Sus scrofa (pig): 100522643
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Entry
100522643 CDS
T01009
Symbol
PLXNB1
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-B1
KO
K06821
plexin B
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100522643 (PLXNB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
TIG_plexin
Sema
PSI
PSI_Plexin-B
PSI_PlexinA-B
RasGAP
Motif
Other DBs
NCBI-GeneID:
100522643
NCBI-ProteinID:
XP_020926283
LinkDB
All DBs
Position
13:complement(31113910..31140133)
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AA seq
2134 aa
AA seq
DB search
MPALGPALLQALWAGWVLTLQPPPPAAFTPNGTYLQHLAQDPTSGTLYLGATNFLFQLSP
ELQLEATVSTGPVLDSRDCLPPVMPDECPQAQPTNNLNQLLLVSPGALVVCGSVHQGICE
QRRLGQLGQLLLRPERPGDTQYVAANDPAVSTVGLVAEGLAGEPLLFVGRGYTSRGVGGG
IPPITTRALWPLDPQAAFSYEETAKLAVGRLSEYSHHFVSAFAHGASAYFLFLRRDLQAQ
SRAFRAYVSRVCLRDQHYYSYVELPLACQGGRYGLIQAAAVATSSEVARGEVLFAAFSSA
APPTVGRPPSAASGPSGASALCAFPLDEVDRLANRTRDACYTREGRAEDGAEVAYIEYDV
NSDCAQLPVDTLDAYPCGSDHTPSPMASRVPLEATPVLEWPGVQLTAVAVTMEDGHTIAF
LGDSQGQLHRVYLGLGSDGHPYSTQSIQQGSAVSRDLIFDGAFEHLYVMTQNTLLKVPVA
SCAQHLDCASCLAHRDPYCGWCVLLGRCSRHSECSRGQGPERWLWSFQPELDCLRVAALS
PANISREERREVFLSVPDLPPLWPGESYSCRFGEYQSPALLTSSGVMCPSPDPSEAPELP
RGADHVSMSVELRFGDVVIAKASLSFYDCLAVTALYPSAQCQACVSSHWGCNWCVWQHLC
THKASCDAGPMVVSRQSPLLSPAPPARDAPTPFPPTTPKAMVSPAPDTLPVDTPATGAAS
EVPPGAQPSLLSPWGPWAGAGSMPASASTESPLHEDPPDPRPHNRPGATVPAPTAFGPMA
TPEDLLASHPSPTDAAALPPPAEASPEALPSAVPQDQPPGTAPATTFPGAAGSTKPALDW
LMREGGELPEADEWTGGDTPAFSTSTLLSGDGDSAEHEGPPAPLILLSSLDYQYDTPGLW
ELEEVTGGAGSCPCVESVQGSVLIPVHVQREVRLLGRNLRLFQDSPGDHECVMELEGREV
VVEARIECELPPDTRCHVTCQQHEFSYEALQPELHVGLFLRRAGRLRVDSVDGLHVVLYD
CSVGHEDCSRCQTARPQYGCVWCKGERPQCVAQEACGEAEAVVTQCPAPLIHSVEPLTGP
IDGGTRVTIRGSNLGQHVQDVQDTVRVAGVPCAVDVQEYKVSSSLVCITEASEEEVAGVV
TVEVPGRGRGVSEHDFAYQDPKVHSIFPARGPRAGGTSLTIHGSKLLTGRLEDIRVVVGD
QPCHMLLEQQVEQLRCETSPQPAPATLPVTVWFGATKRRLQHSQFEYTSDPNVTSAGPTK
SFLSGGREIWVRGQNLDVVQTPRIRVTVAPRLPQPGQGLGRRHRVIPETACSPGASCGGL
HFEEPCHVNSSQLITCRTPALPGLPEDPWVRVEFILDNLVFDFATLNPTPFSYEADPILQ
PLNPEEPSTPFRHKPGSVLSVEGENLDLAMSKEEVVAMIGDGPCVVKTLTRHHLYCEPPL
EQPLPRHHALREAPDALPEFTVQMGNLRFSLGYVQYDGESPVAFPMAAQVGLGVGTSLLA
LGVIIIVLIYRRKSKQALRDYKKVQIQLENLESSVRDRCKKEFTDLMTEMTDLTSDLLGS
GIPFLDYKVYAERVFFPGHQESPLHRDLGVPESRRPTVEQGLGQLSNLLNSKLFLTKFIH
TLESQRTFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQYVAKNPKLMLRRTET
VVEKLLTNWMSICLYTFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLNDNRLLR
EDVEYRPLTLNVMLAMGPGAGEAQGVPVKVLDCDTISQAKEKMLDQLYKGVPLAQRPDPR
TLDVEWRSGVAGHLILSDEDVTSEVQGLWRRLNTLQHYKVPDGATVALVPCLTKHALRES
QDYVPGERTPMLEDVDEGGIRPWHLVKPSDEPEPPRPRRGSLRGGERERAKAIPEIYLTR
LLSMKGTLQKFVDDLFQVILSTSRPVPLAIKYFFDLLDEQAQQHGISDQDTVHIWKTNSL
PLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADHKLGRDSPINKLLYARD
IPRYKRMVERYYADIRQTIPASDQEMNSILAELSRNYSGDLGTRVALHELYKYINKYYDQ
IITALEEDGTAQKMQLGYRLQQIAAAVENKVTDL
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctgggcccagctcttctccaggcactctgggccgggtgggtcctcaccctc
cagccccctccaccggcggctttcactcccaatggtacatatctgcagcatttggctcag
gatcccacctcaggcaccctctacctaggggccaccaacttcctgttccagctgagccct
gaactgcagctggaggccactgtgtccactggccctgtgctagacagcagggactgtctg
ccacccgtgatgcctgatgagtgcccccaggcccagcccaccaacaacctgaaccagctg
ctcctggtgagcccgggggccctggtggtgtgcggcagtgtgcaccagggcatctgtgaa
cagcggcgcctggggcaacttggacagctgctgctgcggccagagcggcctggggacacc
cagtatgtggccgcaaatgaccctgctgtcagcacggtgggactggtggccgagggcttg
gctggggagcccctcttgtttgtggggcgtggctacaccagcaggggtgtagggggtggc
atccctcccatcacgacccgggccttatggccactggacccccaggccgccttctcttac
gaggagacagccaagctggctgtgggccgcctctccgagtacagccaccacttcgtgagc
gcctttgcacatggagccagcgcctacttcctgttccttcggcgggacctgcaggctcag
tctcgagccttccgtgcctatgtgtcccgtgtgtgcctccgggaccagcactactactcc
tatgtggagttgcctctggcctgtcaggggggccgctacgggctgatccaggctgcagcg
gtggccacatcctcggaggtagcccggggggaagtgctctttgcagccttctcctcggct
gctccccctactgtgggccggcctccatcagcagcttccgggccatctggagcctctgcc
ctctgtgccttccccctggatgaggtggaccgccttgctaatcgcactcgagatgcctgc
tacactcgggagggccgtgctgaggatggggccgaggtggcctacatcgagtatgatgtc
aattctgactgtgcacagctgcctgtggacactctggatgcttatccctgtggttcagac
cacacgcccagccccatggccagccgtgtccccctggaagccaccccagttctggagtgg
ccaggggttcaactaacagccgtggcggtcaccatggaagatggacacaccattgctttc
ttgggtgacagtcaggggcagctgcatagggtctacttgggcctggggagtgatggccac
ccatactccacacagagcatccagcaggggtctgcagtgagcagagacctcatctttgat
ggggcctttgagcacctgtatgtcatgacccagaacacacttctcaaggttcccgtggcc
tcctgtgctcagcacctggactgtgcgtcttgtctggctcacagggacccatactgtggg
tggtgtgtgctcctcggcaggtgcagtcgccattctgaatgctcacggggccagggccca
gagcggtggctgtggagcttccagcctgagctagactgtctgcgagtggcagctttgagt
cctgctaacatcagccgtgaggaaaggagggaggttttcttgtcggtacctgacctgcca
cccctgtggcccggggagtcttattcttgccgctttggggaataccagagtcctgccctg
ctgaccagttctggtgtgatgtgcccttccccagaccctagtgaagccccagagctgccg
agaggagccgaccatgtctctatgagtgtggagctcaggttcggcgacgtggtgattgct
aaggcttccctttccttctatgactgtttggctgtcactgcactctacccgtctgcacag
tgccaggcctgtgtgagcagccactgggggtgtaactggtgcgtctggcagcacctgtgc
acacacaaggcttcgtgtgacgccgggcccatggtggtcagccgacagagcccgcttctc
tccccagcccctcctgcaagagatgcacccacccccttcccacccacaacccccaaggcc
atggtcagccctgctcctgatacccttcccgtggacactcctgccacaggcgcagcctcg
gaggtcccccctggggcccagccctccctgctcagcccctgggggccgtgggcgggtgct
ggctccatgcctgcctcagcctccacagagtcacctctccacgaggaccctcctgatccc
aggccccacaacagacctggagccactgtccctgcccccacggccttcggacccatggcc
acgcctgaggacctcttggcctcccacccatcgcccacagatgcagcagcgctgcccccg
cctgcagaggctagccccgaggccctcccctctgcggtaccccaggaccagccccccggc
actgctcccgccaccactttcccaggggccgctggctccacgaagcctgctctggactgg
ctcatgagagaaggcggcgagctgcccgaggcggacgagtggacggggggtgacacaccc
gccttctccacttccaccctcctctcaggtgatggagactcggctgagcacgagggtcct
cccgctcccctcatcctcctgtccagcctcgactaccagtacgacacccccgggctctgg
gagctggaagaggtgactgggggggcaggctcctgcccttgtgtggagagcgtgcagggc
tccgtgctgataccagtccacgtgcagcgagaagtgcggctcttgggcaggaacctgcgc
ctcttccaggacagcccaggagaccacgagtgtgtgatggagctggagggccgtgaggtg
gtggttgaggcccggatcgagtgtgagctgcctccagatacccggtgccacgtcacatgc
cagcagcacgagttcagctatgaggctctgcagccagagctccatgtggggctgtttttg
cgtcgggccggccgcctgcgtgtggacagtgtggatggactgcacgtggtgctctatgac
tgttccgtgggacatgaggactgtagccgctgccaaactgccaggccccagtatggttgt
gtgtggtgcaagggggagcgcccacagtgcgtggcccaggaggcctgtggcgaggctgag
gctgtggtcacccagtgcccggcacccctcatccactcggtggagccactgactgggcct
atagatggaggcacccgtgttaccatcaggggctccaaccttggccaacatgtgcaggat
gtgcaggacacggtcagggtggctggagtgccctgtgctgtggatgttcaggagtacaag
gtgtccagcagccttgtatgtatcactgaggccagtgaggaggaggtggcaggtgtggtg
acggtggaggtgccaggaagaggacgaggcgtctcagagcacgactttgcctaccaggac
ccgaaggtgcattccatcttcccagcccgaggccccagagccgggggcaccagcctaacc
atacacggctccaagctcctgactgggcggctagaggacatccgagtggtagttggagac
cagccttgtcacatgctgctggagcagcaggtggagcagcttcggtgtgagaccagccca
caacccgcgcctgcaacactccccgtgactgtgtggtttggggccaccaagcggaggctt
caacacagccagtttgagtacacatcagaccccaatgtcacctctgctggccccaccaag
agcttcctcagtggaggacgtgagatttgggtccgtggccagaatttggatgtggtacag
acaccaagaatccgagtgactgtggcccccagactaccgcagccgggccaggggcttggg
cggaggcaccgtgtgatcccggagacagcgtgctcccccggagcctcctgtggcggcctt
cacttcgaggagccatgccatgtgaactcctcccagcttatcacatgccgcacaccggcc
ctcccaggcctgcccgaggacccctgggtccgtgtggaatttatccttgacaacctggtc
tttgactttgcaacactgaaccccacacccttctcctacgaggccgaccccattctgcag
cctctcaaccctgaggaacccagcacaccattccggcacaagcctgggagtgtgctctct
gtggagggggagaatctggacctggcaatgtctaaggaggaggtggtggccatgataggg
gatgggccctgcgtagtgaagacgttgacccggcaccacttgtactgtgagccccccttg
gaacagcccctgccccggcaccatgccctccgggaggcacctgatgctttgcctgagttc
acggtgcagatggggaacctccgcttctccctgggctatgtgcagtatgatggcgagagc
cccgtggcctttcccatggcagcccaggtgggcttgggggtgggcacctctcttctggct
ctgggtgtcatcatcattgtcctcatatacaggaggaagagcaagcaggccctgagggac
tataagaaggtgcagatccagctggagaatctggagagcagcgtgcgggaccgctgcaag
aaggagttcacagaccttatgaccgagatgactgatcttaccagtgaccttctgggcagc
ggcatcccattccttgactacaaggtgtatgctgagagggtcttcttccctgggcatcaa
gagtcgcccttgcaccgggacctgggtgtgcctgagagcaggcgacccactgtggaacaa
gggctggggcagctctccaacctgctcaacagcaagctcttcctcaccaagttcatccac
accctggaaagccagcgcaccttctcggctcgggaccgagcctatgtggcatctctgctt
acggtggcgctgcatgggaagcttgagtacttcaccgacatcctgcgcaccctgctcagt
gacctggtggcccagtatgtggccaagaaccccaagctaatgctgcgcaggacagagact
gtggtggagaagctgctcaccaactggatgtccatctgcctctacactttcgtgagggac
tcagtaggggaacctctgtacatgcttttccgtggaattaagcatcaagtggacaagggg
ccggtggacagcgtgactggaaaagccaaatataccctgaatgacaaccgcttgctccga
gaggatgtggagtaccgtcccctgaccttgaacgtgatgttggccatgggccctggagca
ggagaagcccagggtgtgcctgtgaaggttctggactgtgacactatctctcaggccaag
gagaagatgctggaccagctttataaaggagtacctcttgcccagaggccagaccctcgc
accctagatgttgaatggagatctggggtggccgggcatctcattctttcagatgaggac
gtgacttctgaggtccagggtctgtggaggcgcttgaacaccctgcagcattacaaggtc
ccagacggagcaactgtggccctcgtcccctgcctcaccaagcatgctctccgggaaagc
caggattatgtccctggagagaggaccccaatgctggaggatgtggacgaggggggcatc
cggccctggcaccttgtgaagccaagcgatgagccggagcctcccaggcctcggagaggc
agccttcggggcggggagcgggagcgagccaaggccatccctgagatctacctgactcgc
ctgctgtctatgaagggaaccctgcagaagtttgtggatgacctgttccaggtgattctc
agcaccagccgccctgtgccactcgctatcaagtactttttcgacctgctggatgagcag
gcccagcagcacggcatctctgaccaggacaccgtccatatctggaaaaccaacagcttg
cccctgaggttttggatcaatataatcaaaaatccgcagtttgtgttcgacgtgcagaca
tctgataacatggatgcagtgctcctggtcattgcacagaccttcatggatgcctgcacc
ctggctgaccacaagctgggccgggactcccccatcaacaaacttctgtatgctcgggat
attccccgttacaaacggatggtggaaaggtattatgcagacatccgacagaccatcccc
gccagtgatcaagagatgaactccatcctggccgagctgtccaggaactactctggagac
ctggggacgagagtggccttgcatgagctctacaagtatatcaacaaatactatgaccag
atcatcactgccctggaggaggatggcactgcccagaagatgcagctgggctatcggctc
cagcagatcgcagcagctgtggaaaacaaagtcacggatctctag
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