Sus scrofa (pig): 100522756
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Entry
100522756 CDS
T01009
Symbol
SPATA13
Name
(RefSeq) LOW QUALITY PROTEIN: spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100522756 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100522756 (SPATA13)
Membrane trafficking [BR:
ssc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100522756 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
100522756
NCBI-ProteinID:
XP_020921131
Ensembl:
ENSSSCG00000009293
LinkDB
All DBs
Position
11:complement(2806674..3161372)
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AA seq
1230 aa
AA seq
DB search
MLRKNLSSRVASAPDLAVATTAEPDVHSRRESQAGGGFGEEGSHVGPRDTEARVALSRAA
LWPRAPGPENMTTAQNGHGRGAADPCPVSDPKDPGMGTYPGCRNGGCDGGGAGAREARLS
PARLLRLFSAGAGRTRADPERPRPAGLVVGSASTWNALASFRKMGSFKKLKSSVLQGIQN
REGWDAAKEGASEHGLGQPVPNGAXRPGPDGQVRPGPSDGSDPEEADDDGFARGALRSRS
IRRAYGXGRIRLLDPEPPAPEPAEREAPAREPERNGVCRRSKSTDSLTFLKKSSFRRKSA
SHLPEPQGPRRTLSGSSADSDSSGGAPARPRRWANPLRAQDLARMLRLGGSRPGGSGGAA
PGLRPHSRLHDDYSRRSAPGLADAPRARSPPASPLALQVPGGGSDEARPGGPITVEAELP
PGPPRPTTPKPPSPRSPGAASALSLSSVDSEERAEGPSHRDQGPGAFPDAAQATCDQGSE
DSGAGSQAPSSLGGAAPSEEKAEEVVPEESWRPASPPEEERTEAQRMTRRRWGSGTRARP
RPLSDYGQLVSRSVSIPEDSIATDPQREDTEEGVQQPSRASTDPADQTPAGGGPRGGPRR
RPISVIGGVGFYGSSQTEDAETLLPQPAARPPPPAHQVPPYKAVSARLRPCVFSQSTPIG
LDRVGRRRHMRASNISADGGAESSALVDDNGSEGDYSYEDLCRASPRYLQPGGEQLAVNE
LISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSAEKEAWFPASFVR
LRVNQEELAEAPGGPAGEQPEEGAGRSRHKHPESPQQMRTNVIQEIMKTERVYIKHLRDI
CEGYIRQCRKHTAMFTVAQLTTIFGNIEDIYKFQRTFLKDLEKQYNKEEPHLSEIGSCFL
QHQEGFAIYSEYCNNHPGACAELSGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQK
ICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIV
GWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRT
DMDAVELVDLEDGRDSAWNLGVRNAFKLVSRAGGEVHLFCAKKPEDKARWLQACRDERRR
VQEDHAMGMEISENQKKLAMLNAQKAGHGKSKGYSGCPAAPPHQNLRPVHQRHVTVPTSI
PQQQVFALAEPKRKPSIFWHTFHKLTPFRK
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaaagaacttgtcctcaagagtcgccagtgctccggacctggcggtggccaca
accgcggagcccgatgtgcacagccggcgggagagccaggctggcggcggcttcggggag
gaaggctcgcacgtggggccacgggacacggaggcgcgcgtggctctgagccgcgctgcc
ctctggccgcgggctcccggccccgagaacatgaccacggcccagaacggccacgggcgc
ggagctgcggacccctgcccggtctcggaccccaaggaccccggcatggggacctacccc
gggtgtcggaacggaggctgcgacggcgggggcgcgggcgcccgggaggcccggctcagc
ccggcccgcctcctgcgcctcttctcggcgggcgccggcaggacgcgcgctgacccggag
cggccccggcccgccggcctcgtcgtgggcagcgcctccacgtggaacgctctggcctcc
ttccggaaaatgggatctttcaagaaactcaagtcctcggtcctccagggaatccagaac
cgggaggggtgggatgctgcgaaggagggggcctcggaacacggtctggggcagcccgtc
cccaacggcgcgnnccggccaggccccgacggccaggtgcgcccggggccgtccgacggc
tcggaccccgaggaggccgacgacgatggcttcgcccgcggcgccctccggtcccgcagc
atccgccgcgcctacggcnctgggcgcatccgcctcctggaccccgagccaccggccccg
gagcccgcggagcgcgaggccccggcgcgagagcccgagcgcaacggcgtctgcaggcgc
agcaagagcaccgacagcctgaccttcctcaagaagagctccttccgacggaagtcggcc
tcgcacctgcccgagccccagggcccccgaaggacgctcagcggctcgtccgccgactcc
gacagctcgggcggggcccccgcgcggcccaggcgctgggcgaacccgctgcgggcccag
gacctggcccggatgctgcggctcgggggcagccggcccgggggctcggggggcgccgcg
ccggggctgcggccgcacagccgactgcacgacgactactcccgccgctcggcccccggc
ctggccgatgctcctcgcgcccgcagccctcccgccagccccctggccctgcaggtgccg
ggcggaggctccgatgaagccagacccggcggcccgataaccgtggaggctgagcttcct
cctggtcccccgaggcccaccacgcccaagccccccagccctcggagccccggtgcagca
agcgcgctgtcgctgagttctgtggacagtgaggagagggcagaggggcccagccacagg
gaccaaggtcctggggccttcccggatgctgcgcaagccacctgtgaccagggcagtgag
gacagcggtgccggcagccaggctccgtccagcctcggaggggcggccccttccgaagaa
aaggcggaggaggttgtgcctgaggagtcctggaggccggcctcgccccccgaggaagag
aggacggaggctcagaggatgaccaggaggaggtggggttccgggacgagggccaggccc
cggccgctctccgactacggccagttggtcagccgaagtgtgtccattcccgaggactcc
atcgccacagacccccagagagaggacacagaggagggagtccagcagcccagccgggcc
tccaccgaccctgcggaccagacccctgcggggggcggcccccgagggggccccagacgc
cgccccatttccgtgatcggcggggtgggcttctacggaagcagccagacagaggacgcg
gagacccttctgccccaacccgcggcccggccgcccccgccagcccaccaggtgccgccc
tacaaggcggtgtcggcccggctgcggccctgcgtcttctcccagagcacccccatcggg
ctggaccgcgtgggacgccggcggcacatgagagcatccaacatttctgcagacggaggt
gctgagtcgtcggccttagtggatgacaacggcagcgagggggactacagctatgaagac
ctctgtcgggccagcccccgatacctgcagccgggcggggagcagctggccgtcaacgag
ctgatcagcgatggcagcgtggtctgcgccgaggcgctctgggaccacgtgaccatggac
gagcaggagctgggcttcaaggcgggggacgtcatccaggtcctggaagcctcgcacaag
gactggtggtggggccgcagcgccgagaaggaggcctggttcccggccagcttcgtcaga
ctgcgcgtcaatcaggaggagctggcggaggcccccggcggccccgcgggcgagcagccg
gaggaaggcgcgggcaggagccgccacaagcaccccgagagcccgcagcagatgcgcacc
aacgtcatccaggagatcatgaagaccgagcgcgtgtacatcaagcacctccgcgacatc
tgcgagggctacatccgacagtgccgcaagcacacggccatgttcacggttgcgcagctc
accaccatcttcggaaacattgaggacatttacaaattccagagaacgttcctgaaagac
cttgagaagcagtacaataaggaggaacctcatctgagcgagatcggctcctgctttctc
cagcaccaagagggcttcgccatctactccgagtactgcaacaaccacccgggcgcctgc
gccgagctgtcggggctgatgaagcagggccgctaccgacacttcttcgaggcctgtcgc
ctcctgcagcagatgatcgacattgccattgacggcttcctcctgacgcccgtgcagaag
atctgcaagtacccgctgcagctggccgagctgctcaagtacaccacgcaggagcacagc
gattacaacaacataaaggcagcgtacgaggccatgaagaacgtcgcctgtttgatcaac
gagcgaaaacgcaagctggaaagcatagacaagatagcgcggtggcaggtgtccatcgtg
ggctgggaggggcaggacatcctggagcgcagctcggagctgatccactccggggagttg
accagggtcacccggcagggcaagagccagcagcggaccttcttcctgttcgaccaccag
ctggtggcctgcaagaaggacctgctgcggagggacgtgctctactaccggggccgcacg
gacatggacgccgtggagctggtggacctggaggacggccgcgacagcgcctggaacctc
ggcgtcaggaacgccttcaagctggtcagcagggcgggcggcgaggtgcacctgttctgc
gccaagaagcccgaggacaaggcgcggtggctgcaggcctgccgggacgagcgccggcgg
gtgcaggaggaccacgcgatgggaatggaaatttcagaaaaccagaagaaactcgccatg
ttaaatgctcaaaaggcaggacacggaaagtcaaaaggctacagcggatgccccgcggcg
cccccacaccagaacctccggccggtccaccagcgccacgtcacggtgcccaccagcatc
ccgcagcagcaggtgttcgccctggcggagcccaagcggaagccgtccatcttctggcac
accttccacaagctcaccccgttcaggaagtga
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