Sus scrofa (pig): 100523112
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Entry
100523112 CDS
T01009
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100523112 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100523112 (EXOSC2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100523112 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100523112 (EXOSC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
100523112
NCBI-ProteinID:
XP_003122286
Ensembl:
ENSSSCG00000005704
UniProt:
A0A8D0XQG4
A0A4X1TET0
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All DBs
Position
1:270748534..270757717
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AA seq
293 aa
AA seq
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MAMEMRLPVARKPLSESLGRETKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEEAGGFIANLEPVSLADREVISRLRNC
IVSLVTQRVMLYDTSILYCYEASLPHQIKDILKPEVMEEIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgaggcttcctgtcgctcgcaagcctcttagcgagagcctggggcgc
gagactaagaagcacctggtggtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatgggacctatatgggggaagagaagctcatcgcgtctgtggctggctcggtg
gagagagtaaacaagctgatctgtgtaaaagctttgaaaaccagatataatggtgaagtg
ggggacattgtagtggggagaatcacggaggtccaacagaagaggtggaaagtggagacc
aactccaggctggactcggtcctgcttctgtcatccatgaaccttcccggaggagagctg
aggagaagatcagcagaggacgagctggcgatgaggggcttcttgcaggaaggggacctt
atcagtgctgaggtccaggcagtgttctctgacggagccgtctctctgcacacgaggagt
ctcaaatacggaaaactgggtcagggcgttttggttcaggtttccccctccctggtaaaa
cggcagaagactcacttccatgacctgccatgtggtgcctcagtgattctgggcaacaac
ggcttcatctggatctacccaacgcctgagcacaaagaggaggaggcagggggcttcatt
gcaaacctggagcctgtctcccttgctgatcgagaggtgatttcccggctgcggaactgc
atcgtctcgctggtcacccagagggtgatgctgtatgataccagcatcctgtactgctac
gaggcatcccttccacatcagatcaaagacatcttaaagccagaagtaatggaggaaatt
gtgatggagacacgccagaggcttctggaacaggaggggtaa
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