Sus scrofa (pig): 100523207
Help
Entry
100523207 CDS
T01009
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100523207 (VPS53)
Membrane trafficking [BR:
ssc04131
]
Protein recycling
Others
EARP complex
100523207 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
100523207 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
hAT-like_RNase-H
Syndetin_C
COG3_N
COG5_N
MCPsignal
XhlA
Med11
FUSC
Snf7
ING
Motif
Other DBs
NCBI-GeneID:
100523207
NCBI-ProteinID:
XP_003131861
Ensembl:
ENSSSCG00000017812
UniProt:
A0A480L6G7
A0A8D2A5Z2
LinkDB
All DBs
Position
12:47141749..47291169
Genome browser
AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHRYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLIANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKPESPPASTNPFLEDEAAPEMEELAMEKGDSEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPSMDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLQEYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSE
VAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLIERINLSGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSTLELFRQRLPTPPSGPEGSSSLSLLAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggaattcgtggaggagctggaagccgtgctgcagctcacc
ccagacgtgcagctcgccatcgagcaggtatttccaagccaggatcctctagatcgagca
gatttcaatgctgtggagtatatcaacaccctgttcccaacggagcaatctctggcaaac
attgacgaagtcgtgaacaaaattagactgaaaataaggagactggatgacaatattcga
actgtcgtaagaggtcagacaaatgtggggcaggacggcaggcaggcactcgaagaggcc
cagaaagctattcagcaactctttgggaaaatcaaagatatcaaggataaggcagaaaaa
tcagagcaaatggtgaaagaaatcacccgagacattaagcagttggatcacgccaaacgc
cacctgaccacctccatcacaacgctgaaccacctgcacatgctggcgggcggcgtggat
tccctcgaagccatgaccaggcgaaggcagtatggagaagttgctaatcttcttcagggc
gtcatgaatgttctggagcacttccacagatacatgggcattccacagatccggcagctg
tctgaaagagtgaaggccgcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcatttccttcccagggtaccaagaggccgggaggaccgagcaatgtcctgagagat
gcgtgtctgattgccaatattttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctgtcagagtacctagtactttttcaagaaaaccaggatgttgcctgg
ctggacaaaattgacagacgctatgcctggatcaaacgccagctcgtggactatgaggag
aagtacggccggatgtttccgcgagagtggtacatggctgagaggatcgcggtggaattt
tgccacatcacaaggacggaacttgccaagatcatgcgtactcgagcaaaggaaattgaa
gtgaaattgcttctttttgctattcagagaacaacgaactttgagggctttcttgcaaaa
cgcttctctgggtgcaccctgaccgatggcactctgaagaaacccgagtctccacccgcc
tccaccaaccccttcctggaggatgaggcagcaccggagatggaggaactggcgatggag
aaaggcgattccgagcaaccaaagaagcctaaagccccagacaatccatttcacggcatt
gtttccaagtgttttgagcctcatctctacgtgtatattgagtcccaggacaaaaacctt
ggtgaactgatagatcggttcgtggccgatttcaaggcccaggggccccctaagcccagc
atggatgaggggggcgccgtgctccccagctgcgccgacctcttcgtctactacaagaag
tgcatggtgcagtgctcgcagctcagcaccggggagcccatgatcgccctgaccaccatt
ttccagaagtacctccaagaatacgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagcggcgggctgaccatcagcagcctcctcaaggagaaggagggctcggaa
gtggccaagttcacgctcgaggagctctgccttatctgcagcatcctgagcaccgccgag
tactgcctggccaccacccagcagctcgaagaaaagctcaaggagaaagtcgacgtcagt
ctgattgaacgaatcaacctgagtggagaaatggacacatttagcacagtcatctccagc
agcattcagctgctggttcaggatctggatgctgcctgcgaccctgccctgacggccatg
agcaagatgcagtggcagaatgtggagcacgtcggtgaccagagcccctacgtcacctct
gtcattcttcacattaagcagaatgtccccatcatccgtgacaacctggcttccacacgg
aaatacttcactcagttctgcattaaatttgcaaactccttcattcccaagttcatcaca
cacctcttcaagtgcaagccaattagcatggtgggcgcagaacagctgctgctggacacc
cactccctgaagatggtcctgctcgacctgccgtccatcggctcgcaggtggtgcggaag
gccccggccagctacaccaagattgtggtcaagggcatgacccgtgccgagatgatcctc
aaggtggtgatggcccctcacgagccgctggtggtgtttgtggacaactacatcaagctc
ctgacggactgcaacacagagaccttccagaagatcctggacatgaaggggctgaagagg
agcgagcagagcagcacgctggagctcttccgccagcggctccccaccccgccctccggg
cccgagggctccagctctctgtccctcctggctccgactccagaacaggaatcctctcgc
atccgcaaactggagaaactaattaaaaagcgactgtag
DBGET
integrated database retrieval system
