Sus scrofa (pig): 100522008
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Entry
100522008 CDS
T01009
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X2
KO
K06842
semaphorin 6
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100522008 (SEMA6A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
100522008
NCBI-ProteinID:
XP_003354294
Ensembl:
ENSSSCG00000014224
UniProt:
A0A8D0MV68
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Position
2:complement(120560095..120687597)
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AA seq
1030 aa
AA seq
DB search
MRSEVLLLYFTLLHFAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNSTQRHRLDIQM
IMIMNRTLYIAARDHIYTVDIDTSQTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANIALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINRPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEGG
TCAHLSPSSRLTFEQDIERGNTDGLGDCHNSFVALNGHSSSLLPSTTTSDSAAQEGSESR
RGMLDWNDLLHSPDSTDSLGAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFV
MGAVFSGIIVYCVCDHRRKDVSSVQRKEKELTHSRRGSMSSVTKLSGLFGDTQSKDPKPE
AILTPLMHNGKLTTPGNTAKMLIKADQHHLDLAALPTPESTPTLQQKRKPSRGSREWERN
QNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQHEYVDQPKMSEVAQ
MALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREASLGPPGASLSQNGL
SKRLEMHHSSSYGLDYKRSYPTNSLTRSHQAATLKRNNTNSSNSSHLSRNQSFGRGDNPP
PAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRAGLKRTPSLKPDVPPKPSFAPLS
TSMKPNDACT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagtcttgctgctatatttcacactgctacactttgctggggctggtttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacagcacacagaggcacaggctggacatccagatg
attatgatcatgaacagaaccctctacattgctgctagggaccatatttatactgttgat
atagacacctcacaaacagaagaaatttactgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacatgcagaatgaagggaaagcataaggatgagtgtcacaacttt
attaaagttcttctaaagaaaaacgatgacactctgtttgtctgtggaacgaatgccttc
aacccttcctgcagaaactataagatggatactttggaaccttttggggatgaatttagt
ggaatggccagatgcccttatgatgccaaacatgccaacattgcactgttcgcagacgga
aagctgtactctgctacagtgactgacttccttgccattgatgccgtcatttaccggagt
ctgggagacagcccaacccttcggaccgtcaagcatgattcaaaatggttgaaagaacca
tactttgtccaggctgtggattatggagactacatctatttcttctttagggaaatagcg
gtggagtacaacaccatgggaaaggtcgttttccccagagtggctcaggtttgtaagaat
gacatgggagggtctcaaagagtcctggagaaacagtggacatctttccttaaggctcgc
ctcaactgctccgttcctggagactctcacttttatttcaacatactgcaggcagttaca
gatgtgattcgtattaacggccgtgacgttgtcctggcaaccttttccacaccttataac
agcatccctggctctgcagtgtgtgcctatgacatgcttgatattgccaatgtttttact
gggagattcaaggaacagaagtctccagattccacgtggacaccagttcctgatgaacga
gtgcctaagcccaggccaggttgctgcgctggctcctcctccttagaaaaatatgcaact
tccaatgaatttcctgatgataccctgaatttcatcaaaacacacccactcatggatgag
gccgtgccttccatcatcaacaggccatggttcctaaggacgatggtcagataccgcctg
accaaaattgcggtggacactgctgctgggccatatcagaatcacactgtggttttcctg
ggatcagaaaagggaatcatcttgaagttcttggccaggataggaaacagtggtttccta
aatgacagcctcttcctggaggagatgagcgtttacaatcctgaaaagtgcagctatgac
ggagtcgaagacaagaggattatgggcatgcagctggacagagcaagcagctctctgtat
gtagctttctccacctgtgtgataaaggttccccttggccggtgtgaacgacatggcaag
tgtaaaaaaacctgtattgcctccagagacccatactgtgggtgggtaaaggaaggtggc
acctgtgcccatctgtcacccagcagcagactgacttttgaacaggacatagaacgtggc
aatacagatggcctgggagactgtcacaattccttcgtggcactgaatgggcactccagt
tccctcttgcccagcaccaccacatccgattcggcggctcaagaggggtctgagtctagg
cgaggaatgctggactggaatgatctgctccattcacctgacagcacagactctttgggg
gcagtgtcttcccataaccaccaagacaagaagggagtgattcgggaaagttacctcaaa
ggccacgaccagctcgttcctgtcaccctcctagccatagcggtcattctggcttttgtc
atgggggccgtcttctcgggcatcatcgtctattgcgtttgtgatcaccggcgcaaagac
gtgtcgtcggtgcagcgcaaggagaaggagctcacccactcgcgccgcggctccatgagc
agcgtcaccaagctcagtggcctctttggggacacccagtccaaagaccccaagccagag
gccatcctcacgccactcatgcacaatggcaaactcaccactcctgggaacacggccaag
atgctcatcaaagctgaccagcaccacctggacctggccgccctgcccaccccagagtcc
accccgacgctgcagcagaagcgcaagcccagccgcggtagccgcgagtgggaacggaac
cagaacctcatcaacgcctgcaccaaggacatgccccccatgggctcccctgtgatcccc
acggaccttcccctgcgggcctctcccagccacatccccagcgtggtggtgctgcccatc
acgcagcagggttaccagcatgagtacgtggaccagcccaaaatgagcgaggtggcccag
atggcgttggaggaccaggcagccaccctggagtataagaccatcaaggaacacctcagc
agcaagagtcccaaccatggcgtgaacctggtggagaacctggacagcctgccccccaaa
gtcccccagcgggaggcctccctgggccctcccggagcctccctgtctcagaatggcctg
agcaagcggctagagatgcaccactcctcgtcctacgggcttgactataagaggagctac
cccacgaactcgctcacgagaagccaccaggccgccacactcaaaagaaacaatactaac
tcctccaattcctcccacctctccagaaaccagagctttggccggggggataacccgccc
cccgccccgcagagggtggactccatccaggtgcacagctcgcagccctctggccaggcc
gtgactgtttcgaggcagccaagcctcaatgcctacaactcactgaccagggcggggctg
aaacgcaccccttcgctaaagccggacgtgcccccgaaaccttcctttgcccccctttcc
acatccatgaagcccaatgacgcgtgtacataa
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