Sus scrofa (pig): 100523089
Help
Entry
100523089 CDS
T01009
Symbol
CALCOCO2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04137
Mitophagy - animal
ssc04140
Autophagy - animal
ssc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100523089 (CALCOCO2)
04137 Mitophagy - animal
100523089 (CALCOCO2)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100523089 (CALCOCO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100523089 (CALCOCO2)
03029 Mitochondrial biogenesis [BR:
ssc03029
]
100523089 (CALCOCO2)
Membrane trafficking [BR:
ssc04131
]
Autophagy
Xenophagy
Cargo receptors
100523089 (CALCOCO2)
Mitochondrial biogenesis [BR:
ssc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100523089 (CALCOCO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
OVT1
Zn-C2H2_12
bZIP_1
CCDC39
YabA
Ax_dynein_light
CENP-F_leu_zip
zf-Di19
CheW
Rod_CreS
Tropomyosin
SHE3
Motif
Other DBs
NCBI-GeneID:
100523089
NCBI-ProteinID:
XP_003131600
Ensembl:
ENSSSCG00000017543
UniProt:
A0A4X1UN75
LinkDB
All DBs
Position
12:25050008..25080230
Genome browser
AA seq
448 aa
AA seq
DB search
MEETIGEPPTSAVLLDHCHFSQVIFNSVEKFYVPGGDVTCYYTLTQHFIPRRKDWIGIFR
VGWKTTREYYTFMWVTLPTDLNSEAAKQQEVQFKAYYLPKDDEYYQFCYVDQDGVVRGAS
IPFQFRPENEEDILVVTTQGEVEEIEQHNKELRKENKELKDSCVSLQKQNSDLQAELQKK
QEELETLKSISKKLEETMKEQKDSWKTELLQLKEQSQKMSSENERMGVRVDQLQAQLSTQ
EKEMEKLVQRVQEKTEQVEQLKKENGQLFLNLTEQRAHQKTLEQTVEEMKQQRTTAAKKQ
QELTDQNFDLSKKLSENKIIYSTLQKEKERMEKENDLLKRENSRLLSYMGLDHDSLPYQA
PTSNPGGARRSPGLVYGNPYSGIQESSAPSLLSIKKCPTCKSDFGDDIFNHTLEQDVQSP
SLNCPICDKYFPAKEKQIFEDHVFCHTL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaagagacaattggagagcctcccacctcagctgtcttgctggaccactgtcacttc
tctcaggtcatctttaacagtgtggagaagttctatgtccctggaggggacgtcacatgc
tattacaccctcacgcagcatttcatcccacgtcgaaaggactggattggcatctttaga
gtggggtggaagacaacccgtgagtattacaccttcatgtgggttacattgcccactgac
ctgaacagtgaagcagccaaacagcaggaagtccagttcaaagcttattacctgcccaag
gatgatgagtattaccagttctgctatgtggatcaggatggtgtggtccggggagcaagt
atccctttccagttccgtccagaaaatgaggaggacatcctggttgtcaccactcagggt
gaggtggaagagattgagcagcacaacaaggagctgcgcaaagagaacaaggagctgaag
gacagctgtgtcagcctccagaagcagaactcagacctgcaggccgagctccaaaagaag
caggaggagctagaaaccctaaagagcatcagtaagaagttggaagagacaatgaaagag
cagaaggactcttggaagacagagctacttcaactgaaagaacaaagccagaagatgtcc
tcagagaatgagaggatgggagtcagagtggatcagcttcaggcccagctatcaactcag
gagaaagaaatggagaagcttgttcagagagttcaagagaagacggagcaggtggaacag
ctgaaaaaagaaaatgggcaactctttctcaatttaactgaacagagggcgcaccagaag
acgctcgagcagacagtggaggagatgaagcagcagagaactactgcagcgaagaaacaa
caggagttaacggaccagaactttgacctgtcgaaaaaactgagtgagaacaagattata
tatagtactctgcagaaagagaaagagagaatggaaaaagaaaacgatcttttgaagagg
gagaacagcagactgctgagttacatgggtctggatcatgactctctgccgtatcaagca
cctacttcaaatccaggaggtgcaagacgaagcccaggactcgtctatggaaacccatac
tctggtatccaagaaagttctgctcccagcctgctctccatcaagaaatgccccacctgc
aaatcagactttggtgatgacatttttaatcacactttggagcaggatgtgcagagccct
tctttgaattgtccaatttgtgacaagtacttcccagcaaaagagaagcagatctttgaa
gaccacgtgttctgccacactctataa
DBGET
integrated database retrieval system
