KEGG   Sus scrofa (pig): 100522201
Entry
100522201         CDS       T01009                                 
Name
(RefSeq) histone H2AX
  KO
K11251  histone H2A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03082  ATP-dependent chromatin remodeling
ssc04217  Necroptosis
ssc04613  Neutrophil extracellular trap formation
ssc05034  Alcoholism
ssc05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100522201
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    100522201
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100522201
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    100522201
  09165 Substance dependence
   05034 Alcoholism
    100522201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100522201
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100522201
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histones
    100522201
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100522201
SSDB
Motif
Pfam: Histone_H2A_C Histone Histone_ABTB CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 100522201
NCBI-ProteinID: XP_003129998
LinkDB
Position
9:complement(46308824..46310494)
AA seq 274 aa
MASDLTVYVFRFWSRAVVFKSGALHMDWLHRRVVCCGLAAAPPRLFPRAEGFQILPIGGR
VLSAGARHRLVNCSQPEAGIKEKSQSGGRGGVPWGAYKGGFWARAAPVGLRRRLFFVPAR
RSPQRTSTSRSMSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAP
VYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVL
PNIQAVLLPKKTSATVGPKAPAGGKKATQASQEY
NT seq 825 nt   +upstreamnt  +downstreamnt
atggcttcagacctcactgtctatgtcttccggttctggagtagggctgtagtgtttaaa
tctggcgcgcttcacatggattggctacaccggagagtggtttgctgtgggctcgctgca
gctcctcctcgcctctttccccgggcagaaggttttcaaattctaccaatcggagggcgc
gttctctcagccggggcgcgccaccgattggttaactgcagccaaccggaggcgggtatt
aaagaaaagagccaatcaggagggcgcgggggtgtgccctggggggcttataagggcggc
ttctgggcgcgcgcggcaccagttggactgcggcggcggctgtttttcgtccctgcgagg
cgttctcctcaacgtacatctacctcacgcagcatgtcgggccgcggcaagaccggcggc
aaggcccgcgccaaggccaagtctcgctcatcacgcgccggcctccagttcccggtgggc
cgcgtgcaccgcctgctgcgcaagggccactatgccgagcgagtgggcgccggcgcgcca
gtctacctggcggcggtgctcgagtacctcaccgccgagatcctggagctggcgggcaac
gcggcccgcgacaacaagaagacgcggatcatccctcgccacctgcagttggccatccgc
aacgacgaggagctcaacaagctgctgggcggcgtgacgatcgcccagggaggcgtcctg
cccaatatccaggccgtgttgctgcccaagaagaccagcgccaccgtggggccgaaggcg
cccgccggcggcaagaaggccacccaggcctcgcaggagtactga

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