Sus scrofa (pig): 100521999
Help
Entry
100521999 CDS
T01009
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
ssc04714
Thermogenesis
ssc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100521999 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100521999 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100521999 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100521999 (SMARCD3)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100521999 (SMARCD3)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100521999 (SMARCD3)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100521999 (SMARCD3)
PBAF complex
100521999 (SMARCD3)
GBAF(ncBAF) complex
100521999 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100521999
NCBI-ProteinID:
XP_003134625
Ensembl:
ENSSSCG00000016435
UniProt:
A0A4X1UQ39
F1SSN0
LinkDB
All DBs
Position
18:5958466..5989120
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYI
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtacgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccggccagagccag
gcccagagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggatccgagagctggtcccagagtcccag
gcttacatggacctcctggcgtttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggctctgaagaggccaatgaagcaaaagcggaagctacgtctttat
atctccaatacttttaaccctgcgaagcctgatgcagaggattcggatggcagcatagcc
tcctgggagctgcgggtggaggggaagctcctggatgaccccagcaagcagaagcggaag
ttctcgtccttcttcaagagtttggtcattgagctggacaaagacctctatggccctgac
aaccacctggtggagtggcaccggacgcccacaactcaggagacggacgggttccaggtg
aagaggccgggggacctgagcgtgcgctgcacgctgctcctcatgctggactaccagccc
ccccagttcaaactggatccccgcctggcccggctgctggggctgcacacgcagagccgc
tcagccattgtccaggccctgtggcagtacgtgaagaccaacaggctgcaggactctcac
gacaaggagtacatcaacggggacaagtatttccagcagatttttgattgtccccggctg
aagttttctgagatcccccagcgcctcacagctctgctgttgccccctgaccccattgtc
atcaaccacgtcatcagcgtggacccgtcggaccagaagaagacagcgtgctacgacatt
gacgtggaggtagaggagccactgaagggacagatgagcagcttcctcctgtccacagcc
aaccagcaggagatcagcgctctggacagtaagatccacgagacgattgaatccataaac
cagctcaagatccagagggacttcatgctaagcttctccagagaccccaaaggctacatc
caagacctcctccgctcccagagccgggacctcaaggtgatgacagacgtggcaggcaac
cctgaggaggagcggcgggctgagttctaccaccagccctggtcccaggaagctgtcagc
cgctacttctactgcaagatccagcagcgcaggcaggagctggagcagtcgctggttgtg
cgcaacacctag
DBGET
integrated database retrieval system
