Sus scrofa (pig): 100522606
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Entry
100522606 CDS
T01009
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100522606 (AFF3)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100522606 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
100522606
NCBI-ProteinID:
XP_020943842
LinkDB
All DBs
Position
3:54135476..54730201
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AA seq
1270 aa
AA seq
DB search
MDSFDIALLQEWDLESLWGEDVLSQRNDSLVVEFQSSASRCRSVYEPDRNVLRRKERERR
NQETQQDDSTFNSSYSLFSEPYKTNKGDELSSRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGVPQAPVNKIDEHFVADPRAQTQPASVGSTTSTPAAVPGQQSKRGAMGWQKAGHPPS
DGQQRAAPQGSLRTLLGDGVGRQQPRTKQVCNVEVGLQTQDRPPAMTAKHSSGGHCVQNF
PPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSTEASVHCTSYRGGPAAKPESAR
AKGKLSKFGIPKQGEESRSGETNSCVEEIIREMTWLPPLSGIQAPGKVEPSKFPFPNKDS
QLVSSGHNNPKKGDAEPESPDNGTANTSSLGWLSPFTDKGNDALRGMLEDDLKLSSDEEE
NEQQATQRTALHALSDSAGVQQANGRASAPSSKGSSSGSSSSSGSSSSSDSESSSGSDSE
TESSSSESEGSKPPHYSSPEAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGPESNQYY
PPVKDDTQDCGKLPEVCPSSLRDKDIKSACKEEQRPRTANKAPGSKGVKQKSPPAAVAVA
VTAAPAAPPPAVPGAPAESAPPPARRSGGKKPTRRTERTSAGDGANGLRPEEPVAADALG
ASVAVPPEPTKPRPCGNGRTSHRKELRSAVTCEKRRTRGLSRIVPKSKEFIETESSSSSS
SSDSDLESEQEDYPLSKAQAVATAAPGNEQRLKEAANSIIGGGPRAPVGSINARTTSDIA
KELEEQFYTLVPFGRNELLSPLKDSEEVRSLWVKIDLTLLSRIPEHLPQEPGVLSGPASK
EAESAPPSHTADAPPEKALPKSKRKRKCDNEDDYREIKRAQGEKESSSRLTASGSSTLSA
NHCNMTINSLAIPINKNEKMLRSPISPLSDAAKHKYPGEDFTSSSRSNSSGLFPSNSSNK
KHKAESQLQTHAGDLPKAAHGNSESVLHKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRS
ADYFMQEAKRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETV
ELIRYAMRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKN
SSKAAQAPSPWGASGKSTGTPSPMSPNPSPTSSVGSQGSLSNANALSPSTIVSIPQRIHQ
MAANHVSITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGL
HWLRNSAHLA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacatagccctgctccaggaatgggacctcgagtcgctgtggggtgaa
gacgtcttaagccagaggaatgactctctagttgtggagtttcagtcgtcagccagcaga
tgcaggagtgtctacgaaccagatagaaatgtgttacggaggaaagaacgagagagaaga
aatcaggaaacacaacaggatgacagcacgtttaattcgagctactccctcttcagcgaa
ccctacaagactaacaagggggatgagctctccagccgcatccagaacactttaggcaat
tacgatgaaatgaaggactttttaacagatagatctaaccagagtcatctggttggtgtc
cccaaacctggggttcctcaggctcctgtgaacaagattgatgagcatttcgtggcagat
ccgagagcccagacccagcctgcatctgttggcagcaccacctccacaccagcagctgtc
cctgggcagcagagtaagcggggcgccatgggctggcagaaggctggccacccgccgtcc
gatggtcagcagagagcagcaccacagggctctctcaggaccttgctcggagatggggtt
ggcagacagcagccacggaccaaacaagtctgcaatgtcgaagtaggtcttcagacccag
gacaggccgcctgccatgacagccaagcacagcagtggtggccactgtgtccagaacttt
cctccatccctggcttcgaagcccagcctggtccagcagaagccaactgcctacgtgcgg
ccaatggatggccaagaccaggctcctgacgagtctccaaagctcaagtcgtccacagaa
gccagcgtgcactgcacatcgtacaggggcggccccgctgccaagccagagtccgccaga
gccaagggcaaactttccaagtttggcatccccaagcaaggagaggagagtagatctgga
gaaaccaacagctgtgttgaagaaatcattcgggaaatgacctggcttccaccactttct
ggtattcaagcacctggcaaagtggaaccaagcaaatttccatttccaaataaggactct
caactcgtttcctctggacacaataatccaaagaaaggtgatgctgaaccagagagtcca
gacaatggcacggccaatacatcctctctgggatggttatccccatttacagataaggga
aatgatgcactgagaggaatgctagaagatgaccttaagctaagtagcgatgaagaggag
aatgaacagcaggcaacccagagaacagctctccacgctctgtctgacagcgccggggtc
cagcaggccaacggcagggcctctgcaccctccagcaagggcagcagcagcggcagcagc
agcagcagcgggagcagttcctccagtgactctgagagcagctcgggatctgactcggag
actgagagcagttccagcgagagtgagggcagcaagcccccccactactccagccccgag
gccgagccagcgtcctctaacaagtggcaattggataaatggctgaacaaagttaatccc
cacaagcctcctattctgatccaaaatgaaagtcacgggccagagagcaatcagtactac
cctcccgtgaaggatgatacacaggactgtgggaagcttccagaagtctgccccagcagc
ctgagagacaaggacatcaagagcgcctgcaaggaggagcagagaccaaggaccgcgaac
aaggcccccgggagcaaaggggtgaagcaaaagtcccctcccgctgccgtggccgtggct
gtgaccgccgcccccgccgccccgccacccgctgtgcccggggcgcctgccgagagcgcg
cctccaccagcccggaggtcagggggcaagaagcccacccggcgcactgagaggacctcg
gccggcgacggtgccaacggcctccggcctgaggagcccgtggccgccgatgcgctgggg
gcgagcgtggcggttcccccggagcccaccaagcccaggccctgcggcaacggcaggacc
agccaccgcaaggagctgcgctcggccgtgacctgcgagaagcgccgcacgcgggggctg
agtcggatcgtccctaaatccaaagagttcatcgagacagagtcttcctcttcgtcctcc
tcctcagactcggacctggagtcagagcaggaggattatcccctgtccaaggcgcaggcg
gtggccaccgccgcccctgggaacgagcagaggctgaaggaggctgccaacagcatcatc
ggcggcggcccccgggcccccgtgggctccatcaatgccaggaccaccagtgacatcgcc
aaggagctagaagagcagttctacaccctggtccccttcggccgcaatgaactcctctcc
ccattgaaggacagtgaggaggtcaggtcgctctgggtcaaaattgacttgaccctcttg
tccaggatcccagaacacctgcctcaggagccgggggtcttgagtggtcctgcatccaag
gaagctgagagtgcacccccaagccacacagctgacgcgcccccagaaaaggctttgcca
aaatccaagaggaaacgtaagtgtgacaacgaagacgactacagggagatcaagagagcc
cagggagagaaggagagctcctcacgactgaccgcctctggcagcagtaccctgtctgcc
aaccactgcaacatgaccatcaacagcttggcaataccaataaataaaaatgaaaaaatg
ctccggtcacccatctcacccctctccgatgctgcgaaacacaaatacccaggcgaggac
ttcacttcctccagcagatccaacagcagtggtttgttcccttccaactcctccaacaaa
aagcataaggccgagagccagctgcagacccacgccggagacctcccgaaagcagctcac
ggcaactccgaaagcgttctccataagtcacgcccgcagacagagccgtggtctccgggc
tccaatggccacagggactgcaaaaggcagaagctcatcttcgatgatatgccacgcagt
gcagattattttatgcaagaagctaagcgaatgaagcataaagcagacgcaatggtggaa
aagtttggaaaggctctgaactatgctgaagcagccttgtcatttattgagtgtggaaat
gccatggaacaaggccccatggaatctaaatctccttacacgatgtattcggaaacagta
gagcttatcaggtatgctatgagactaaaaacccactcaggacccaatgccacgccagag
gataaacagctggctgcattatgttaccgatgcctggctctcctgtactggcggatgttt
cgactcaaaagagatcatgctgtaaagtattcaaaagcacttatcgactatttcaagaat
tcatctaaagctgcccaagccccatctccatggggggccagtggaaagagcactggaacc
ccatcccccatgtctcccaacccctcccccaccagctccgtgggatctcaggggagcctc
tccaatgccaacgccttgtcgccttcaaccatcgtcagcatcccgcagcgcatccaccag
atggcagccaatcacgtcagcatcaccaacagcatccttcacagctatgactactgggag
atggcggacaacctggccaaggaaaacagagaattcttcaacgacctggacctgctcatg
gggccagtcaccttacacagtagcatggagcacctggtccagtactcccagcagggcctg
cactggctgcggaacagcgcccacctggcatag
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integrated database retrieval system
