPDSRLAAGVPNTPTRLVFSALGPTSLKVSWQEPQCERALQGYSVEYQLLNGGELHR
LNIPNPSQTSVVVEDLLPNHSYVFRVRAQSQEGWGPEREGVITIESQVHPQSPLLPLPGS
AFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPDGDILGYLVTCEMAHGGEPATTFLVDG
DSPESRLTVPGLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGGPFPQLGSHSGLFQL
PVSGEYSSITTTHTSTAEPFLLDGLTLGSQRLEASGSLTRHVTQEFVSRTLTSTGTLSSQ
VDQQFFQS
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggcagggccgaggcgcagcccgtggaccagcctgctgctggcagcccttctgagtgtc
agctttcccggggacatggccaaccgctgcaagaaggcccaggtgaagagctgtaccgag
tgcatccgtgtggacaaggactgtgcctactgcacagacgagatgttcaaggaacggcgc
tgcaacacccaggcggagctggtggctgcgggctgccagctggagagcatggtggtcatg
gagagcagcttcgagatcacagaggaaacccagatcgatacgaccctgcgacgcagtcag
gtgtcaccgcaggggctgcgggtgcggctgcggccgggcgaggagcggcacttcgagctg
caggtgttcgagccccaggagagccccatggacctgtacatcctcatggacttctccaac
tccatgtctgacgatctggacaacctcaagaagatggggcaggatctcgccaacgtcctg
aggcagctcaccagtgactacacgattggatttggcaagttcgtggacaaagtcagcgtc
cctcagacggacatgagacccgagaagctgaaggagccctggcccaacagtgaccccccg
ttctccttcaagaatgtcatcagcctgacggaagacgtggaggaattccggactaagctc
aagggagagcggatctcgggcaacctggatgcgcccgaagggggtttcgatgccatcctg
cagacggccgtgtgcaccagggacatcggctggcgccctgacagcacccacttgctcgtg
ttctccaccgagtcagccttccactacgaggccgacggtgccaacgtgctggccggcatc
atgaagcgcaacgacgaggagtgccacctggacgccacgggcacctatacccagtacaag
gcgcaggactacccgtcggtacccaccctggtgcgcctgctcggccgacacaacatcatc
cccatcttcgccgtcaccaactactcctacagctactacgagaagctgtcctcgtatttc
ccggtctcttcgnctggggtgctgcaggaggactcgtccaacatcctggatctgctgcgg
gaggcctttgaccgtatccgctccaacctggacatccgggctctggaaagcccccgaggc
ctgaggaccgaggtcacctccaagatattcctaaagaccgacacggggtccttccacatc
cggcggggggaagtgggcacgtaccaagtgcagctgcgggccatcgaggacctggacggg
actcacgtgtgccagctgccagaagcggaccagaagggcaacatccatctgaagccctcc
ttctccgatggcctcaggatggatgtggacattatctgtgacgtgtgttcctgtgagctg
caaaaagaggagcagtcacctcgctgcagcttccacggggatttcatgtgcggacactgt
gtgtgcagcgagggctggagcggcaaaacctgtaactgccgcacgggctccctgagcgac
ctggagccttgcctgcgggagggcgaggacaagccgtgttccgggcggggcgagtgccag
tgtgggcactgcgtgtgctacggcgagggccgctacgagggccagttctgcgaatacgac
aacttccagtgtccccgcacctccggcttcctctgcaatgaccggggacgctgctccatg
ggccagtgtgtgtgtgagccgggctggacaggcttgagctgtgactgtcctctcagcaat
gccacctgcatcgacagcaatgggggcgtctgtaatgggcgtggcaactgtgagtgtggc
cgctgccactgcaaccaacagtccttgtacacggacactgtctgcgagatcaaccactca
gcgatccgcctgggcctctgtgaggacctgcgctcctgcgtgcagtgccaggcatggggc
accggagagaagaaagggcacacgtgcaaggagtgcagtttcaaggtcaagatggtagat
gagcttaagaaagcggaggaggtggtggagtactgctccttccgggacgaggacgacgac
tgtacctacagttacaccgtcgagggtgatggcgcccccgggcccaacagcaccgtcctg
gtgcagaggaggaaggagtgccctcccggcaccttctggtggctcatccccctgctcatc
ttcctcctgctgttcccggccctgttgctgctgctctgctggaagtactgtgcctgctgc
aaggcctgcctggcactactcccttgctgcaaccgaggtcacatggtgggcttcaaggaa
gaccactacatgctgcgggagaacctgatggcatcggaccacctggacacgcccatgctg
cgcagcgggaacctcaaagggcgggacacggtccgctggaagatcaccaacaacgtgcag
cggcctggctttgcctcgcacgccgccggcatcaaccccacggagctggtgccctacggg
ctgtccctgcgccttgcccgcctttgcaccgagaacctgctgaagcctgacacccgagag
tgcgaccagctgcgccaggaggtggaggagaacctgaacgaggtgtacagacaaatcgca
ggcgcgcaccaggtccagcagaccaagttccggcagcagcccaacgctgggaaaaagcag
gaccacaccattgtggacacggtgctgatggcgccccgctcggccaagcaggccctgctg
aagctgacggagaagcacgtggagcagggggccttccacgacctcaaggtggcccgcggc
tactacaccctcacggcagaccaggatgcccggggcatggtggagttccaggaaggcgtg
gagctggtggatgtgcgggtgcctctcttcatccggcctgaggacgacgatgagaagcag
ctgctggtggaggccatcgatgtgcccgtgggcactgccaccctcggccgccgcctggta
aacatcacgatcatcaaggagcaagccagcgggatcgtgtcctttgagcagcccgagtac
tttgtcagcagcggggagcacgtggcccgcatccccgtcgtccggcgtgtcctggacaac
ggcaggtcccaggtctcctaccgcacacaggacaacacagcacatggcagccgggactac
atccctgcagagggtgaactgctgttccaacctggggaaacctggaaggagctgcaggtg
aagctcctggagctgcaagagatggactccctcctgcgaggccgccagccccgccgcttc
tacatccaactcagcaatcccaagttcggggcccgcctgggccagccccacttggccact
gtcatcattggggaccgagatgaagtggaccggaactttgtaaaccagacgctgtcatcg
cccccacccccccggggtgaactgggtgccccacagaaccccaatgccaaggctgctggg
tcccggaagatccatttcaactggctgccccctcctggcaagccgacagggtacagggta
aagtactggatccagggcgaccccgagtccgaagcccacctcctcgacagcacagtgccc
tcagtggagctcaccaacctgtacccgtactgcgactatgagatgaaggtgtgcgcctac
ggggcgcagggcgagggcccctacagttccctggtgtcctgtcgcacccaccaggaagtc
cccagcgagcccgggcgtctggccttcaacgtcgtctcctccacggtcacccagctgagc
tgggccgagccggccgagaccaacggcgagatcacagcctatgaggtctgctacggcctg
gtcaacgaggacaaccgacccatcgggcccatgaagaaggtgctggtggacagccccaag
cggcggatgctgctcatcgagaacctgcgggagtcccagccgtaccgctacacggtcaag
gctcgcaacggcgcaggctgggggcctgagcgagaggccatcatcaacctggccacccag
cccaagcggcccatgtccatccccatcatccccgacatccccatcgtggacgcccagggc
ggcgaggactacgagagcttcctcatgtacagtgacgacgtgcttcgctccccggccggc
agccagaggcccagcgtctccgatgacactggcagcggctggaagttcgagcccctgctg
ggggaggagctggacctgcggcgcgtcacgtggcggctgcccccggagctcatcccgcgc
ctctccgccagcagccgccgctcctccgactccgccgagctgccccgcgggcccccggag
gacggcggcgggggcctgcggggcactggcggggagggagagcacctggtgaacgggcgg
atggactgtgccttcccgggcagcgccaactccctgcacaggatgaccgtgagcaacgcc
gcctacggcccccacctgagcccgcacctgccccgccacgtactgagcacgtcctccacg
ctcacgcgggactaccactcgctgacccgcacggaacactcgcactcggccacgctgccc
cgggactactccaccctcacctccctctcctcccagagcctccctcccatctgggaagac
gggaggagcaggcttccgctgtcctgggccctgggggcccggagtcgggctcagatgaag
gggtccccccgctccggggactcacgggactctataatcctggctgggcggccagcagcg
ctctcttggcgcccagactcccgcttggctgcgggtgtgcccaacacacccacccgcctg
gtgttctcggccctgggacccacatctctgaaagtgagctggcaggagccacagtgtgag
cgggcactgcagggctacagcgtggagtaccagctgctgaatggcggtgagctgcatcgg
ctcaacatccccaaccccagccagacatcagtggtggtagaagatcttctgcccaaccac
tcctacgtgttccgcgtgcgggcccagagccaggaaggctggggcccagagcgcgagggc
gtcatcaccatcgagtcgcaggtgcacccacagagcccactccttcccctgccgggctct
gccttcactttgagcacacccagtgccccaggcccactggtgttcaccgccctgagccca
gattctctgcagctgagctgggagcggccgcgcaggccggacggggacatcctcggctac
ctggtgacgtgtgagatggcgcacggaggagagccagccaccacgttcctggtggacggc
gacagccctgagagccggctgaccgtgccgggcctcagcgagaacgtgccctacaagttc
aaggtgcaggccaagaccacccaaggcttcgggccagagcgcgagggtatcatcaccatc
gagtcccaggacggaggccccttcccacagctgggcagccactcggggctcttccagctc
ccagtgtcgggcgagtacagcagcatcaccaccacccacaccagcaccgccgagcccttc
ctgctggatggactgaccctagggtcccagcgcctggaagcgagtggctccctcacccgg
cacgtgacacaagagtttgtgagccggacgctgaccagcactggcaccctcagcagccag
gtggaccaacagttcttccagagctga
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integrated database retrieval system
