Sus scrofa (pig): 100522496
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Entry
100522496 CDS
T01009
Symbol
MYOM1
Name
(RefSeq) myomesin-1 isoform X2
KO
K24495
myomesin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100522496 (MYOM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
100522496 (MYOM1)
Domain-containing proteins not elsewhere classified [BR:
ssc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100522496 (MYOM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Ig_CD22
Ig_J_second
Ig_6
C2-set_3
Motif
Other DBs
NCBI-GeneID:
100522496
NCBI-ProteinID:
XP_003127892
Ensembl:
ENSSSCG00000003693
UniProt:
A0A8D0RH22
A0A480KXA1
LinkDB
All DBs
Position
6:103451206..103593093
Genome browser
AA seq
1656 aa
AA seq
DB search
MMSLPFYQKLHQHYDRSYRNKDLRTTMSQYQQEKRSSAIYTHGSTAYSARSSAAHRQESE
AFSQASTTSYQQQASRASELALSSSVSQKAASAYNYGYSRGRTDSSLMLEDYSSKLSPQI
KRARKGLLSGEEKENLPSDYMVPIFSGRQVHVSGITDTEEERIKEAAAYIAKRKLLASEE
GITAAKQSTVSKQSTSTLHQEEAFEKKSRKVAIREKAEHLELRKTLEETEAYHRKLNEDN
LLHAPEFVIKPRSHTVWEKENVKLHCSVAGWPEPRVTWYKNQVPINVHANPGKYIIESRY
GMHTLEINACDFEDTAQYRASAMNVKGELSAYASVVVKRYKGEFDETRFHAGVSTLPLSF
AVTPYGYASKFEIHFDDKFDVSFGREGETMSLGCRVVITPDIKHFQPEVQWYRNGAPVSP
SKWVQTHWSGDRATLTFSHLNKEDEGLYTIRVRMGDYYEQYSAYVFVRDADAEIEGAPAS
PLDVVCLDANKDYIIISWKQPAVDGGSPILGYFIDKCEVGTNNWSQCNDTPVKFARFPVT
GLIEGRSYIFRVRAVNKNGIGLPSRVSEPVAALDPAEKARLRSRPSAPWTGQIIVTEEEP
TEGIVPGPPTDLSVIEATQSYVVLSWKPPKQRGHEGILYFIEKCDAGAENWQRVNTELPV
KSPRFALFDLAEGKSYQFRVRCSNSAGVGEPSEATEVTVVGDKLDIPKAPSNIIPSRNTD
TSVVVTWEESKDAKELVGYYIESSVVGSGKWEPCNNNPVKGTRFTCHGLTTGQSYIFRVR
AVNAAGLSEYSQDSEAIEVKAAIGGAVSPAVWPELSDTPGGLTDFRGGMHDTSQPTFKKD
ALLGSKLNKASLPSSSHNLGQTEVRKVSETVQEELSPPPQKAAVKGKSKSDPLKKKKDLA
APSPPCDITCLESFRDSMVLGWKQPDKTGGAEITGYYVNYREVIDGVPGRWREANIKAIS
DEAYKISNLKENMVYQFQVAAMNIAGLGEPSAVSASFKCEEWTIAVPGPPHSLKYSEVRN
TSLVLQWKPPIHSGRTPVTGYFVDMKEANAKEDHWRGLNEAALKNTYLKVQGLKEGVSYV
FRVRAINQAGVGKPSDLAGPVVAETRPGTKEVVVSVDDDGIISLNFECDQMAPNSEFTWS
KDYVPTEDSPRLEVESKGNKTKMTFKDLGVEDLGIYSCDVTETDGIAASYLIDEEELKRL
LALSQEHKFPTVPIKSELAVEILEKGQVRFWMQAEKLSGNAKVNFIFNDKEIFEGPKYKM
HIDRNTGMIEMFMEKLQDEDEGTYTFQVQDGRATGHSTLVLIGDVYKKLQKEAEFQRQEW
IRKQGPHFAEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICT
LLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMTEVCKTIALSATDLKIQSTA
EGIRLYSFVTYYVDDLKVNWSHNGAAIKYTDRVKSGVTGEQIWLQINEPTPNDKGKYVME
LFDGKTGHQKMVDLSGQAYEEAFAEFQRLKQAAIAEKNRARVVGGLPDVVTIQEGKALNL
TCIVWGDPTPEVSWLKNEKLLASDEHCNLRFEAGKTAYFTISGVRTSDSGRYGLVVKNKY
GSETSDFTVSVFIPEEEARQGVEEPPKGHKGNKKSP
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctctgccgttttatcagaaacttcaccagcactatgaccgcagctacagaaac
aaggaccttcgcaccaccatgagccagtaccagcaggaaaagagaagctccgccatctac
acccatggctccaccgcctacagcgcccgctcctccgctgcccaccgccaggagtccgag
gccttcagccaggcatccaccacctcttaccagcagcaggcctcccgggcctctgagttg
gctctctcgtcctcggtcagtcagaaggcggcctcagcctacaattacggctactcccga
ggacgtacagattccagtttgatgttagaagattattcatccaagttgagccctcaaata
aaaagagccaggaagggccttctctctggagaagagaaagaaaatcttccaagtgactat
atggtgcccattttctcaggacgccaagtgcatgtcagtgggattacagacacagaagaa
gaaagaattaaagaagctgctgcttatatagctaagaggaaactccttgctagtgaagaa
ggaatcacagcagccaaacagtccacagtatccaaacagtctacatccacacttcaccaa
gaggaagcttttgagaagaagtcaaggaaagttgcaattcgagaaaaggcggaacacctg
gagctgagaaaaacattagaagaaactgaggcatatcatcgaaagttgaatgaagataat
cttctccatgctcctgaatttgtcattaaacctcgttcccacactgtttgggagaaagaa
aatgtaaaactacactgctctgtagctggctggccagaacctcgtgtcacatggtacaaa
aaccaggtgccaataaacgtccatgcaaaccctgggaagtatattattgaaagccgatat
ggaatgcacactctggagataaatgcatgtgactttgaagacaccgcccagtaccgggcc
tcggcgatgaatgttaaaggagagctttcagcgtatgcttcggttgtggtaaagagatat
aaaggagagtttgacgagactcgctttcatgcaggggtttccaccttgcccctcagcttt
gccgtgaccccttatggttatgcatccaagtttgagatccactttgatgacaagtttgat
gtgtcttttgggagagagggcgagacgatgagtctaggctgccgtgtagttatcactcct
gatattaaacatttccagccggaggtccagtggtacagaaatggagcacctgtttctcca
tcaaaatgggtacaaacacactggagtggagatcgggcgacactaacattttctcatctc
aacaaagaagacgaaggtctctacacaatccgtgtacgaatgggagactattatgaacaa
tatagtgcttatgtctttgttcgagatgctgatgcggagattgaaggagctccagcctct
cccttggacgtggtgtgcttggatgccaataaagattacatcatcatctcttggaaacag
ccagctgtggatggagggagtcctattctgggatatttcatcgataagtgtgaggtgggc
acaaataactggtcgcagtgcaatgacactcctgtgaagtttgctcgtttcccggtcact
ggattgatagaaggtcgttcttacatattccgagttcgagccgtgaacaaaaatggaata
ggtctaccctctcgagtttctgagcctgtggctgctctggatccagctgagaaagctaga
cttagaagtcgcccctcagcaccctggactggacagatcattgtcacagaggaggaaccg
acagagggtattgttcccgggccccccacagacctctctgtcatcgaggccacccagagc
tacgtggtgttgagctggaagccccctaagcagcgtggccatgagggtatcctgtacttt
atagaaaagtgtgatgcaggtgcggaaaactggcagcgggtgaacacagagctccctgtc
aagtctccccgctttgctctgttcgacttggctgaggggaagtcctaccagttccgagtc
cgctgttctaattccgcgggagtgggtgagccctcagaggcaacggaagtgaccgtagta
ggggacaaacttgacatccccaaggccccgagcaacatcatcccaagcagaaatacagac
acatcagtggtcgttacgtgggaggaatccaaggatgctaaagagctggtcgggtactac
atagagtcaagcgttgttggctctggcaagtgggagccctgcaacaacaaccctgtgaag
ggcacacgattcacttgtcatggattgactactggtcagagttatattttccgggtcaga
gcagttaatgcagctggacttagtgaatattcgcaggattcagaagcaatcgaagtaaaa
gctgctattgggggcgcagtgtctccagctgtgtggcctgaactgagtgatacacctgga
ggactaacagacttcaggggaggcatgcatgacacctcccagccaacctttaagaaagat
gctttgcttggtagcaaacttaacaaagcttcactacccagtagctctcacaacctgggc
caaacggaagtgaggaaagtaagtgaaacagttcaggaagagctttccccaccaccacag
aaggcagctgttaaggggaaaagtaagtctgaccctctgaaaaagaagaaggatctagcg
gcaccatctccaccctgtgatatcacttgtcttgaaagttttcgtgactcaatggttctt
ggatggaagcaaccggataagacgggaggggctgaaattacaggctattacgtgaactat
cgtgaagtaattgatggggtcccgggaagatggagagaagccaacatcaaagctatcagt
gatgaggcgtataagattagcaacctgaaggaaaacatggtgtatcagttccaagtggca
gccatgaacatcgctgggttgggagagccctcggcagtgagcgcaagcttcaaatgtgaa
gagtggaccattgctgttccaggaccaccacacagcctcaagtatagtgaagtcaggaat
acgtccctggttctgcagtggaagcctcccatccactcaggacggacccccgtcactggc
tactttgtggacatgaaggaagccaatgccaaagaggaccactggcgaggacttaatgag
gcggctcttaaaaacacgtacctgaaggtgcaaggcctcaaggagggtgtcagctacgtg
ttccgcgtccgagccataaaccaggcaggtgttggaaagccgtctgacctggctgggcct
gttgtggcagaaactcgtccaggaaccaaggaggttgtcgtaagtgtggatgatgatgga
atcatttccttgaactttgaatgcgatcagatggctccaaattctgagttcacctggtcc
aaagattacgtacccacagaggactcaccacgattagaggtggaaagcaaaggcaacaag
acgaaaatgaccttcaaagaccttggggtagaagacttgggcatttactcctgtgatgtg
acggaaactgatgggatagcggcaagctacttgatagatgaggaagaattgaagcgtcta
cttgctctcagccaagaacacaagttcccaactgtcccaattaaatcagagttagcagtt
gaaattttggagaaaggccaggtccggttttggatgcaggctgagaagctgtctggcaat
gccaaagtcaacttcatatttaatgacaaggaaatattcgaagggccgaaatataagatg
catattgaccgaaacaccggcatgattgaaatgtttatggaaaagctacaggatgaggat
gaggggacatatactttccaagttcaagatggaagagcaactggccattccactcttgtt
ctcattggcgatgtctataaaaagctccagaaagaagctgaattccagcggcaagaatgg
atcaggaaacaaggtccacatttcgctgagtatttgagctgggaagtgactggtgaatgt
aatgtgctattgaaatgcaaggtggcaaatattaagaaagagactcatattgtgtggtac
aaagatgagagggaaatatcagtggatgaaaagcatgactttaaggatggtatatgtacc
ctccttataacagagttttccaagaaagatgctgggatctatgaagttatcctgaaggac
gacagaggaaaagacaagagcagactgaagctcgtggatgaagcctttaaagaactgatg
actgaagtatgtaaaacaattgctctgtctgctactgacctgaagatacagagcacagct
gagggcattcggctgtactcttttgtcacttactatgtggatgatctaaaagttaactgg
tcccacaatggggccgctattaagtacacagacagagttaagagtggggtcaccggggag
cagatttggctgcagatcaacgaacccactccaaatgacaaagggaagtacgtgatggag
ctctttgatggcaaaactggacaccagaagatggtggacctttctggacaagcatacgag
gaagcctttgctgaattccagagattaaaacaagctgccattgccgagaaaaatcgtgct
cgggtggtgggcggtctccccgacgtggtcaccatccaggagggcaaggcgcttaatctc
acatgcatcgtatggggcgacccgactccggaggtgtcctggctgaagaacgagaagctc
ctggcctcggacgagcactgcaacctcaggttcgaggccggcaagaccgcctacttcacc
atcagcggggtgaggacctccgactcgggcaggtatgggctggtcgtgaagaacaagtac
ggctcggagaccagcgacttcaccgtcagtgtgttcatcccagaggaggaggcgcggcag
ggggtcgaggagcccccaaagggccacaagggcaacaagaagtccccgtga
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integrated database retrieval system