Sus scrofa (pig): 100523461
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Entry
100523461 CDS
T01009
Symbol
TRIM65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100523461 (TRIM65)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100523461 (TRIM65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
PRY
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-B_box
zf-RING_6
zf-RING_5
zf-RING_4
RING_XB3-XBAT31
zf-RING_10
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100523461
NCBI-ProteinID:
XP_003131250
Ensembl:
ENSSSCG00000017195
Vega:
OTTSUSG00000002255
UniProt:
A0A4X1V0V0
F1RW04
LinkDB
All DBs
Position
12:5523056..5528884
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AA seq
522 aa
AA seq
DB search
MAAQRLEDRLTCAICLGLYQVPVTLLCGHNFCRGCIQDWWGRHEKACPECREPFPAGAEP
RRNVALSGVVEELRARPAPGPGPGPDPGPGPDSDSGARCPRHGRPLELFCRTEGLCVCSA
CTVRECRLHERVLLDAERREREAQLRATLEVTQKQATKAESQLRELQQRSIQVQSSACTL
ASMVSGKFSRLLQALEMQRAMALKDIEAAKTQALEQARDEEQRLQGHLEALTHCDHRIHD
LLEQSDDCTFLQESQLLAPPGPLGPLTLPQWNEDQFGDLKESLSQLCGLLLEAGSPPVVP
AEAAAFDSMEAPGPLAPVLSPLCPLRRKLWQNYRNLTFDPISANRHLYLSQQDQQVKHCR
KPQGPDGPDSFELWQVQCAQSFQAGRHYWEVRASSHSVTLGVAYPELKRRKLGPHTDNIG
RGPTSWGLCIQEDRTQAWHNGVAQRLPGVSGRLLGMDLDLASGCLSFYSLEPKTQLLHTF
HAIFTRPLYPIFWLLEGRTLTLCHRPEAKPPPGLQVEAAGLS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagcggctggaggacaggctgacctgcgccatctgcctggggctctaccag
gtacccgtgacgctgctctgcggccacaacttctgcaggggctgcatccaggactggtgg
ggccgccacgagaaagcgtgccccgagtgccgggagccctttcccgccggcgccgagccg
cgccgcaacgtggctctcagcggcgtggtggaggagctgcgcgcccggcccgcgcccggt
cccggccccggccccgaccccggccccggccccgactccgactccggcgcgcgctgcccc
cggcacgggcggccgctcgagctcttctgccgcaccgagggcctctgcgtgtgcagcgcg
tgcaccgtgcgcgagtgtcgcctccacgagcgagtgctgctggacgccgagcgccgggag
cgcgaggcccagctgagagctacactggaggtcacccagaagcaggccaccaaggctgag
agccaactacgggagctgcagcagcgaagcatccaggtccagagctcagcctgcaccctg
gcatccatggtctctggcaagttcagccgtctgctgcaggccctggagatgcagcgggcc
atggctctgaaggacatcgaggcagccaagactcaggcgctggaacaggcccgggacgag
gaacagcgactgcagggccacctggaggccttgactcactgtgatcacaggattcacgac
ctcctggagcagtcagatgactgcaccttcctccaggaatcacagctcctggcgccccca
gggcctctggggccactgactctcccgcagtggaacgaagatcagtttggagacctgaaa
gagtcactgagccagctgtgtggcctcctcctagaagcggggagcccccccgtagtgcca
gccgaggctgctgcctttgactccatggaggccccaggtcccctggcaccagtcctgagc
ccgctttgtccactgcgaaggaagctctggcagaattatcgcaacctgacctttgaccct
atcagtgccaaccgccacctctacctgtctcagcaggaccagcaggtaaagcactgtcgc
aagccccagggcccagacgggccagacagcttcgagctctggcaggtgcagtgtgcccag
agcttccaggccggccggcactactgggaggtgcgtgcatccagccactcggtgaccctg
ggtgtcgcctacccggaactgaaaaggcgcaagctgggtccccacacagacaacatcggc
cgcgggcccacctcctgggggctctgcattcaggaggaccgcacccaggcctggcacaac
ggggtggcccagcgcctcccaggggtgtcaggacggctcctgggcatggatttggacctg
gcctctggctgcctcagcttctacagcctggagcccaagacccaactcctgcataccttc
cacgccatcttcacccggcccctctaccccattttctggctcctcgagggtaggaccctg
actctgtgccatcggcctgaagccaagccccctccagggctccaggtagaggccgcaggg
ctcagctga
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integrated database retrieval system
